Ppap002142.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- -
- Assembly
- GCA_000262795.1
- Location
- Scaffold48728:13165-15792[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-11 4.7e-08 31.9 0.0 5 35 17 46 14 54 0.89 2 2 3.5 3.5e+03 -2.9 0.0 7 19 359 370 359 372 0.77
Sequence Information
- Coding Sequence
- ATGAAGCCTCAAAAGCCTTCGAAAAGATTACCCCATTCTCAGAAGAAAATTGAAGATGCAATTGGTGCTGTTAAGAAAGGTATGCCTGTGTCAAGAGCTGCGAGGGAATATGGAATTCCTCGATCAACTCTCCACTATAAATTGTCTGACAAAGGAAGACTGAATACACTGGGAAGAGGAGGAATTTATAGTGTTCTAGGCGACGAGATAGAGAAAAAACTGGTTGATTGGATAATTCAATGCGCCAACTTTGGATTTCCTATTAGTAGGGAAACTTTGTATTCTGGGGTAGAAACCCTCTTGAAAGAGACAGAAGTACAGGTGAAATACTTCAAGAATAATCGTCCCTCGGATAAATGGATTTACGCTTTTTTGAGACGCCACCCAGAGGTTCGCCAAAAGAAGGCTGAATATGTGAACAAGGCACGCGGCAGTGTCACGGAAGCCAAAATTCGTACTTGGTTTACGCAGATTGAAAATCAATTGGGAGAAGACTTCCACATCCTCCAGGAATCACAAAGAGTATTCAACATGGATGAGAGTGGATTTAACCTTTCTCTGCAAGGTGAAGTTGTAATTGCTCCTTTGAATCACCACGCATACATTGAATCTGAGCACTCGGATAAAGAAACCCAAACTACATTGTTTGCAGTAAATGCTGCTGGAAATTTTGCTCCACCTTTAACTATATTTAAATACGAGAGATTGCCCCAGCAAGCTGCTACCTGTGCGCCTACTGCAGATTGGGGTATAGGTAAGACAGAGTCGGGGTGGATGACCTCTGAGTGCTTTTTCGAATATATCGCTAATGTATTTTTGCCGTGGGTGAAGAAGCAAAATATACAGCTTCCGATAATCGTTTTCTTAGATGGTCACAAATCGCATCTGTCTTTGCCTTTGAGCAAGTTTTGTGCTGACGCAGGTATAATATTGGTTGCGATCTATCCTAACTCAACTCATATTCTTCAACCACTGGATGTGGCCGTTTTTAAGGCTGTGAAAGCTAACTGGAGGCGAGTAAAGACCAAATGGAGGATTAAATTTGGACACGAACTGAATAAGTTTAATGTCCCAGCCGCCCTTCACATGATTATCTCAGATCAAAGTATGAGAAAAAATATCATATCTGGATTTCGGGCCTGTGGTATCTTTCCATTTAATCCTGACGCAGTTGATTACACTAAAATCATTAAGAGGAAGGAAGTAGAAGTCTTGGAAAATAATCACACTGTTGAAATTGACCAGGAAGTAAATGAAGCAACCGTTTTCTTAAAAATGTTGGAGGATAGAATTGATAGCTTCACACTGCACCAATTTAAAGTAACAAAGATGGAGAACACACACTGGAAGGGACAAATTGAATCGAAAAATTTGTTCGAGTTGTGGTGTAAATCTGCCGCTCtggctgaaagacaaatgcggatgacaagtcctttgctatccccagacagtaactctgtggcagaagatcctatgcggatggtaagtcctttcctgtcaccaggcagtgactctgtggctgaagatacaatgcggatgggaagacctttgctgtcaccaaacagtcactctgtggctgaagatacaatgcgaattgcaagtcctttgcggtcacaaagcagtgactttttgactgaagattcaacgctgataacaggacctttAATGCTTCTGGACAGCAATTCTACTGTCATCACGATTGAAGATGGCAATGAAGAAAATGTCTCACTTGAAGAAAATGTTTGGTTTATTCCTAATACGAATTTCCAGAATGAATTGATTTCAACAGAATCACTTCCTCCAGAACCCATTCCCACATCCTCGAAGAAGAGAAGGGTTTCCGAAATTCTTCAGGATGTAATTAAATGGCCAGAAGAGACGAAAAAATCTAAGCAAGTGAGGCGAAAGGAGTTGACTCCAACTGTGGTAACATCTAAAGTATGGATAGAAATGAATGAAGCCAAACAATCTgagaaatttgaaatagagaaagaaaaggaagagcgaaagaaagagcgtgaagagaagaaaagaatcatgaacgaagaaaaagctaaaaagaagatgctgcaggatatgaagaagtcggaaaaaattaaaaagaaagcaggaaaaggttgtaaaaaggccaagaattaa
- Protein Sequence
- MKPQKPSKRLPHSQKKIEDAIGAVKKGMPVSRAAREYGIPRSTLHYKLSDKGRLNTLGRGGIYSVLGDEIEKKLVDWIIQCANFGFPISRETLYSGVETLLKETEVQVKYFKNNRPSDKWIYAFLRRHPEVRQKKAEYVNKARGSVTEAKIRTWFTQIENQLGEDFHILQESQRVFNMDESGFNLSLQGEVVIAPLNHHAYIESEHSDKETQTTLFAVNAAGNFAPPLTIFKYERLPQQAATCAPTADWGIGKTESGWMTSECFFEYIANVFLPWVKKQNIQLPIIVFLDGHKSHLSLPLSKFCADAGIILVAIYPNSTHILQPLDVAVFKAVKANWRRVKTKWRIKFGHELNKFNVPAALHMIISDQSMRKNIISGFRACGIFPFNPDAVDYTKIIKRKEVEVLENNHTVEIDQEVNEATVFLKMLEDRIDSFTLHQFKVTKMENTHWKGQIESKNLFELWCKSAALAERQMRMTSPLLSPDSNSVAEDPMRMVSPFLSPGSDSVAEDTMRMGRPLLSPNSHSVAEDTMRIASPLRSQSSDFLTEDSTLITGPLMLLDSNSTVITIEDGNEENVSLEENVWFIPNTNFQNELISTESLPPEPIPTSSKKRRVSEILQDVIKWPEETKKSKQVRRKELTPTVVTSKVWIEMNEAKQSEKFEIEKEKEERKKEREEKKRIMNEEKAKKKMLQDMKKSEKIKKKAGKGCKKAKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -