Parg010649.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phlebotomus argentipes
Gene Symbol
-
Assembly
GCA_947086385.1
Location
CAMTYR010000025.1:5932743-5936746[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.0006 0.023 14.6 1.9 1 23 57 79 57 79 0.96
2 38 0.0045 0.18 11.9 4.7 1 23 85 107 85 107 0.98
3 38 0.00032 0.013 15.5 2.7 1 23 113 135 113 135 0.98
4 38 0.82 32 4.8 2.4 1 10 141 150 141 164 0.76
5 38 0.57 22 5.2 2.1 1 23 177 199 177 199 0.85
6 38 1e-05 0.0004 20.2 3.3 2 23 206 227 205 227 0.97
7 38 8.3e-06 0.00032 20.5 0.6 1 23 233 255 233 255 0.98
8 38 0.28 11 6.2 4.9 1 19 260 278 260 282 0.86
9 38 0.27 10 6.3 0.1 2 23 296 317 295 317 0.93
10 38 1.3e-05 0.00051 19.9 1.3 1 23 323 346 323 346 0.97
11 38 0.0035 0.14 12.2 1.8 2 23 357 378 356 378 0.95
12 38 5.4e-05 0.0021 17.9 0.5 1 23 384 406 384 406 0.98
13 38 0.48 19 5.5 0.3 1 23 413 435 413 435 0.96
14 38 0.0052 0.2 11.7 0.6 2 23 443 467 442 467 0.93
15 38 0.0028 0.11 12.5 3.3 1 23 495 517 495 517 0.96
16 38 1.7e-05 0.00065 19.5 1.5 1 23 523 545 523 545 0.98
17 38 4.5e-06 0.00018 21.3 0.2 1 23 552 574 552 574 0.98
18 38 0.0033 0.13 12.3 0.4 3 23 582 603 580 603 0.96
19 38 0.0082 0.32 11.1 3.3 1 23 615 637 615 637 0.97
20 38 0.0017 0.065 13.2 1.6 2 23 644 666 643 666 0.96
21 38 0.04 1.6 8.9 2.3 1 23 672 695 672 695 0.91
22 38 0.0087 0.34 11.0 1.5 2 23 709 730 708 730 0.97
23 38 2e-05 0.00076 19.3 0.1 1 23 736 759 736 759 0.91
24 38 0.00026 0.01 15.8 1.1 2 23 770 791 769 791 0.97
25 38 0.0015 0.059 13.4 1.9 1 23 797 819 797 819 0.98
26 38 6.1 2.4e+02 2.0 0.2 1 17 826 842 826 846 0.70
27 38 0.00017 0.0066 16.3 1.3 2 23 856 880 855 880 0.96
28 38 0.021 0.84 9.7 3.6 1 23 915 937 915 937 0.95
29 38 0.0018 0.07 13.1 0.7 2 23 944 965 943 965 0.97
30 38 2e-05 0.00077 19.3 2.7 1 23 971 993 971 993 0.97
31 38 0.00012 0.0048 16.8 2.8 1 23 999 1022 999 1022 0.96
32 38 0.0096 0.37 10.8 0.3 2 23 1034 1056 1033 1056 0.95
33 38 0.00095 0.037 14.0 4.9 1 23 1062 1084 1062 1084 0.98
34 38 0.00023 0.0089 15.9 0.6 1 23 1089 1112 1089 1112 0.95
35 38 1.2 48 4.2 0.0 3 23 1128 1148 1126 1148 0.94
36 38 0.25 9.6 6.4 2.0 1 23 1154 1177 1154 1178 0.92
37 38 0.0028 0.11 12.5 0.4 2 23 1187 1209 1186 1209 0.95
38 38 0.043 1.7 8.8 0.4 2 23 1216 1237 1215 1237 0.96

Sequence Information

Coding Sequence
ATGGAAAATGCTGACAATAAGGACATGATTCTGGATCTCAGCATCGTGAAGGAAGAGTACGTGATTCAGGAATTTGACTTGGCGGAGCAGGAAGATGATAAAAGCCAAATTCCGGTTTATCGGCAAGAGAATGGGAGTGACAAGGTCAAGAATGAGGTGGAGAAGAAGCACATTTGTGCCATTTGTGGCAAGGCGTTCCGTCATCGCCGGGATATTCGGTATCACATCACAATTCACTCCAAGGAGCGCAAGCACAAGTGCCGGCAATGCCGGAAGACTTTCACAGATGAGCGTCGGTTGCTGACACACCTGAAGATCCATGCCGATGGGCAGTTGCACGAGTGTAAGTTGTGCAGCAAGACCTTCCCCAATGTGCAGTACCTGAGGATTCACTTGAAGAGACACCTCGGCATCCGGCGTCACGAGTGTCGCCACTGTGGCAAGACGTTCCTCGAGACGCGCAGCCTGAAGTTCCACATTGTGCGCTTCCACGAGGACGCGGCCACGACGGAGTTGCCCAATAACAGATTCACGTGTCATCACTGCGGCAGGATCTCAATTGACAACATTGCGCACGAATTGCACGTGCTCACGCACTCGGATGAGCGCACGATTGAGTGTCCGCGCTGTCCGAAGATGTTCAAGCATCGGGTGCATCTGAGAGTGCATCTGAAGACTCACAGGACTGACAAGTCCTTCAGCTGTGGCATCTGCAGCAAGGCCTTTAAGACTGCCCAACAGTTGCGCGTGCATGTGAAGAGACACAAGATGCTGCTCTTCAACTGTCCGTACTGCCCGAAGTGCTACAGGGACAAGAAAGCGTGCAAGTTGCACGTGTGGAATCATCACACAGGACTGCCTCTGGACATTACAGACGGTCCCGTGTCCTGTACAGCCTGCCATCAAGTGTACGACAGTCTGGATAAGCTGATGATTCACGTTGGCGTGCACGCGGGTGAGAAATCCTTCCAATGTGCCATTTGCCAGAAGGACTTCATTGACAAACGAAAGCTGCGCACACACATGAGACTTCAGCACGAGCGTCCGGAGGCGCTGAATAAGGTGCTGAAGTGCAGTGTGTGCGGCAAAGGATGTCGCGGAAGGACGCATTTGGCTCTTCATCAGGCTCTTCACACGGATGAGTTGCCATTTGAGTGTGCCATTTGCTCGAAGAGATTCAAGCGGAAGACGCAAATTGCCGCTCATGTGATGACGCACAGCAAGGAAAGGAAAGTCTACAGTTGCCAGATTTGTGGCATCGAGCGGATGAGCTTGAGGAGTGTGAGAAATCACGAAAGCACGCACAAGAAAGGTGAGAAGTTGATGGAGTGCAAGGTTGAGGGATGTAAGAAGGCGTTCAATAAGAAGACATTTCTCAACGAGCACATTGCGAAGACACACAAGGAAGTGTGGCAGACGATGGTGTCAAAGAAACCGGCGACGAAGACTGAAGCGCGCGTGAAGAAGGTGAAGGAGAAGAGACATGTTTGTGCTATTTGTGGAAAGGCTTTCTACCATCGCAGAGATATTCGACATCATGTGACCATTCACTCGACTGAGAGGAAGTTTCCCTGCTCGAAGTGCCCGAAGAGATTCACCAGCGAGCAGCGATTGAACACACACATGAGACTACACGATGATGAGAATGGTCCGTATCCGTGTGAAGTGTGTGGAAAGGTGTTTAGAATCTCAGAGTATCTGAGAATCCATCTGAAGAGACACACTGGCGAGGATTGTGTGAATTGTCAGGTATGCGGCCTGAGATTGGCGAGTTTGAGGAATCTGCGGAATCATCTGAAGAGTTTTCATGAAGAGACAGACACGGGCTTTCCACGCAATCAATTCACCTGTGACATTTGTGGGAAGAATTGCTACAACAAGCAATCCTTCGATGGTCACATGTTCAGTCACACGAACGAGAAGTCCGTGAAGTGCTCCAAATGCCCGAAGATGTTCAAGTCTGTGAAGCACGTGAAGGTGCACGAGAAGATTGTGCATGATGAGGTGAAGCTCTACTTCTGCGTGGTGTGCAGCAAAGTGTACAAGAGCAAGCATGTGTTCAAGAATCACCTCGATGCTCAGCACAGAGGCTTTCCCATGGAGATCATTGATGGTCGTCCCATGACTTGCACAGCGTGCAAGGAAGTCTTTCACACCATCAAGACGCTCAAGGAAcacattcgcattcacgctgacgagagaccgtttgagtgtccggaatgtgggaagggttttaagcaaagacgtgtccttaaagctcacatCGTTGGTCTTCATGGGTGCACTGACAAGCCCTCGAGGATCCTCAAGTGTCCTCAGTGTGGCAAAGGATGCCGCGGAAAGACATATTTGAACCTTCATCTTGCCACTCACACCATCGACGCGCCCTTCGAATGCGCTCTCTGCGCCAAGACGTTCAAACTCAAGTCTCACGTGCAGCAGCACGTGATGAGGCACAGCAAGGAGAGGAAGACATATCCTTGCAAGACGTGTGGCATGCAACTGGTGAGTCTCAGGAGTCATCGAAGGCACGAGGCGAAGTGCGATAGAGATAAGAAAGGGGTGAAATGTCCAATGAAGAAGTGCACAAAAGCCTTTTCCCAGGAGAAATACTTGACGGCTCACATTCACACTGTTCACATGAAGGGGAAGAAGAGGAAAGTCGCTAAGATCGAGGGGGAAAAGGATGTTAAGAGTGAGGAGAAAGTGTCCAAGATGCCAAAGGACAAATCGGTGATGCGATTCTTCTGCACTGTGTGCAATAAAGGCTTCCACTACAACAAGGATCTTCAGTATCACTCGTCAATTCACGTGACTGAGAAGACTGTGCGGTGTCTGAAGTGTGAGAAAACCTTTGCAGATGAGCGAAGGATGTTGACACACATGAGAATTCACTCTGACGGTGGACCGCATGAATGCAAGCTGTGCCAGAAGGTGTTCAAGAATCCCGACTATCTCCGGTatcacttgctaaggcacatgggcgtgaagaagttctcgtgtcaggagtgcgacaagaagttcgtcacctcgcgcacgtggaagcatcacatggtgcgagagcacgagggaatgggtgtgccgaggccggagaagatcacctgtgatcagtgtggcgatgcgttcggcaacaagttgtacctcaggaagcacattgagaggcgtcacagcgacgagaggaagttcacgtgctcgcgatgcgacaagacgttcaagtgcagagaggatgtgaggaagcacatgagagtgcacagtccgtggatatacacttgtcccgtgtgcagcaggaaagtcagacacagaggatacttggtgagacacatggaagCACTTCACAGAGGCGTTCCAGCGGATATTAAGGATTCTAATGCTCCTTTGGCTTGTACAGCGTGCAAAGTGCAGTTTGCAAATCTCAAAGTCCTGATGGCACACATTGGCGTGCACGCCAATGAAAGGCCACACGAATGCTCGATGTGTGGGCAGGGATTTAAGGAGAGGCGCGTTATGTTGGTGCATGTGAAGCAAAGTCACCATGGGAAGGAAAAGATGAATCTGCTGAAGTGCTCCAAGTGTGGAGAAGCTTGTCGTGGAAGAAGTGAATTGGCAGTTCATTTTGCCACTGTTCATCTCAAGACTGAAGCTCTGGAGTGCGCCTTTTGCTCCAGGAAGTTCACATCGAAGATCGGCATTGGCAAACACATGATCAAGCACAGTCAGGAAGGGTATTTGAAGCCTAAGGAAGGAAGGAAGGATGACCAGAAAAACATTACGGGTGTTAAAATTGAGATTGAAAGTGATTAA
Protein Sequence
MENADNKDMILDLSIVKEEYVIQEFDLAEQEDDKSQIPVYRQENGSDKVKNEVEKKHICAICGKAFRHRRDIRYHITIHSKERKHKCRQCRKTFTDERRLLTHLKIHADGQLHECKLCSKTFPNVQYLRIHLKRHLGIRRHECRHCGKTFLETRSLKFHIVRFHEDAATTELPNNRFTCHHCGRISIDNIAHELHVLTHSDERTIECPRCPKMFKHRVHLRVHLKTHRTDKSFSCGICSKAFKTAQQLRVHVKRHKMLLFNCPYCPKCYRDKKACKLHVWNHHTGLPLDITDGPVSCTACHQVYDSLDKLMIHVGVHAGEKSFQCAICQKDFIDKRKLRTHMRLQHERPEALNKVLKCSVCGKGCRGRTHLALHQALHTDELPFECAICSKRFKRKTQIAAHVMTHSKERKVYSCQICGIERMSLRSVRNHESTHKKGEKLMECKVEGCKKAFNKKTFLNEHIAKTHKEVWQTMVSKKPATKTEARVKKVKEKRHVCAICGKAFYHRRDIRHHVTIHSTERKFPCSKCPKRFTSEQRLNTHMRLHDDENGPYPCEVCGKVFRISEYLRIHLKRHTGEDCVNCQVCGLRLASLRNLRNHLKSFHEETDTGFPRNQFTCDICGKNCYNKQSFDGHMFSHTNEKSVKCSKCPKMFKSVKHVKVHEKIVHDEVKLYFCVVCSKVYKSKHVFKNHLDAQHRGFPMEIIDGRPMTCTACKEVFHTIKTLKEHIRIHADERPFECPECGKGFKQRRVLKAHIVGLHGCTDKPSRILKCPQCGKGCRGKTYLNLHLATHTIDAPFECALCAKTFKLKSHVQQHVMRHSKERKTYPCKTCGMQLVSLRSHRRHEAKCDRDKKGVKCPMKKCTKAFSQEKYLTAHIHTVHMKGKKRKVAKIEGEKDVKSEEKVSKMPKDKSVMRFFCTVCNKGFHYNKDLQYHSSIHVTEKTVRCLKCEKTFADERRMLTHMRIHSDGGPHECKLCQKVFKNPDYLRYHLLRHMGVKKFSCQECDKKFVTSRTWKHHMVREHEGMGVPRPEKITCDQCGDAFGNKLYLRKHIERRHSDERKFTCSRCDKTFKCREDVRKHMRVHSPWIYTCPVCSRKVRHRGYLVRHMEALHRGVPADIKDSNAPLACTACKVQFANLKVLMAHIGVHANERPHECSMCGQGFKERRVMLVHVKQSHHGKEKMNLLKCSKCGEACRGRSELAVHFATVHLKTEALECAFCSRKFTSKIGIGKHMIKHSQEGYLKPKEGRKDDQKNITGVKIEIESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-