Parg001567.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- Zfy1
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000041.1:3216542-3219235[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.64 25 5.1 3.0 3 20 42 59 40 61 0.85 2 17 5.7e-05 0.0022 17.8 0.6 1 23 70 92 70 92 0.97 3 17 0.0019 0.076 13.0 0.2 1 23 98 121 98 121 0.95 4 17 0.08 3.1 7.9 0.0 1 23 124 147 124 147 0.93 5 17 0.0019 0.075 13.0 0.1 2 19 156 173 155 176 0.94 6 17 0.0099 0.38 10.8 0.6 3 23 186 206 184 206 0.97 7 17 0.0023 0.089 12.8 1.9 3 23 214 234 212 234 0.96 8 17 2.6e-05 0.001 18.9 0.4 1 23 240 262 240 262 0.94 9 17 0.032 1.3 9.2 0.6 1 22 268 289 268 289 0.95 10 17 0.018 0.72 9.9 6.4 1 23 523 546 523 546 0.97 11 17 0.0069 0.27 11.3 1.8 1 23 572 594 572 594 0.97 12 17 7e-05 0.0027 17.6 3.9 2 23 630 652 629 652 0.96 13 17 0.00059 0.023 14.6 0.6 3 21 664 682 662 683 0.91 14 17 0.00045 0.018 15.0 2.8 1 23 691 713 691 713 0.98 15 17 1.1e-06 4.2e-05 23.3 0.5 3 23 721 741 720 741 0.98 16 17 1e-05 0.00039 20.2 1.8 1 23 747 769 747 769 0.97 17 17 0.00084 0.033 14.2 1.7 1 23 775 797 775 797 0.97
Sequence Information
- Coding Sequence
- ATGGCGGGGAGGTCCAGGAGGAAGACCCAACATGAAACGCTAGTGGATCAGGATGAATCCAGTCAGATTTGCGAGGAATACGTGGAAGACGCTCAGTCGGACGCTGAGCAAGGACTCAAGTGTTGTCACTTCTGTGGGAAGGACTTCCCCACATCCAGGAAGGCACTTTTGCATGAGCGTTTCTGCAAGAATGGCTCCATCGAGAGGTTCATTTGTGTGATCTGTGAACTCAATTTCAAATCCAAGAGCAGCTTGGAGCGTCATGTGACGCGTCACGAAGCGCCTGGAGGCTTCCTCTGTCCCATGTGCGACGAGACGTTCACCACGGACGCCGATCGCGCCCAGCATCGCAATACTGAGCACAAAGTCTATCGCTGCCAGATCTGCGAGGCCAAGTACGGCACAGAGGCTGAATATGTGGCGCACATCGTGAACCAGCACGGCGGGAAGGATCGGGAACCCGTGGTGTGTTCAGActgcggccagcagttccgcagcacaacccaactgaagatccacaatgactccaagtgcggcacggtgaagatgttcggctgcaacgagtgcaacagtcgcttcatgacggccaacacgctaaaggcgcacaagctgatccacctgggcgagaagaagcacctgtgcaactactgtggcaacagtttcctcagcaaggggcagctaaaggtgcacgagcggagtcacacgggcgagaagcctttcaagtgcaatgagtgcggcaaggcgttcgcctacagagagagtctggtcactcactcgtccctgcacaccggaattcgtccttatgtgtgcgaattgtgcggcagtcgcttctcctgcattgggaatctcatcaagcatcgccgctcgcggccagacacttgtggactgccccaattcaggagaaacagcaaagtcacgccgcacaAGAAGGCAAAGAATCGCGCACATCTGACCACGAAGCTGGAGAAACTCGTGGAGCGAAATGAGATCTCAATCGTACATCAGCTGCAGATTGTGGACCAAAGCGAGGAGATTGATGTGAAGGAGGAGAGGAATGAAGTGGAGATATTCAATGCTGCTGGAGTTCCGCAGAGAGCCACCGAGGAGTCTCTGGCTACCAAGATAGAGAACATTTCCGATGTGAAGCCTCAAGTTCAGGAAGTTCTCATTCACAATGCCAGAGAAGCTGAAGATCTGGAAGATGATGTGCCTCTATCTCATCTCAGATCACAAGTGGTTACGACGAAGGATCAGAAATTCATTCTCACTGAGGTGGAAATTGTCCCAACAGTCACGAAAGAGTTGCCCAAAAGGCGCCCAAGACAGGCGAAGAGCGTGCGGAAGATGCGCATCAAGAAGTCAGAGTCGGCAGATTCCGATGACTCCAATGACATTGACTTCCTGGACGTTGGGGACTTGCCAAATGCCTCAGAGGGCTCCGAAGCGGATGAAGATTATCAGCCTGACGAGGCGGAGATTAAGGAGGAGGAGCTGGAAGAGCCAACCGACCAAATACCGCACTCACAGCCCAAGAAGAGAGCCGACAGAGTGTCGGTTACGCATGAGTACAAGTGCGATCACTGTCCCAAGATGTTCTGCTACAAGACCATCTTCAATCTGCACCTGAAGAGGGAGCACAACATGGACATCAAGGATGAGGATCTGCCCAATCAACAGCGGTACAGCAAAATTCTCTTTCCCAGGGATCGCGTGCACGAGTGTCGCTTCTGCAAGCGGAAATATGCCAATAAACCAGCTCTTCTCAAGCATGAGCAAGTTCATGGCCCAGAAGGAAATTTACACATCAAGTGCCGCGTCTGTAAGGAATACTTTGAGACTCATGAGAAGGAGAAAGAACATCGCGTGGCCAAACACAAAGATCAGATCACTTGTAAGGAGTGCAATAAGATGTACCGCGATGAGAATCATCTGCAAGTTCACATCAGAAACTGCCATACGAAGACGGGGGTGAAGAAGCCGCAACATCTCTGTGGCAAGTGTGGGAAGAGTTTCACCTCGAAGACGGCAATGATGGATCACGAGCGATCGGATTGCGGAAAGTCCCCGATTtatcagtgcgacgtgtgcaagaagttctaccacagcgccggatcgctaaagacacacaagaatgtgcacaccaacgaactgccgaatctctgcaagtactgcggaaagggtttccggacgcaggggcagctgaaggtgcacgagaggattcacacgggagaaaagccctttcagtgcacgtactgtcccaaggcgttcagtcatcgggagagtctattgactcacgtatctctgcacacgggattcaagagattcatgtgttccggctgcgggcagcgcttcacTTGCATCTCCAATCTGCAGGCTCACCGGAAAGCCCACGCGGACACGTGTGGACTCGTGCCGAATTGTACAAAGGCAGTGGGACCGATGGAAATCCACGTGCAGTCTATGAAAAATGAGGATAATGAACAGGAATAG
- Protein Sequence
- MAGRSRRKTQHETLVDQDESSQICEEYVEDAQSDAEQGLKCCHFCGKDFPTSRKALLHERFCKNGSIERFICVICELNFKSKSSLERHVTRHEAPGGFLCPMCDETFTTDADRAQHRNTEHKVYRCQICEAKYGTEAEYVAHIVNQHGGKDREPVVCSDCGQQFRSTTQLKIHNDSKCGTVKMFGCNECNSRFMTANTLKAHKLIHLGEKKHLCNYCGNSFLSKGQLKVHERSHTGEKPFKCNECGKAFAYRESLVTHSSLHTGIRPYVCELCGSRFSCIGNLIKHRRSRPDTCGLPQFRRNSKVTPHKKAKNRAHLTTKLEKLVERNEISIVHQLQIVDQSEEIDVKEERNEVEIFNAAGVPQRATEESLATKIENISDVKPQVQEVLIHNAREAEDLEDDVPLSHLRSQVVTTKDQKFILTEVEIVPTVTKELPKRRPRQAKSVRKMRIKKSESADSDDSNDIDFLDVGDLPNASEGSEADEDYQPDEAEIKEEELEEPTDQIPHSQPKKRADRVSVTHEYKCDHCPKMFCYKTIFNLHLKREHNMDIKDEDLPNQQRYSKILFPRDRVHECRFCKRKYANKPALLKHEQVHGPEGNLHIKCRVCKEYFETHEKEKEHRVAKHKDQITCKECNKMYRDENHLQVHIRNCHTKTGVKKPQHLCGKCGKSFTSKTAMMDHERSDCGKSPIYQCDVCKKFYHSAGSLKTHKNVHTNELPNLCKYCGKGFRTQGQLKVHERIHTGEKPFQCTYCPKAFSHRESLLTHVSLHTGFKRFMCSGCGQRFTCISNLQAHRKAHADTCGLVPNCTKAVGPMEIHVQSMKNEDNEQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -