Parg005167.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- Zbtb11
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000034.1:9711197-9713829[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.033 1.3 9.1 0.2 2 20 302 320 301 322 0.94 2 10 0.017 0.67 10.0 0.1 2 23 364 386 363 386 0.97 3 10 7.3 2.8e+02 1.8 0.1 5 21 571 587 569 588 0.90 4 10 0.00046 0.018 15.0 1.1 1 23 599 621 599 621 0.98 5 10 2.7e-06 0.0001 22.0 1.5 1 23 625 647 625 647 0.99 6 10 0.0012 0.047 13.7 0.1 1 23 653 676 653 676 0.93 7 10 0.16 6.3 7.0 0.4 2 23 682 704 681 704 0.95 8 10 1.4e-05 0.00056 19.7 0.3 1 23 710 732 710 732 0.98 9 10 9.4e-05 0.0037 17.1 4.0 1 23 738 760 738 760 0.95 10 10 9.7 3.8e+02 1.4 3.5 2 23 766 788 765 788 0.87
Sequence Information
- Coding Sequence
- ATGAGGTGCTGTGTTCCTGGATGCACGAGTGCAAACCTGCACTGGGGAGGAGTGAAAATGAGACATTACAGCTTCTTCAGGTTTCCCGTTGATGTGAAGGAGGCAAAAGAATGGCGGGAAATTCTCAAAGTGAAGGAGGTACCGGGAGTGTCTCAAAAGATTTGCGAGAAGCACTTTGAGCCGAAGTATCTCGAGGCGTTGCCCGGGAACAAGAAGAGACTGGACTGGAGGGCAGTTCCCATGCCAGCTGAACATGTGAAAAATGACATCTGTGCTGGTCAGATTGTGGACAAGCCAAAGAGAAAAGCGCCAGATGTGAAGAGTGAATTCTTCAAGGTTCTACAAGAGTATAAAAGGGCGAAAGAGAAGTACTTCAATCTCTTGGGCATTCCAAAGGAGTTTGAAGATGATTTCGACGATGCGGAGTACTTTGGCATTCACTATGATGGTCTCCCCTGGTGGGCGCGTCCCGTTGTGCAGCCATCCTCGGATGAGGATGTCCAGATGAAGAATGAAGATGAGAATGCACACAAGAAACTGTGCCAAATGTGTGGAAAATTGGAGGTGAACCACGATCTGCACATGCTTTTGTTCCATCCTCCGGAAATTAAGGCGGACATAGAAGTTGAGGAGGTTCAGATTCAAGATGGTCAGCAGATTGTATTTGAAGAATTGGAACAGgatattgatgagcctatggacactgatttccccgcaaatgactatgatgatgatgatgatgatgctgatgtgactccagttAagcaaaatgctCCGGATGAGAAAAGCGAATCAGGTCAGAAATACATGTGCAGTTGCTTCAAGATTTTGCCCAGTATCAACGCTCTTGTGGATCATATCTCGAAGGCGCGCGACTCCTATCCAGCCCAAATGCACAATCTCGAGTGCACAAACTGCCAGTCGCAATTTAAGGATTTGGGCCTCTTCAAGCGGCACATTGACGCCGATGGCACGCTGTGCTTCAAGTCAGCCAACCTGGTGGCATTCGCTGAGCCGCTCGCGGTGAAGAGGGTGAAGGCAGCGAGACTGAGGGCACTAAATCATGGCGTGAGGGCCTCGAAGCTGAAGGAGTGCGGAGGCTGCGGAATGATGTTTCCCCTCGGACAGAGTTTCATGGAGCACCAGAGAACTGTGCATGGCATTGAGTCGGCGGATGAGTTGGTCAACTATTTGATGGAACCGACAGACTTCAGCAAATTGGACGAGCAGTATTCGAAGGAAATTGAGCATGAGGAGAAGTACAGAGAGAAAGTCAAGTATTTTAGAGAAATGGACATCCCTAGGGAGTTTATGCATGACTTTGACGATCCAGAGGAGTATGGCCATCATGAGGGACTTCCATGGTGGGCGATGCCTGTGAAAATTGAGGAGCATTCGGAAACACGGAAGAAGTCGATGCTGCGAAAGATGGTGACTAGGAAGACGAGGAGCAAAGACATTGAGAGCGCAGGAGTGGATGAGAATGCAGAGGATGACGATAATGATGAGGATTCGTCATTCCGGTACGTACAGAGGGACAGAAAGGATCTCTGCCAGTACTGCGGTCATATTCGCGCTCACATCAATAAACATATCAACCTGAGGCACCTGTGCAAGGACAAGCCGTGTGATGACTGCGGCCAGCCGATCAGTTTGATGAAGGAGCACACGTGCATCGGCTATCCGCGGCGCAGGAACAAATATAATTGCACATGCGGAGAGGGCTTTAAGCTGATTGAGACTCTTCACGCCCACGTCAATGTGGAGAATGGAAGAGGCCGCGGGATCCACAGATTCAAGTGTGGCAAGTGCAATGAGAGTTACGACAACAAGACGGACTTTGACAACCATGTTCTGACTCATGCTGGTATTTACCAGTGTGACTTATGCAAGAAGACCTACCAGACCTCGTCTTCGctgaaggctcacttgaagattcacacggaggagcgcaagtatccgtgtgagatctgtgggcagaggttcaagaagaaAATATACGCCGAAAACCACCTCGAGTTGGTGCATCGTCAGGTGCCAGTGCCGTGCCCACACTGCTTTGGCATGTTCAAGCCCGGATTGTCgctcaacaatcacatacagcgacagcacttgaatcggcgcgactacgtgtgcgatatttgccagaagtcgttcaactcactcggggcgctgaagtatcaccttacgatccacacgggcgagcgaccgcatccatgtcccttctgccatcaggcgttcaAGACCAACAAGGACTTGCGACGGCACTACGCCAATCACAAGGATCTGACCATCAAGTGCCCGATGTGCAAGAACCACTTCCTCAATGAGGAGGAGCTCAAGGAGCACTGCAACCGGTATCACCGCGGAGGCACCGACTCGCGAGAGCAAGTGATTGAGCAGATTGACTACATTACTGAGGAGATTGTGGATGATATGGCTTAA
- Protein Sequence
- MRCCVPGCTSANLHWGGVKMRHYSFFRFPVDVKEAKEWREILKVKEVPGVSQKICEKHFEPKYLEALPGNKKRLDWRAVPMPAEHVKNDICAGQIVDKPKRKAPDVKSEFFKVLQEYKRAKEKYFNLLGIPKEFEDDFDDAEYFGIHYDGLPWWARPVVQPSSDEDVQMKNEDENAHKKLCQMCGKLEVNHDLHMLLFHPPEIKADIEVEEVQIQDGQQIVFEELEQDIDEPMDTDFPANDYDDDDDDADVTPVKQNAPDEKSESGQKYMCSCFKILPSINALVDHISKARDSYPAQMHNLECTNCQSQFKDLGLFKRHIDADGTLCFKSANLVAFAEPLAVKRVKAARLRALNHGVRASKLKECGGCGMMFPLGQSFMEHQRTVHGIESADELVNYLMEPTDFSKLDEQYSKEIEHEEKYREKVKYFREMDIPREFMHDFDDPEEYGHHEGLPWWAMPVKIEEHSETRKKSMLRKMVTRKTRSKDIESAGVDENAEDDDNDEDSSFRYVQRDRKDLCQYCGHIRAHINKHINLRHLCKDKPCDDCGQPISLMKEHTCIGYPRRRNKYNCTCGEGFKLIETLHAHVNVENGRGRGIHRFKCGKCNESYDNKTDFDNHVLTHAGIYQCDLCKKTYQTSSSLKAHLKIHTEERKYPCEICGQRFKKKIYAENHLELVHRQVPVPCPHCFGMFKPGLSLNNHIQRQHLNRRDYVCDICQKSFNSLGALKYHLTIHTGERPHPCPFCHQAFKTNKDLRRHYANHKDLTIKCPMCKNHFLNEEELKEHCNRYHRGGTDSREQVIEQIDYITEEIVDDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01191246;
- 90% Identity
- iTF_01191246;
- 80% Identity
- iTF_01191246;