Basic Information

Insect: Phlebotomus argentipes
Gene Symbol: -
Assembly: GCA_947086385.1
Location: CAMTYR010000005.1:5336280-5338027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00013 0.0052 16.7 4.1 1 23 205 227 205 227 0.98

2 11 3.3e-07 1.3e-05 24.9 2.8 1 23 233 255 233 255 0.97

3 11 0.00022 0.0086 16.0 2.5 3 23 269 289 268 289 0.98

4 11 0.00016 0.0062 16.4 0.1 2 23 296 317 295 317 0.97

5 11 2.8e-06 0.00011 22.0 4.0 1 23 323 345 323 345 0.98

6 11 1.8e-05 0.00071 19.4 0.1 1 23 351 373 351 373 0.96

7 11 5.4e-06 0.00021 21.1 0.0 1 23 379 401 379 401 0.99

8 11 9.3e-05 0.0036 17.2 0.4 1 23 407 429 407 429 0.98

9 11 1.5e-05 0.00059 19.6 2.3 1 23 435 457 435 457 0.97

10 11 3.2e-08 1.2e-06 28.1 1.2 1 23 463 485 463 485 0.99

11 11 3.4e-07 1.3e-05 24.8 2.4 1 23 491 513 491 513 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00013	0.0052	16.7	4.1	1	23	205	227	205	227	0.98
2	11	3.3e-07	1.3e-05	24.9	2.8	1	23	233	255	233	255	0.97
3	11	0.00022	0.0086	16.0	2.5	3	23	269	289	268	289	0.98
4	11	0.00016	0.0062	16.4	0.1	2	23	296	317	295	317	0.97
5	11	2.8e-06	0.00011	22.0	4.0	1	23	323	345	323	345	0.98
6	11	1.8e-05	0.00071	19.4	0.1	1	23	351	373	351	373	0.96
7	11	5.4e-06	0.00021	21.1	0.0	1	23	379	401	379	401	0.99
8	11	9.3e-05	0.0036	17.2	0.4	1	23	407	429	407	429	0.98
9	11	1.5e-05	0.00059	19.6	2.3	1	23	435	457	435	457	0.97
10	11	3.2e-08	1.2e-06	28.1	1.2	1	23	463	485	463	485	0.99
11	11	3.4e-07	1.3e-05	24.8	2.4	1	23	491	513	491	513	0.98

Sequence Information

Coding Sequence: ATGTCTCTCTTGATCAATTCCGTGCTGGAGGGCAAGAGTGAGTTGGACTTTAGCAAAGTGTGCCGCTCTTGTATGGGTCAGAAGGTGCAGATGAAGACAATCTTCGGCTCGTGCCTGGATGACATGCTGAGGACTGTGTCGTGCGTGGACGTGAAGATGGGCGACGGCCTTCCGGACCAGATGTGCGTCCAGTGCGTCCTGCAAGTGAGCCGGGCGTTCACCTTCAAGCAACAGTGCCAGAAAGCTGACGCCACTTTCCGGCTGTACATGATGAAGCACATTCCGGAAGCGAAGAATCACAGCGCAGAAGTGGTGTTCGAGGAGGAATCCATCATTCAACAGGAGATTGAGGAGTGCCCGGAGAATTCCCTACCTTCTGTGCAGGATCACGAGGAGGAGATTGTCCAGGAAAGCGTCTACTTCGATGACGCTCTGGCCACATCGGAGGACATTGACATTGAGAACCTGCAGGAAGCCAGCATCGAGCTGGAGAAGATAGAACTCCTGCCGGAGGACTGCTGTGACGATGTCCTGGCCACGGTGAAGGATCTGAAGGTGTACCAAGCGAGTGATCTGCCCGTCAAGGAGAAAATTCCGGAGCCGGAGAgtcgcttcgagtgccgcgagtgtcacaagaagttcgccgacaacaaagttctgcggcgtcacagtaaaactcacttggtcgtgaagccgcacgagtgctcaatctgcggaaagacattcgcggagagctcgaatctgaccaagcacaagaagaaacacactggcgaactgcgtaatgtggtgggcaagccaaatctctgctcggtgtgcggaaaacggttcaagtgggcgagttcgctgtccaagcacatgaagcaccacacgaaacacaagatcctcacgtgtccttactgtccgaagtactacgtcgaggcgcgctcgctgagcatccatctgcgatcgcacacgggcgagaagcctttcgtgtgcgaggtgtgccacaagggcttcacgcagctgtgcaatctcacgaaacacctgcgcgtgcacacgggcgagaagccttatctctgcccggtgtgcggcaagggattcaagcagagcggctacgtgggcatccacctgcgcacgcacaccggcgagcggccgtacgtgtgcccggactgtggcagaggcttcgccgggtccaacacgctcgccatccaccgccgcagtcacacgggcgagcgtccttacgcctgctccatctgtccgaagcgcttcgcgcgccacgagacggccgtcatccaccagcgcatccacactggcgagaagccgcacgtctgccaactctgcggccgcggattcaacagctcaggtcatctctacgggcacatgcgatcgcacaactccaacaagccctacgagtgtgacatctgcaagaagcgcttcaagagcagcagcagtctcaaTgtgcacatccgcagtcacaccggcgagaagccatactcctgcagcgtgtgcaagaagagcttctctcagcaatccactttgtccacgcatcaactcacgcaccTCAACGCTGGAACCTTCGTGGTGTCGGAGAATCAGATTCTCCAGGCCAAGGCGGACGAAGGCCAGAGTGAAGCGGTAGGTCTTTAA
Protein Sequence: MSLLINSVLEGKSELDFSKVCRSCMGQKVQMKTIFGSCLDDMLRTVSCVDVKMGDGLPDQMCVQCVLQVSRAFTFKQQCQKADATFRLYMMKHIPEAKNHSAEVVFEEESIIQQEIEECPENSLPSVQDHEEEIVQESVYFDDALATSEDIDIENLQEASIELEKIELLPEDCCDDVLATVKDLKVYQASDLPVKEKIPEPESRFECRECHKKFADNKVLRRHSKTHLVVKPHECSICGKTFAESSNLTKHKKKHTGELRNVVGKPNLCSVCGKRFKWASSLSKHMKHHTKHKILTCPYCPKYYVEARSLSIHLRSHTGEKPFVCEVCHKGFTQLCNLTKHLRVHTGEKPYLCPVCGKGFKQSGYVGIHLRTHTGERPYVCPDCGRGFAGSNTLAIHRRSHTGERPYACSICPKRFARHETAVIHQRIHTGEKPHVCQLCGRGFNSSGHLYGHMRSHNSNKPYECDICKKRFKSSSSLNVHIRSHTGEKPYSCSVCKKSFSQQSTLSTHQLTHLNAGTFVVSENQILQAKADEGQSEAVGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -