Ppap005169.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- clz9_2
- Assembly
- GCA_000262795.1
- Location
- Scaffold2033:23688-25486[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-10 3.8e-07 29.0 0.0 8 41 92 124 85 128 0.80 2 2 5.3 5.3e+03 -3.5 0.0 7 15 431 439 427 442 0.80
Sequence Information
- Coding Sequence
- ATGGAATATATTTGTCCTTTTTGTGACCAAAGTTTTGCAAGAAAAGTCATGTTGTCATCCCATCTCAAAAGAAGTCACATTAAAAAGTGGACACCGAGTTCAGAAAAATTTCAGGAGCCATCTAATGAGGTTCAAGAAAAACCGCAGAGTCCTAGAAGCGAACAGGTTGAGCAGCCTAAAAAACCCATAAAAATTGTAAATTTTATCCAGAAAACAATGAAGCCTCGAAAACCTTTGAAGAGATTGGTCTATTCCCGGAAGAAGATTGTTGATGCATTTGATGCTGTGAAAGGAGGCATGCCTATCTTGAGAGCTGCACGTGAATACGGAATTCCCCGGTCAACTCTGCAGTACAAAGTGTCTGGTAAAGGAAATTTGAACACACTGGGAAGAGGAGGATATTACAGTGCTCTAGGTGACGAGATTGAGCATAAACTGGTCAACTGGATTATGCAATGTGCAAATTTTGGATTTCCTGTTAGTAAGAAAGCTATATATTCAGGAGTAGGAACCCTTATGAAAGAGACAAACGTACAGGTGAAATATTTCAAAGACAATCGTCCATCTTCTCGTTGGATCTACTCTTTTTTGAGACGCCACCCAGAAGTGCGCCaaaaaaaGACCGAATACGGAAACAAGGCAAGCGGTAAGATCACGGAACCTAAGATTCGTGCTTGGTTTTCGCAGATAGAAAATCAATTGGGAGAAAATGTTTACGTCCTTAAGGAATCACAAAGGGTATTCAACATGGATGAGACGGAATTTAACCTTTCTCTACAAGGAGAGGTTGTATTTGCTCCTGTGAATCATCACGCATTCAATGAATCTGAGCAGTCGGACAAGGAGACCCAAACAACCTTGTTTGCTGTAAATGCTGCTGGAGATTTCGCACCACCTTTGACAGTATTTAAATACGAGAGAATGCCACAGCAAGCAGCCACCTGCGCACCTACTGCAGATTGGAGTATAAGCAAGACGGATTCTGGATGGATAACTTCAGAATCCTTCTTCGACTACATTTCTAACGTGTTTCTGCCGTGGGTAAAGAAGCAAAATATTAAACTTCCCATCATTGTTTTCTTAGATGGTCACAAATCTCGCCTGTCTCTGTCTTTGAGTAAGTTTTGCGACGAAGAGGGTATAATATTGGTTGCGATCTACCCGAATTCAAAACATATTCTCCAACCACTGAACGTTGCTGTTTTCAAGCCTATGAAAGACAATTGGAAGAGAATAAAGAAAACATGGAAGGATGAATGTGGACATGAAATGAATAAGTTCGATGTACCAGCCGCTCTGCACATGATTATCTCAGATCAAAGTACGAGAGGAAATATCATATCGGGATTTCGAGCATGCGGAATCTCTCCGTACAATGCAGAAGCGATTGATTACAAGAAAGTCATTAAGAATAGGAAGGAGGAAGAAGAGGAATTATTAAGTACAGAAATCGATCCAAAAGTAAATGACGCCGTTCTTTTCTTGAGAATGCTGGAGGACAGAATTGATGTCTCTACACTGAAACAATTCAAAATGACAAGGATAAAGAACACACAATGGAAGGGAGAAACTGAATTGAAAAGTTTCTTCGAGTTTTGGAATGATTCTGTCTCTCAGGCTGAAAATCGAAGACTGATGCCAAGTCCTGTGCTGTCATCAGAGAGCGAATCTGAC
- Protein Sequence
- MEYICPFCDQSFARKVMLSSHLKRSHIKKWTPSSEKFQEPSNEVQEKPQSPRSEQVEQPKKPIKIVNFIQKTMKPRKPLKRLVYSRKKIVDAFDAVKGGMPILRAAREYGIPRSTLQYKVSGKGNLNTLGRGGYYSALGDEIEHKLVNWIMQCANFGFPVSKKAIYSGVGTLMKETNVQVKYFKDNRPSSRWIYSFLRRHPEVRQKKTEYGNKASGKITEPKIRAWFSQIENQLGENVYVLKESQRVFNMDETEFNLSLQGEVVFAPVNHHAFNESEQSDKETQTTLFAVNAAGDFAPPLTVFKYERMPQQAATCAPTADWSISKTDSGWITSESFFDYISNVFLPWVKKQNIKLPIIVFLDGHKSRLSLSLSKFCDEEGIILVAIYPNSKHILQPLNVAVFKPMKDNWKRIKKTWKDECGHEMNKFDVPAALHMIISDQSTRGNIISGFRACGISPYNAEAIDYKKVIKNRKEEEEELLSTEIDPKVNDAVLFLRMLEDRIDVSTLKQFKMTRIKNTQWKGETELKSFFEFWNDSVSQAENRRLMPSPVLSSESESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -