Basic Information

Insect: Phlebotomus argentipes
Gene Symbol: -
Assembly: GCA_947086385.1
Location: CAMTYR010000037.1:4449011-4451381[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00064 0.025 14.5 3.4 2 23 12 34 11 34 0.96

2 16 6.3e-05 0.0025 17.7 0.5 1 23 85 107 85 107 0.96

3 16 0.0008 0.031 14.2 3.0 1 23 116 139 116 139 0.94

4 16 0.12 4.8 7.3 2.3 1 23 231 253 231 253 0.96

5 16 1.4 53 4.1 3.1 1 23 260 283 260 283 0.92

6 16 0.22 8.7 6.5 1.8 2 23 287 308 287 308 0.97

7 16 0.0024 0.095 12.7 6.1 1 23 315 338 315 338 0.97

8 16 0.0057 0.22 11.5 0.0 1 21 343 363 343 366 0.90

9 16 0.00016 0.0061 16.5 0.8 1 23 372 394 372 394 0.98

10 16 5.8e-05 0.0023 17.8 5.3 1 23 400 422 400 422 0.98

11 16 8.1e-05 0.0031 17.4 0.2 1 23 448 470 448 470 0.98

12 16 0.0015 0.059 13.4 2.7 1 23 476 498 476 498 0.97

13 16 0.00012 0.0048 16.8 1.2 1 23 504 526 504 526 0.96

14 16 4.2e-07 1.6e-05 24.6 0.5 1 23 534 556 534 556 0.97

15 16 2.5e-05 0.00096 19.0 2.7 1 23 577 599 577 599 0.99

16 16 0.079 3.1 8.0 0.0 3 23 609 629 609 629 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00064	0.025	14.5	3.4	2	23	12	34	11	34	0.96
2	16	6.3e-05	0.0025	17.7	0.5	1	23	85	107	85	107	0.96
3	16	0.0008	0.031	14.2	3.0	1	23	116	139	116	139	0.94
4	16	0.12	4.8	7.3	2.3	1	23	231	253	231	253	0.96
5	16	1.4	53	4.1	3.1	1	23	260	283	260	283	0.92
6	16	0.22	8.7	6.5	1.8	2	23	287	308	287	308	0.97
7	16	0.0024	0.095	12.7	6.1	1	23	315	338	315	338	0.97
8	16	0.0057	0.22	11.5	0.0	1	21	343	363	343	366	0.90
9	16	0.00016	0.0061	16.5	0.8	1	23	372	394	372	394	0.98
10	16	5.8e-05	0.0023	17.8	5.3	1	23	400	422	400	422	0.98
11	16	8.1e-05	0.0031	17.4	0.2	1	23	448	470	448	470	0.98
12	16	0.0015	0.059	13.4	2.7	1	23	476	498	476	498	0.97
13	16	0.00012	0.0048	16.8	1.2	1	23	504	526	504	526	0.96
14	16	4.2e-07	1.6e-05	24.6	0.5	1	23	534	556	534	556	0.97
15	16	2.5e-05	0.00096	19.0	2.7	1	23	577	599	577	599	0.99
16	16	0.079	3.1	8.0	0.0	3	23	609	629	609	629	0.98

Sequence Information

Coding Sequence: ATGAAGAAGGATAAGAGCGATAAAACGGAAAAGAGTTGCGAGCATTGTGGAAAAAAGTACAAACTTGAGAGGCGTCTCAAGAAACACATCCAGACTGTTCACAACAATGGCCAGGAGGGCCAGGAGAGTGTCCAGGCGGGAAGCAGTGATGAAGAAATCGAATTTATCAACATTCAGGACAAGTCAGACGATGGTCAGAAGCAGAAGTTTCTAACGAGTTTAGTCAGGACAACTCAAACGGGAGAGAAGGAGTATTTATGTGCAATATGTGAGAAGGCTTATCCGCGGCCAAGTCGTCTTCGGCGAcacttccggaagcacaccggcgagaggaggacaaagtggttcaattgcagtgtttgcagcaagcaattttccaccgagaagaagctacagaagcacaaTTTGAGGAGGCATGCTTCACTGGAGGATTCTTCGCAGGATAATGATGAGAATACAGTCATTAGCCAAATTGATGGTGAAAATGAGACTCATGAAGAGGATGCGAAGCTGAAATCTGTTGAAATGGAAGACAATGCAGAAACTAATGATGCTGAAGAGTCCTTAGAGCAGGACATTGTGGAAGGGAGTGAGGAAGAAGAAGCTGAAGAAGTACCAAAGCCGCAGAAGAAGCGCGGTCCGAAGCCTAAGCAGTTGAAAAGAACGACGCCGCAGAAGCGTGGTGGTCCTTTCAAATGCACCTTCTGTCGATTGTCGTATTCAGCACAGAAATTCCTGGATCGACATCTTGTGTATCACACGGAGAAGGAGAAACCGTTTCCTTGTAAATCCTGCGACATGCAGTTCGACAAGTCATGCGAACTGCGCTTCCATCGGGAGAAAGTGCACGCGCAGGAGAAGTGTAACGTGTGTGGTGAGATGGTGATGTCCCTGCacgatcgccagaggcacaagacgatgcatgcggaggacaagtacaggttcgagtgtgagatctgccacaagcgtctgtgcagactgcaatcgctgcagcatcacatcgagaggacacacatgggcgataaattcaagtgtgagatctgcctgaagggattccctcgcgtgggcttgctcatggcgcactcaattgcacgccacagcgatgataagccgttcagttgcaagatgtgtggcttcaaagtgaaccgaatggccagtctgagatcgcacatgataacgcacacgaaggagaagaacttccactgtgagacttgtgggaaggcctttggacactcgagcacattctacaagcacttgcggatgcacgagcgcgccaagatgccggcgccgaaggtgcagttggaggaagtggcacgcgtgcgggcgacgcgtgagcgactgtttcagtgtgaagtgtgcgccaaggcgttcatccggatggcggatctgaagctgcatctgcgcttccacagcaatgtgcgtccgtacaagtgcacagtgtgtcccaaatcattccACTCGTCGTCAATTATGAAGAATCACCTTGATCGACACTTTGGCATCCGGAAGCACGTGTGCCGATACTGTGGGAACACCTACACTGATCCCACGGGACTCAGACGACACCTGGTCAAGCATGGTGACAGCGCCGTGAAGACATTCGACTGTGAATTGTGTGGGAAGGTGTTTGTGCAGAAGTATCAGCTCACCCGGCATGCCAGCACACACATTCCGGGATCTCTGTCCAGGCGACGAGGTGGTGTTCAGCCACAAGTGAAGCGGCAGGAGTACAAGTGCAGCGTCTGTCGGCGGACGTACATCAATAAGACGGGGTTGAAGAAGCATCTGCAGAAGCACGGTGATCAGTGTGGGAAGCAGATTGGGTGTCCGCAGTGTGGCAAATTGTATTTGGATGCTGAGGAGTTAGGAAGACATCTCGACACTCACGTCAATCCCATTGTCGTGGAGACTTCCTGTCCATCACTCATTGTTCCGGCGTCATTGTCACAGGACATAACACAAATCATCATTCTGCCCACGGATGTGAATTTCAAGGGGGAAAAGGAGGGACAGATGCTGGAGATGAGCATGGAAGATCAGGGACTGTTGCAATGA
Protein Sequence: MKKDKSDKTEKSCEHCGKKYKLERRLKKHIQTVHNNGQEGQESVQAGSSDEEIEFINIQDKSDDGQKQKFLTSLVRTTQTGEKEYLCAICEKAYPRPSRLRRHFRKHTGERRTKWFNCSVCSKQFSTEKKLQKHNLRRHASLEDSSQDNDENTVISQIDGENETHEEDAKLKSVEMEDNAETNDAEESLEQDIVEGSEEEEAEEVPKPQKKRGPKPKQLKRTTPQKRGGPFKCTFCRLSYSAQKFLDRHLVYHTEKEKPFPCKSCDMQFDKSCELRFHREKVHAQEKCNVCGEMVMSLHDRQRHKTMHAEDKYRFECEICHKRLCRLQSLQHHIERTHMGDKFKCEICLKGFPRVGLLMAHSIARHSDDKPFSCKMCGFKVNRMASLRSHMITHTKEKNFHCETCGKAFGHSSTFYKHLRMHERAKMPAPKVQLEEVARVRATRERLFQCEVCAKAFIRMADLKLHLRFHSNVRPYKCTVCPKSFHSSSIMKNHLDRHFGIRKHVCRYCGNTYTDPTGLRRHLVKHGDSAVKTFDCELCGKVFVQKYQLTRHASTHIPGSLSRRRGGVQPQVKRQEYKCSVCRRTYINKTGLKKHLQKHGDQCGKQIGCPQCGKLYLDAEELGRHLDTHVNPIVVETSCPSLIVPASLSQDITQIIILPTDVNFKGEKEGQMLEMSMEDQGLLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -