Ppap010076.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- -
- Assembly
- GCA_000262795.1
- Location
- Scaffold634:50452-51495[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-13 3.3e-10 38.8 0.0 2 45 62 105 61 105 0.92 2 2 0.072 72 2.5 0.6 4 20 201 216 200 216 0.91
Sequence Information
- Coding Sequence
- ATGAATCATTGCGATATTTCTTTGCAGAATGTGAAAAATGAGGAACCCCATTCGCCGTATACGGACAAATCTTTCGAAGATGACACTATGGAATCCCCACAGAACTTCTCAGGAGACTCTCGTATTGCCCCATATGTTCCACAGCAACAAAAGCCCGAGTGGAAGCGATATAAGCAGTACACGAGGAATGATATCCTCTCAGCGATAGAATGTGTACGCAATGGGATGAGTGCGTTACAGGCGTCTAGGAAATTTGGAGTGCCTTCACGCACACTCTACGACAAAGTCAAGAAACTAGGAATAACGACAGGGAGACCAATGAACCGCACTATCAAACGAAGCCCTAGCAATGGTCCTAGCTCAGCTTTCCCATACGGTATCAGTGGAACAACGACACCCTATTCCCATCACTCCGGAGGTCAAGATGGAACTTCAATGTCTCATCAAGGCCTCGGGGATGAAAGGGATAGGGAACAGGCTCATCATCTGCCGCCTACAATTCCTCATCCAGCAGCAGCCTTACTCGATGCCACATTCTTGCAACAAGCCTTGGAAGCTCGCGGAGGAGATATTGCCGGAAGAGAAGCATTACACGCCATGGCCTTTGCTGCGGCAGCCCATGCGGCTGTCAATGGAATTTCTACCAGTCCTGGAACTCATGGAACAGCAAGATCTCCAAGTCCTAGCCACTTTATCAAATACATGAGACGCTCGAGAACTCCACCTGACAACGACAGGGACAACCATCATGGACCAGACGAAGACTACAGAGCTGAAGATCTGTCGATGGTGAAAAAAGAGATGGCATCTCCATCAGGGGCCTCAACACCTCTCCCTCAGGGACCTTCACATCATTCTCCAATGTCACGGGACGTCTCACCAGCGCCACCCGTGTCTCCACCGCACTCACCACCAGGACCACCAGTACCCAGTCAGGGTGTCATCGTGCCACCACTCACTAAAGTATCCCCCACGCTCAAGGACCCTTTTCTGGAAGAACGACAAAGGGAAGCGTCTCCTATGAATGACGAACAGCACGACTAG
- Protein Sequence
- MNHCDISLQNVKNEEPHSPYTDKSFEDDTMESPQNFSGDSRIAPYVPQQQKPEWKRYKQYTRNDILSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTIKRSPSNGPSSAFPYGISGTTTPYSHHSGGQDGTSMSHQGLGDERDREQAHHLPPTIPHPAAALLDATFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGISTSPGTHGTARSPSPSHFIKYMRRSRTPPDNDRDNHHGPDEDYRAEDLSMVKKEMASPSGASTPLPQGPSHHSPMSRDVSPAPPVSPPHSPPGPPVPSQGVIVPPLTKVSPTLKDPFLEERQREASPMNDEQHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -