Parg008853.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- ZNF639
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000037.1:15152462-15155203[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 8.5 3.3e+02 1.6 0.1 3 15 57 69 56 72 0.79 2 15 0.0035 0.14 12.2 0.1 1 23 193 216 193 216 0.93 3 15 0.0015 0.058 13.4 2.2 1 23 222 244 222 244 0.95 4 15 4e-05 0.0016 18.3 2.1 2 23 252 274 251 274 0.95 5 15 0.49 19 5.5 0.3 2 23 285 306 284 306 0.96 6 15 0.079 3.1 8.0 0.5 1 23 312 334 312 334 0.92 7 15 5.9 2.3e+02 2.1 0.1 1 14 367 380 367 384 0.76 8 15 6.4e-05 0.0025 17.7 0.9 2 23 453 474 452 474 0.97 9 15 0.00039 0.015 15.2 0.5 1 23 480 502 480 502 0.94 10 15 2e-06 7.8e-05 22.4 0.6 1 23 509 532 509 532 0.94 11 15 0.022 0.86 9.7 2.1 2 23 544 565 544 565 0.97 12 15 0.0022 0.086 12.8 1.1 2 23 578 599 577 599 0.97 13 15 9.4e-06 0.00037 20.3 3.6 1 23 605 627 605 627 0.99 14 15 2.5e-05 0.00096 19.0 0.8 1 23 633 655 633 655 0.98 15 15 0.011 0.42 10.7 1.0 1 19 661 679 661 682 0.94
Sequence Information
- Coding Sequence
- ATGATTAATATGACTTCTAAGGGAACCGATTTGTTGGAAAAGTGCCAAATATGTGAGAAATCACAGAAACTTTGGAAACCCAATGAAGAAGAATTGAGACATCTTCAAGACAAGCTGGAATCATTGACCAATTCTGGGAATCAACATAGCAATTGGTTGCAATCACTGTGCACGGATTGCAAGAAGAGACTCGATGATTTGTGGGAGTTCAAAATCCTCTGCAAGAATGCGTACAGGAAGTATCTGGATATCCAAGAGGCTCAGGAAATGCCGGATGACTATGATATGTCTTCTTACGATGTGAAGGATGATTACGAAGACAGCGAAAAAGATCGCAAGATCTTCCCCACTGAGAAAATGGACGAAGAGGAAGAAGAGAAGAAGTACTTCCAATCATTTGAAATGGTCATGCTTGCAGAAGAGACCACCATCGATATGGATTTACAGCGGAAGCGCAAGAAGCCGAAGAGCAGCGAAAAGGCACCGGAAAGACCCAAAAAGAAGAGGAAAAGGCCAGAGAACAAGGTGGGGAAGATACACAAGGAAAGCAGACAGAAGCTAAGTTTGCCCGGACCGTACACATGTGCTATTTGTGACAAGCAGTTCATCGCGAAGCAGAACATAAGGCAGCACGTTGTTGTTGTGCACAAGAAGACGCGAAACTTCCTATGCAACTTCTGTGGCAGGAAATGCGTGAATCGCCAGAGCTTGATTGTTCACGAGCAGACGCACAATGAGAACAGACCTCGAGTGCCTTGTGAATTCTGCAAAGAGACCTTCAGCACGAAGCACACCCTCAACAAGCACTTGAAGTTGGTGCACGCAGAGCTAAAACAGGAGGAGAGATTCTGGATCTGTCAACAGTGCAGCACAATCACAGAGGGCAGATATGAGTACTACGAGCACCTCAAGACTCACACGGATCTCGATAGGTTCCGATGCCGCTATTGCAGAAGAGAGTTCAGCAGCATTGACATCctggcgcagcacgagagcattcatTCTCTGCTGGACCTGTCGAATGAGGAGTTTAAATATCTCCGAGATAAACTGCAATCAGTCACAAATAAGGAGTATCAGAACATCAACTGGCTGAGATTCATCTGCACTTATTGCAAAGAGAGACTCGATGATCTCTGGGACTTCAAGATTCTCTGCAAGAATGCGTACAGGAAATATTTGGACAGTTTGGACGGATTTGAGGAAGTCAAGGAGGATTGTGAAGTGCCCGCTTTATTCCAAGTCACAACGCTTCCTACATTGAACATAGAAGAGAGTTCCAAGGAGAAAGAAGAGCAATTAGTTCTGATGGAGAAGGAGAAGCGTAGAAAAAACAAATGGAATCCAGTGCATGTCACGTGTTCGCTATGCGACAAAACCTATCTGaagagcaacttgaagcagcacatgaatacggttcatctgaaaatcactccttacttgtgcaatgtttgcggaaagagattcgcaACGCGCTATCGAATGGAACAACATGAGTCTGTTCATGTCAAGGATCGACCCAGATTTCCGTGCGATTTATGCAGTAAAACATTCTCTAAGCCCACAAATCTAAAGCGCCACATCACTGAGGTGCATAACGATCCACTGAAGAGGAAACCGCCAAAGCCACGATGCAAGTATTGCTGCATCGCCTTCGAGAACAAGGAGGAGTATCAGGAACACATGAGCAGCCATCCTGGAGTGAGAATTCGTAGGTCAGGATTGGATCTcaagtgcaagttctgctctaagcaattcaaagcttatgcaatgctaaagatccacgaaaggattcacacaggcgagaaaccgtataaatgcgaaatttgctcaaagaccttcaggcaggatcaacatttaaagactcacgagcgtgttcacactgggcaaaagaagtacccgtgcaaatattgcgaaaaagtgttcacacaggaaggcagtcgcaagattcatacgagaattcatacaggagaaactccttttcagtgtTCCAACTGCCCCAAGAGATTCTACGAGAGGAAAATGTGGAAAAACCACAATATTAAGTGTTCTGAGGCATCTCATAATCAACCAACGACGTGA
- Protein Sequence
- MINMTSKGTDLLEKCQICEKSQKLWKPNEEELRHLQDKLESLTNSGNQHSNWLQSLCTDCKKRLDDLWEFKILCKNAYRKYLDIQEAQEMPDDYDMSSYDVKDDYEDSEKDRKIFPTEKMDEEEEEKKYFQSFEMVMLAEETTIDMDLQRKRKKPKSSEKAPERPKKKRKRPENKVGKIHKESRQKLSLPGPYTCAICDKQFIAKQNIRQHVVVVHKKTRNFLCNFCGRKCVNRQSLIVHEQTHNENRPRVPCEFCKETFSTKHTLNKHLKLVHAELKQEERFWICQQCSTITEGRYEYYEHLKTHTDLDRFRCRYCRREFSSIDILAQHESIHSLLDLSNEEFKYLRDKLQSVTNKEYQNINWLRFICTYCKERLDDLWDFKILCKNAYRKYLDSLDGFEEVKEDCEVPALFQVTTLPTLNIEESSKEKEEQLVLMEKEKRRKNKWNPVHVTCSLCDKTYLKSNLKQHMNTVHLKITPYLCNVCGKRFATRYRMEQHESVHVKDRPRFPCDLCSKTFSKPTNLKRHITEVHNDPLKRKPPKPRCKYCCIAFENKEEYQEHMSSHPGVRIRRSGLDLKCKFCSKQFKAYAMLKIHERIHTGEKPYKCEICSKTFRQDQHLKTHERVHTGQKKYPCKYCEKVFTQEGSRKIHTRIHTGETPFQCSNCPKRFYERKMWKNHNIKCSEASHNQPTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -