Ppap006628.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- -
- Assembly
- GCA_000262795.1
- Location
- Scaffold43:1873-9343[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-07 0.00022 20.2 0.0 7 36 20 50 14 57 0.88 2 2 9.9 9.9e+03 -4.3 0.0 32 39 381 389 380 392 0.77
Sequence Information
- Coding Sequence
- ATGAGAAACTACGTAAGAAAGACAAATCGATTGCCCGTTCCGGAAAACCTCGTGCGTAAAGCACTGGAGGATATCATCAGTGGCAAAAAGAGTTTTCGCCAAGCTGCTGCATTTTACAATCTTAAAGCATCCACTCTCAGTTGGAGATTTAGAAACTTGAAATTCTACCAAAATGATACTAGCCAAAATCTCACAAATACGGGTCTTAGACTCACAGGAATGAACACAAAACAGTCCAGCCGCCAGGTGTTCACCATGGATCAAGAAAAGCTCCTGGCACAGCACCTAATGAAATGTTCTCAACTATGCTATGACCTCAATATGAGTCAGATAAGAGAATTTGCCTATTCTTTTGCCGTTTCTTTGAATCGCAAAGTTCCGGAGAGTTGGATGATAAATCAGAGTGCAGGACAAGACTGGGCAAGGTCCTTCATGAATAGGCACAGATACCTTCCTTTCGGAAAGCATTCGAATACATCAAATTCGGAAAGTTCATCTCAAAGTCTTCCAGATGATTATAACATGGATGCTTTCTACGAAAACTTGGGAATTATTCAGAGCAACACAAACACGACGAAGGAAACAGAAACAGGGAAAGATGAGGTTTTCTTAGATTACAGCATCGTCAAAGAGGAATACTCTATGCAGGAAGATGCTCCAGATTCATCCACAAATCAGAAAACTCTTGAGGAAACCCATAGGGAAGCCCTTCAATTCGTGATTAATGAATTGGAAAAGAAGAATCATAAATGTTCTGAGTGTGATCAAGAATTTTGTTACATGTCAGACCTCAAGAGGCACTCTGTTGTGCATACATCAGATAAATTGCACTGTCCTCACTGTCCAAGAGCATTTGTGCACCAAATGAGCTTGAAGAAACATTTAGTCAGTCATTCAGCTGCACAAGAACCTCAGCCATGTCGTATTTGTGGCAAAATGTTCAGCACTAGTCAATCTCTGAGGGCACATGGTGAAAGACATTCACTGGACAAGAAGTACGAATGTGAGAAATGCGGAAAGAAATTTACAGATAAGCAAGATTTGAAGAGACACATCCAGAGAATCCATCATGGAAAAAACTCATCAAAGCTCTCAGGAAAGACTTTCACATGCCATTGTGGCAAAACCTTCTACAACAAAACCCTCTATGACAGGCATAAGGTGACTCATAGTGAGATTAAGACCATTCCCTGTCCCATCTGCTCCAATAAATTCAAGAGTGTTCTACATTTGCGATCACATTTGTTGGTTCACAGTGATGAAAAACCATTTCAGTGTCGCGTCTGTAAGATGACTTTCAAGAAGAAATCCATTCTCAAGCAACATGCTACTACCCATACAGGATCTACGCCAAATTGTCCCTACTGCAGGATTCCTTTGAGGAGTGCTGTTGGAGTTAAGAAGCACATTGAGATTTTCCATCGAGGCCTTCCTGAGGACATCCCTGACAACTTCTCAGCAGATAATCCGATATCTTGCACTATTTGCAGTAAAGTCTGCAAAAATCTCGAAACCCTCAAGGCACACGTAAAGATTCATCCTGCaaaaaaaTCAAGTTCCTGCGAGATTTGTGAAAAAGACTTCATAGATGATGAAGCACTAAAAAGGCACCAAAAGCGCAAACATGAAAATTCTTCCACTCCGTTATTCTCTTGCGATATTTGTGGGAAGAATTTCGTCAAGAAGTATGGATTGATGAGGCACATGGAGACACATAAAAGCGAGAGACCACGGTTTTCTTGCAAAATCTGTGGAATTAAACATGTTTCCAAGTACAATCTGCAAAAGCACGAGTTAATGCACAACATCAATGAAGAAATTCTAGGAGACGAACATCACCAAGCAACCAAGATTAAGATTGAAGATACAGAAATGCCGACGGAGACTCAAGTTGAACTGGAATCTATCACAATAAAATCTGAGCCAGAGTAA
- Protein Sequence
- MRNYVRKTNRLPVPENLVRKALEDIISGKKSFRQAAAFYNLKASTLSWRFRNLKFYQNDTSQNLTNTGLRLTGMNTKQSSRQVFTMDQEKLLAQHLMKCSQLCYDLNMSQIREFAYSFAVSLNRKVPESWMINQSAGQDWARSFMNRHRYLPFGKHSNTSNSESSSQSLPDDYNMDAFYENLGIIQSNTNTTKETETGKDEVFLDYSIVKEEYSMQEDAPDSSTNQKTLEETHREALQFVINELEKKNHKCSECDQEFCYMSDLKRHSVVHTSDKLHCPHCPRAFVHQMSLKKHLVSHSAAQEPQPCRICGKMFSTSQSLRAHGERHSLDKKYECEKCGKKFTDKQDLKRHIQRIHHGKNSSKLSGKTFTCHCGKTFYNKTLYDRHKVTHSEIKTIPCPICSNKFKSVLHLRSHLLVHSDEKPFQCRVCKMTFKKKSILKQHATTHTGSTPNCPYCRIPLRSAVGVKKHIEIFHRGLPEDIPDNFSADNPISCTICSKVCKNLETLKAHVKIHPAKKSSSCEICEKDFIDDEALKRHQKRKHENSSTPLFSCDICGKNFVKKYGLMRHMETHKSERPRFSCKICGIKHVSKYNLQKHELMHNINEEILGDEHHQATKIKIEDTEMPTETQVELESITIKSEPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01192036;
- 90% Identity
- iTF_01192036;
- 80% Identity
- iTF_01192036;