Parg007977.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- stc
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000037.1:8668916-8672025[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 1.2e+04 -4.0 1.6 15 19 315 319 314 319 0.81 2 15 0.17 1.1e+03 -0.7 0.6 4 10 348 354 347 361 0.92 3 15 1.9e-05 0.12 12.0 17.9 4 19 362 377 354 377 0.89 4 15 8.9e-07 0.0055 16.2 9.2 1 19 413 431 413 431 0.97 5 15 0.44 2.7e+03 -2.0 0.5 1 5 440 444 440 449 0.85 6 15 3.6e-09 2.2e-05 23.8 14.6 1 19 471 489 471 489 0.98 7 15 7.9e-05 0.49 10.0 14.6 4 19 535 550 528 550 0.88 8 15 0.0063 39 3.9 9.3 1 11 590 600 590 601 0.96 9 15 0.19 1.2e+03 -0.8 0.9 4 10 605 611 604 611 0.89 10 15 2.1e-08 0.00013 21.4 16.5 1 18 617 634 617 635 0.97 11 15 2 1.2e+04 -4.5 1.1 6 10 664 668 664 668 0.88 12 15 0.25 1.6e+03 -1.2 8.0 10 18 682 691 671 692 0.89 13 15 2.1e-07 0.0013 18.2 14.1 1 15 728 742 728 754 0.93 14 15 0.0004 2.5 7.7 11.9 4 16 762 774 760 779 0.88 15 15 0.19 1.2e+03 -0.9 0.8 7 12 794 799 788 799 0.70
Sequence Information
- Coding Sequence
- ATGGGAGATTTTAACAAGAACGCCCCGCCGGGGCAGCCAAATGAGCAGATGTACGTGAATTTCGACCAATTCATCGCTCAAAACAACTTCCGACAGTTCCAACAATTCCCATCTATGGAGTTCTACAACACCAATCACTACTATTCCACTCCGGCTCAGGGATTCTCCGGTCACAACACGCAGATGCACAACACGATGTATCAGCCTTTCGCACCTTTTTCCAACTTCATCGCCGAGAACTCATCTCTCACTGCCACTGCCAGTGAGTTCGTGCCTCGCGGGGCCACGGCGAGTGGGCCGGAGGAGCCGCCGGAGCCGCCGCCAGTGGAGCAGAAGGAGTCTCGCGCCGAGGAGACAACTAGGCGCACGAATGAGGCGGATGCGATGCTCTCGGAGCTGAACATCAACGGGCATCAGAGTCAGACGGGAGCCATTCGCAAGCAATGGCGCACAGAGAATCCACGCCGAGAGTATCGCCGGAATCAGGAAGCCGCGCCGAGATTCCAGGCACGCAATCGGCCTGCTCAGCATCACCAGGAGTGGCAGGAGGTGGAGTATTCCAGTCGCAGAGGCGCAAATGGGAGGCAGAAGTTTGCATCTGGCGGTGAGAAGCGTCAGAAGTGGTCGAAGAATAGGCAAGACAAGGAGAATGGTCACTCCGAGAGCATTGAGGAGGCGGATGAAGCGAGGAAGCGCAGGAATCACCAGGATTTCCGGCCAAATCGCAATCTGAAGCCATCGGTGGCAGTGGAGGGTGAGCCTTGCTCGCAGCGGGAGAAGCTGGAGCGCGAGATTGACACGGGAAAGCTGGAGTGTCTGGTGTGTTGTGAGAAGATCAAGCCCTTCCATTCGGTGTGGACGTGTGGGAATTGCTATCACATCTTGCATCTGAACTGCATCGTGAAGTGGGCCGCCAGCTCGAAGAGTGAGTCGGGATGGCGTTGCCCGGCGTGCCAGAACATCACGCGCGCCGTGCCGAGGGACTATCTGTGTTTCTGCGGGAAGCAGAAGAATCCGCAGTACAACAGGAGCGACGTGGCGCACAGCTGCGGTGATGTCTGTGGCAGGAGTGAGAATTGTCCGCATCCGTGCACACTTTTGTGCCACCCGGGACCCTGTCCGCCCTGCCAGGCGTCCGTGCAGCGCAGCTGCGGCTGTGGCAAGGAGACACGTACGCTTCAGTGTCATCAGGTGGTGAAGATTCTCTGCGGGGCCACTTGCGAGAAGACGCGCGCGTGCGGTGTGCACAAGTGCGTGGAGATCTGCCACGTGGACGCGTGTCCGGAGTGTCAGGAGACGCGAGAGCACAAGTGTCACTGTGGGAAGCACCAGAAGACTGTGACGTGCTCCAAGGAGAACAATGAGGTGACTCAGTATGAATGCGGCGAAGTGTGTGGTCATGATCTGGAGTGTGGGAATCACAAGTGCTCGGATCTCTGTCATCCCGGAGAGTGTGGCGAGTGCAAGCTTTCTCCCACTGTCGTGAAGACTTGTCCGTGCGGCAAGAAGTCGGTGAATGAGAGGAAGTCTTGTCTGGACACTGTGCCTCTCTGTGGACAGATCTGTGCCAGGCGCTTGCAGTGCGGCACGCCTGGGAATCCGCATCTGTGCGCCGCTAAGTGCCACCAGGGTACTTGTCCGCCCTGTCCCAAGTCCACGGCAACCAAGTGTCGCTGTGGCCACATGGAGCAGATGGTAAAGTGCCGGAAGTTGACCACGAGGGCCGATGATGCGCGCTGCAAGCGTCGCTGCACGAAGAAGCGCAACTGCGGCAAGCACAAGTGCAACCAGGAGTGCTGCATTGACATCGATCACGTCTGCCCGCAGCCATGCACGTATACGCTGAGCTGCGGAAAGCACAAGTGCGACAAGACGTGTCATCCTGGGCACTGCGATCCGTGCTATCGCAGCTCCTTTCAGGAGCTCTCGTGCGAGTGCGGCACCACGACAATCTATCCGCCGGTGCCGTGCGGAACTAAGAGACCAGTCTGCAACAAGCCGTGCACGCGTCAGCATGCGTGCGCTCACGAGGTGCTGCACAACTGCCACACGGCGCAGCAGTGTCCGCCGTGCATGCTGCTGACCACCAAGTTCTGCCACGGTCGCCACGAGCAGCGCAAGACCATCCCTTGCAGCCAGGAGGGCTTCAGCTGCGGCATGCCGTGTCGCAAGGAGCTGCCATGCGGGCGCCACAAGTGCATCAAGACCTGTCACGAGGGTCCGTGTTTGCAGCAAGGTGAGATTTGCAAGCAGAATTGCCCAACGGCTCGGGTAATGTGTCCGCATGCATGCCGGGCACCGTGTCACGATGGTGAATGTCCGGAGACGCTGTGCAAGGAGTTCGTGGAGGTGTCCTGTCCGTGTGGGAATCGGAAGCAGCAGAGGACTTGCCATGACTTTGCCAGTGAATACCGTCGAATTGCCACGTCGCAGCTCGCGACGTCAATGCAGGAGATGCAGAGGGGCAACTCGATTGAGTTGAGTGACATTCTAGGTCCCATTAGGGTCACGAGTGCCAAGACGAAGGTACTGGAGTGTAATGATGAGTGTCGCACGCTGGAGCGCAATCGTCGTCTGGCCATTGGTCTGCAGATTCGCAATCCGGATCTGCCGTCGAAGCTGCAGCCCAAGTATTCGGACTTTTTGCGCGGCTGGGCGAAGAAGGATGCGTCGTTTGTGAAGAACATCCACGAGAAGCTGACTGATCTGGTGAAGTTAGCCAAGGAGAGCAAGCAGAAGTCGCGCAGTCATTCATTTCCCACGATGAACAGGGAGAAGCGCCAGGTGGTGCATGAGATGTGCGAGATGTTCGGCGTGGAATCGGTGGCGTATGACGCTGAGCCCAACAGGAACGTCGTGGCCACGGCCTCCAGGGAAACGTCTTGGCTGCCTGGGATGAGTCTCCTGGAGGTGATGGAGCGCGAGAGCGGCCAACGACGAGTTCCTCTGCCGAATGTTTGGGGAACAAAGAGAACATAG
- Protein Sequence
- MGDFNKNAPPGQPNEQMYVNFDQFIAQNNFRQFQQFPSMEFYNTNHYYSTPAQGFSGHNTQMHNTMYQPFAPFSNFIAENSSLTATASEFVPRGATASGPEEPPEPPPVEQKESRAEETTRRTNEADAMLSELNINGHQSQTGAIRKQWRTENPRREYRRNQEAAPRFQARNRPAQHHQEWQEVEYSSRRGANGRQKFASGGEKRQKWSKNRQDKENGHSESIEEADEARKRRNHQDFRPNRNLKPSVAVEGEPCSQREKLEREIDTGKLECLVCCEKIKPFHSVWTCGNCYHILHLNCIVKWAASSKSESGWRCPACQNITRAVPRDYLCFCGKQKNPQYNRSDVAHSCGDVCGRSENCPHPCTLLCHPGPCPPCQASVQRSCGCGKETRTLQCHQVVKILCGATCEKTRACGVHKCVEICHVDACPECQETREHKCHCGKHQKTVTCSKENNEVTQYECGEVCGHDLECGNHKCSDLCHPGECGECKLSPTVVKTCPCGKKSVNERKSCLDTVPLCGQICARRLQCGTPGNPHLCAAKCHQGTCPPCPKSTATKCRCGHMEQMVKCRKLTTRADDARCKRRCTKKRNCGKHKCNQECCIDIDHVCPQPCTYTLSCGKHKCDKTCHPGHCDPCYRSSFQELSCECGTTTIYPPVPCGTKRPVCNKPCTRQHACAHEVLHNCHTAQQCPPCMLLTTKFCHGRHEQRKTIPCSQEGFSCGMPCRKELPCGRHKCIKTCHEGPCLQQGEICKQNCPTARVMCPHACRAPCHDGECPETLCKEFVEVSCPCGNRKQQRTCHDFASEYRRIATSQLATSMQEMQRGNSIELSDILGPIRVTSAKTKVLECNDECRTLERNRRLAIGLQIRNPDLPSKLQPKYSDFLRGWAKKDASFVKNIHEKLTDLVKLAKESKQKSRSHSFPTMNREKRQVVHEMCEMFGVESVAYDAEPNRNVVATASRETSWLPGMSLLEVMERESGQRRVPLPNVWGTKRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01192307;
- 90% Identity
- -
- 80% Identity
- -