Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_000262795.1
Location
Scaffold3905:10808-13995[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-27 4.8e-24 83.9 0.0 1 89 297 383 297 383 0.96

Sequence Information

Coding Sequence
ATGCAGCAAGTGGACGATCCCCCGTATTTGTCTGTGGGCACGGAGGTTAGCGCTAAATACAAGGGGGCTTTCTGCGAGGCAAAAGTGCGCAAAGTGGTGCGGAACATAAAATGCAAGGTGGCGTACAAACAGGGCCTCGGTTCCGGAACTGTCTCCGATGATCAGATCAAAGGGGGCTTGCTGCGTGTCGGTGCCACGGTGGAGGTGAAGCATCCGGACAGGAGGGAATTTGTCGAGGCCACAATCACCAAGATACAGGATTGCTCGCAGTATACTGTTGTGTTTGACGATGGGGACATTACGACACTCCGGCGGAGTGCACTGTGCCTCAAGAGTGGTCGGCATTTCAATGAGAGTGAGACACTGGATCAGTTGCCACTGACGCATCCGGAGCACTTTGGGAATCCCGTTGTGGGTGGCCGTCGGGGCAGGAGATCGAGGCAAATGCAGGATGACAGTTCGGATGATGAGGAAGATGTGGAGAGTACCAAACCGACGCCACATGAGAAGGAGGAGAATATCGGGAAGGTGGTTTGTGTGGAGAGTACGGACACCAAGAAGAAGTCACAGAAGGAAAATTGGTTTCCGGGTCTTGTGGTGGCACCTACGGCTCAGGACACGGTTCGGATACGCGTGAAGGATGAGTATTTGGTGAGATCGTTTAAGGACGGTAGGTACTATACGGTGCCCAAGAAGGAAGCCACCCAATTCACGCGGGAACAGGCCCAAAAGCAGGATGGCGTGGCTGTTCAGGCGGCTCTTGAGTACCTGGACAACAATACCCTGCCACCCCATTGGGACAGGGATGCCTTGTTTGGGATATCTGCGAGTTCCAGTGACTACGAGCAGGAATTCGATTCGGATAGTTCGGATGATGAGCCACGGGAGGAGAAGGATCATTTTGTGGCTCAACTGTACAAGTACATGGATGACAGAGGGACTCCCCTGAACAAGGGACCATCCATTGTCAACAGGGACATCGATCTCTATCGTCTGTTTCGAGCTGCCCAGAAACTCGGTGGCTACAATCGGGTCACGAGTCAGAATCAGTGGAAAGCCATTGCACTCAGGCTGGGATTTGTACCGGCTACCACGAGTATCACGAATCTCGTGAAGCAGGCCTATAAGAAATTCCTGCAGCCTTTTGAGGAGTTCAACCGGAAATTGGGATGTACAATGGTGGCACATCCGCGTGCAAATAGGATCAAGGGCAGGAGTCTCGTGAGGGCAAATTCGGTGGCATCGCCAAAACCTGTGGATCCCAAGGAGACCAAATCTGTCTCTTCGACAGCAACCGATGACTTTGACAACAGTGAATCGAGCTCTGAGCCAACCAAGACCAAAAGGAAGTTGTCCACAAATAGCGGCAATGGCAGTGGAGTGGTCAGGACAAAAGCTGCTGCTGCTGTCGTGGAGAAGATTGAGGAGAAGCTGCCCAAGGAGGAGGAACCTGAACCGCCTCCGGTCAAGCCGACAACGGTCAAGGGAAAGGCCAAAGTGGAAAAAGAAGTTAAGGATGAGGCACCACCGTCAAAGGCAGCCAAAGCTGCTGTTGCAACTCCCAAAGAGGATTCCGGGAAGGCACAAGAAACTGCAGTGACTCCCACAAATACCGCCAAGAAGGACAAACCACCGTCCAAGGTGAAGAATGAGGAGAAACGGGGCAGGAAGAAGAAGGATTCCGAAGCTGGTGATAAGACTGATGCCAAGGAGACAAAGAGTGATTCCAAGAAATCCACAGAATCCACAGATGATTTTCCCGTGGAAGTTGGAGATAAACTCAATGTGTACTATCACGAGGAGACTGTCACGTACGAAGCAAAAGTGATTGAGAAGTCCACACAGAATGGCAATCCCATCTTCCTGGTCCATTACACCGGATGGAATACGCGCTACGATGAATGGGTGCCCAAGGACAGAATCGTGGAGAATCTGACCAATAAGCAGAAACGCACAAAAACCACCACGGCAAAAAGTTCACCGGCTGTTGAGAAAGCTCCTGCTTCGATGCCACCGACAAAATCTGCAGCTAAACGGGGTCGAGGAGGATCCAGGAGTGATTCCCAGCCACCCAGATCCACAACACCATCATCCATCACGTCAAATTCCAGCCGGACCAAGAGTCCAGCCACTCCAGCTCAACGGAGAACCACACGAGGGCAGCCACAGAATCTCCGGAGGACATCCAATAACACAGACATCTCTTCCCTTCACACGGAATCCGACACGGATTCCGATGAACCCGTCAAAAAACCCAGTCGAGCTACAACTTCTTTCACAATTCCCGGAAAAGCCGGTTCTGGCACAGTTCCGCAACTTCCAGAGGCCATAGTCCCCGTAGTGGCCATGAGAAATGTCGGCAAGGAACTACAGGCCCTCAAAGACGAAGAAGAAGCCACCAAGGGCAGGGACTACGATCTCAATCAGATTCGGTCTGAAATGAAAGGTTTCAAGGAGATGAAGTCTCCATCGCCCGAAGCAGCAGAACAATCTCCAACATCCAGTTCACATCATGATCACAAGACCAGCttnnnnnnnnnntCACCACGACAACTTCATCATCGGAATGTGATTCCTTCGGTGATGATGATTCCCAATCATCGGAAAAATTGA
Protein Sequence
MQQVDDPPYLSVGTEVSAKYKGAFCEAKVRKVVRNIKCKVAYKQGLGSGTVSDDQIKGGLLRVGATVEVKHPDRREFVEATITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQMQDDSSDDEEDVESTKPTPHEKEENIGKVVCVESTDTKKKSQKENWFPGLVVAPTAQDTVRIRVKDEYLVRSFKDGRYYTVPKKEATQFTREQAQKQDGVAVQAALEYLDNNTLPPHWDRDALFGISASSSDYEQEFDSDSSDDEPREEKDHFVAQLYKYMDDRGTPLNKGPSIVNRDIDLYRLFRAAQKLGGYNRVTSQNQWKAIALRLGFVPATTSITNLVKQAYKKFLQPFEEFNRKLGCTMVAHPRANRIKGRSLVRANSVASPKPVDPKETKSVSSTATDDFDNSESSSEPTKTKRKLSTNSGNGSGVVRTKAAAAVVEKIEEKLPKEEEPEPPPVKPTTVKGKAKVEKEVKDEAPPSKAAKAAVATPKEDSGKAQETAVTPTNTAKKDKPPSKVKNEEKRGRKKKDSEAGDKTDAKETKSDSKKSTESTDDFPVEVGDKLNVYYHEETVTYEAKVIEKSTQNGNPIFLVHYTGWNTRYDEWVPKDRIVENLTNKQKRTKTTTAKSSPAVEKAPASMPPTKSAAKRGRGGSRSDSQPPRSTTPSSITSNSSRTKSPATPAQRRTTRGQPQNLRRTSNNTDISSLHTESDTDSDEPVKKPSRATTSFTIPGKAGSGTVPQLPEAIVPVVAMRNVGKELQALKDEEEATKGRDYDLNQIRSEMKGFKEMKSPSPEAAEQSPTSSSHHDHKTSXXXXSPRQLHHRNVIPSVMMIPNHRKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-