Basic Information

Insect: Phlebotomus argentipes
Gene Symbol: -
Assembly: GCA_947086385.1
Location: CAMTYR010000037.1:2456051-2461465[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.032 1.2 9.2 0.6 1 21 246 266 246 267 0.94

2 7 7.4e-05 0.0029 17.5 0.4 2 23 273 295 272 295 0.91

3 7 0.54 21 5.3 2.6 1 23 299 322 299 322 0.95

4 7 0.019 0.75 9.9 0.3 1 23 348 370 348 370 0.99

5 7 0.0015 0.058 13.4 1.6 1 23 376 398 376 398 0.99

6 7 0.0018 0.069 13.1 1.3 1 23 403 425 403 426 0.95

7 7 0.00014 0.0053 16.7 1.0 1 23 475 497 475 497 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.032	1.2	9.2	0.6	1	21	246	266	246	267	0.94
2	7	7.4e-05	0.0029	17.5	0.4	2	23	273	295	272	295	0.91
3	7	0.54	21	5.3	2.6	1	23	299	322	299	322	0.95
4	7	0.019	0.75	9.9	0.3	1	23	348	370	348	370	0.99
5	7	0.0015	0.058	13.4	1.6	1	23	376	398	376	398	0.99
6	7	0.0018	0.069	13.1	1.3	1	23	403	425	403	426	0.95
7	7	0.00014	0.0053	16.7	1.0	1	23	475	497	475	497	0.98

Sequence Information

Coding Sequence: ATGAAGAAGGTCATACAGCCAAATGTCAGAAAGGTTTACGGGCCGAGTATGCAGCAGCAGCAGACGGAGATTCAGATGAATGCCGTCCGGAAGATCAACAGCCTGCTGTCGACGGGCGCGGTGAGCGTGACGGGCCCCACACAGCCGCGCATCCTCAAGCAGAAGCCCCAGATCTTCGGGCTGAACAGCCAGCAGTCACAGAAGTGCTACGTGTGCGATGAGGCGTGCGGCATTGGGGCGTCGGTGCTCCTGGACACACTGACGCCGCACTCGCACTCCAAGCTGCCGAACAAGATTGGCCGTCTGATTGGGGACGCCTTCCTGGTGATTGTGCGTGCCGACGATGTGGTGTGCAAGCGCTGCGTGAGCCTCTTCGGCCGCATGGACAGCCTGGAGACGGAGCTGGAGCGCATCCGGAGCAACGTGCTCACATTCATCTGCAAGAAGTACGGCATCACAGAGGACGAGATCCGTCCGGGTGGCGTGAACAGCGGGCCGCCGCCGGCCAAGGTGCAGAAGATCGCCGGCGGCACGAAAGTGGTGACGCGAATCCTGGCCACGGCCGACCACGATGACGGCGAGGAGGTGCGCAAGCTGGCCAGGACAGAGGCGGCGGAGTACGAGAACACAGAGGTGCGCACGATGCCGGCGCTGGTGCGGGCGTCCACGAACAGCAGCGCCGTGCGGAAGGTGGTGTCGTCCGGGCAGCCGGCGCAGCGGGAGCCCATCAAGATCTACCGGTGCGCCACGTGCGATCACACGACGCCCGACCTGAAGCAGTTCCAGGCGCACTACGAGACGTGCCGCAGCACGTGGCCGTGCAAGGTGTGCCGGAAGATCTTCACCACGTCGTCGGCACTGAAGCAGCACACGGCGGAGAAGCACCCGTCGGACTACACGTGCCACTTCTGCAATCTCAACTTCCTCAACGACACCGCGTACAAGAAGCACCTGGAGGTGTCGCATCCGGACGTGAAGCTGGTGGAGAGCCCGGCGGCGGCCACGCCCGCCAACCAGACGGGCGCCGGCCGCGGCGTCATCTACACATGCAGCATCTGCCAGTGGAAGACGGGCGAGCGGCTGGCGTACGAGGATCACATGCGGAAGCACAACAAGATGAAGCCATTCAAGTGCCGTATCTGCAATATGCGCTTCGAGACGAGGGAGAGCGCAAGTAAACATGCCAAAACCCACCAGCCGGACTACTTCAAGTGCGGCGACTGTGCCGCGTCATTCCAGCAGCGTGAGCAGCTCATGAAGCACTTCGAGGTGCACCACAAGGCCGGTGGCCAGAAGGTGGTGGTCAGCAGCAACAGCACGCCCACATCGCAGAGTGTCACGACGCAGAAGCTGCTCCAGGAGACCATCGACGAGGCGCTGCGTGACTCTGGCGACGGCCTGGATCCCAAGGGCATCCACTTCTTCTCCTGCAACATCTGCTCGCTGACGTTCATCCAGGAGAACTACTACAATCAGCACATGGAGACCCACAAGCGGGACACGAAGAAGGTGAGCACGGCCGGCACACTGCCCACTGTCTCTGCGGCGGCCACCACGGCGCAGAGGCAGAGTCTCATCCGGCAGGACGTGAGGAGCACCAATGCCACCATCCTGGGCACGCAGGGCGCCACGATAAGTGACGCCGATCTGGAGAGCATCTTCGAGAAGATGCACGCGGAGAAGGGCGATGGCGACGCCGCGAGCGCCGTGCAAACCACCACGAGTGACAATCTCGTCATCACCAAGCAGTCCACGGCCAGCGGCGGGATCACGTACAACATCACCATCCCGCAGCAGCAGGACGGAAGCACCGCAGTACAAGAAGCGGGTGGCGGAAAAGTTATATTCCATGCAAATGAGGGCGAAGGCGGCCAGATCTCGGCCGGCATCGATATGCCGGTGCTGGACAACATGGACGAGAGCGAGGCGGCGCAGCAGCAGCAGGAGGGGCACCAGCAGCAGCAAGAGGCTACGGAGGGCGGCGCGGCGGAGGCGGGAGGCGACGCCGCGGCCAGCGGAGCGCCGGTGAGCATGCCGAGTCTCGATGATGACGCCGACTCGCAGAGTCAATCGGCCAACATTGACGCCGTGCCGATGGAGCTGGATGAGATGCAGAGTGGCGTGGAGGGGGAGCAGATAAAGTTCATACTGAATGAGAATGGGCAGCTGCTGCAGCTGGACAATCACATCATCACGACGGACGCGGATGGGAATCAGATAATCGTCCAGGGCGCCGACTCGGAGCATCTGCAGCAGCTGCTGCAGTCTGTGGCGGGTCTGGATGGCAGTACAATCCAGATGATTGGGGACAACAATCAGATGATACTCGTCCAGCAGGGCGACGGCGAGCCACAGCTGCTGGACGCGTCGCTGCTGAATGCCGACGGACACATTGTGATCCAGCAGGCGCAGGATGGCGAGAGCCAGAGCTCAGAGGACGTCCAGATTCCCACCACGGTGGCCTACACGACGGCCGGGGGGCAGGTGAACGCCGAGGATGGCGAGCACCAGGCGGAGGAGGAGCAGCAGCCGGTGGACGGCGAGGTGGTGGGCGAGCAGACGCAGGAGGTGGTGGGCGAGCAGCCCATGGAGACGGAAGAGGAGGAGGTGGCCAAGGAGGTGACGGAGGAGCAGGAAGTGGAGCAGCAGGTGAAGGAGGACACGGAGGAGCAGACGAAGGTGGCCGATGGCGAAACTGAGGGCACGCCAGTCACGTCTGTGCAGACAACAACATCGTCAGATGTGTTTTTCAACATTGACGACCTCATGGGACATCCAGAAGCGGAGCAGAAGATCCTAGACTTCAGTGCCCAAATTTCGAAATTTTAA
Protein Sequence: MKKVIQPNVRKVYGPSMQQQQTEIQMNAVRKINSLLSTGAVSVTGPTQPRILKQKPQIFGLNSQQSQKCYVCDEACGIGASVLLDTLTPHSHSKLPNKIGRLIGDAFLVIVRADDVVCKRCVSLFGRMDSLETELERIRSNVLTFICKKYGITEDEIRPGGVNSGPPPAKVQKIAGGTKVVTRILATADHDDGEEVRKLARTEAAEYENTEVRTMPALVRASTNSSAVRKVVSSGQPAQREPIKIYRCATCDHTTPDLKQFQAHYETCRSTWPCKVCRKIFTTSSALKQHTAEKHPSDYTCHFCNLNFLNDTAYKKHLEVSHPDVKLVESPAAATPANQTGAGRGVIYTCSICQWKTGERLAYEDHMRKHNKMKPFKCRICNMRFETRESASKHAKTHQPDYFKCGDCAASFQQREQLMKHFEVHHKAGGQKVVVSSNSTPTSQSVTTQKLLQETIDEALRDSGDGLDPKGIHFFSCNICSLTFIQENYYNQHMETHKRDTKKVSTAGTLPTVSAAATTAQRQSLIRQDVRSTNATILGTQGATISDADLESIFEKMHAEKGDGDAASAVQTTTSDNLVITKQSTASGGITYNITIPQQQDGSTAVQEAGGGKVIFHANEGEGGQISAGIDMPVLDNMDESEAAQQQQEGHQQQQEATEGGAAEAGGDAAASGAPVSMPSLDDDADSQSQSANIDAVPMELDEMQSGVEGEQIKFILNENGQLLQLDNHIITTDADGNQIIVQGADSEHLQQLLQSVAGLDGSTIQMIGDNNQMILVQQGDGEPQLLDASLLNADGHIVIQQAQDGESQSSEDVQIPTTVAYTTAGGQVNAEDGEHQAEEEQQPVDGEVVGEQTQEVVGEQPMETEEEEVAKEVTEEQEVEQQVKEDTEEQTKVADGETEGTPVTSVQTTTSSDVFFNIDDLMGHPEAEQKILDFSAQISKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -