Parg004772.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- ZFY
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000034.1:6204122-6205186[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.11 4.2 7.5 0.2 5 20 4 19 1 22 0.88 2 10 0.00013 0.0051 16.7 8.1 1 23 92 114 92 114 0.99 3 10 0.0025 0.098 12.7 3.9 1 23 120 143 120 143 0.97 4 10 4.7e-05 0.0018 18.1 0.7 2 23 152 174 152 174 0.95 5 10 6.2e-06 0.00024 20.9 0.1 1 23 181 203 181 203 0.98 6 10 4.1e-05 0.0016 18.3 6.2 1 23 210 232 210 232 0.97 7 10 2.9 1.1e+02 3.0 1.3 13 23 252 262 238 262 0.84 8 10 0.00022 0.0085 16.0 3.9 1 23 268 291 268 291 0.92 9 10 1.2e-07 4.8e-06 26.2 0.5 2 23 297 319 296 319 0.96 10 10 4e-06 0.00016 21.5 0.2 2 23 325 347 324 347 0.94
Sequence Information
- Coding Sequence
- ATGTGCATAATTTGTAAGGAGAACTTTTCATTCCTCTCAGAACTGAATGATCATCTGCCCAGTCACTTGATTGACGAGGAAGAGGAGAAATGCATGCCAATTACTGAAGAGTTCGTGGAATCCAAATTGGACTTCGAACTGGATATAAAGGAGGAGTCTGAGAAAGACGAGGATTTCGAGCAAGAGAATTTTGTGGATGAGGACAAGGATGATGAGTCGGACGTTCATGAAGAGAAATCAGTCGTTCTTGAGTATGTGAAGCCACAGAAGATCTTCAGGTGTACAATTTGCTCTCACACCTGCAAAACCAACACAAATCTCAAGTTACACATGAAGAAACACAGCGAAGATCGTCCTTATCAGTGTGCCAAATGCAGCAAGAAGTATAAATACATGTGCAGCCTGAGATCGCACCTGCTGATGGTACACGACAAGAACAAGCAGCGGACGGAAGTGTGTAAAATCTGCGGTAAAGGATTCTACATGAAGGAGCGGCTGAAGACGCATATTCGCGACAGACACACTTCTGACGTGTCACGATATCCGTGTcaagtttgcggcaggacgtattccacgaaggctggcgtggctgtgcacatgcagaagcacgacacgaagaacaaccatcatccatgcccgacgtgcggaaaggtcttcagcacgcatatcaatatgcacaagcattacaagagacacgacgccgtgaagaagtacttctgcgactggaaagcctgcactttcagttctctcgtgcgctcaacactcacggcacatcggcggattcacacgggcgagaagccctttccatgcgacttctgtgacaagaccttcagcgtgaagagttgcctgaaactccacgtcgcacacacgcacaatcctgactcggtgccctgcaagcagtgcgataagactttcccaacgcaatcctctctgcggaatcacatccagcgcgttcacgccgaacggacgattccctgtccagtgtgcaacaagaagttcggaaacaacggtgacctgaataggcacttgAAAGACAGTCACTCGATAAGGAAGCAGAATAAGTAA
- Protein Sequence
- MCIICKENFSFLSELNDHLPSHLIDEEEEKCMPITEEFVESKLDFELDIKEESEKDEDFEQENFVDEDKDDESDVHEEKSVVLEYVKPQKIFRCTICSHTCKTNTNLKLHMKKHSEDRPYQCAKCSKKYKYMCSLRSHLLMVHDKNKQRTEVCKICGKGFYMKERLKTHIRDRHTSDVSRYPCQVCGRTYSTKAGVAVHMQKHDTKNNHHPCPTCGKVFSTHINMHKHYKRHDAVKKYFCDWKACTFSSLVRSTLTAHRRIHTGEKPFPCDFCDKTFSVKSCLKLHVAHTHNPDSVPCKQCDKTFPTQSSLRNHIQRVHAERTIPCPVCNKKFGNNGDLNRHLKDSHSIRKQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -