Parg002384.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- -
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000041.1:10322519-10324210[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00014 0.18 11.4 1.4 14 44 166 193 164 193 0.90 2 7 0.072 90 2.7 0.0 18 30 231 243 220 254 0.77 3 7 0.04 50 3.5 0.7 12 29 254 271 247 281 0.78 4 7 0.12 1.5e+02 2.0 1.8 13 29 283 299 275 310 0.74 5 7 0.21 2.7e+02 1.2 1.3 13 39 310 333 301 337 0.74 6 7 4.7e-07 0.00059 19.3 3.2 12 39 337 361 332 369 0.87 7 7 0.0094 12 5.5 0.6 18 44 371 394 368 394 0.87
Sequence Information
- Coding Sequence
- ATGCTGGGAGAACTTCTGGAAATTGCCAATAAATACTTCACGGTTTCGTTGCCTGAGGAAAACTTGCTTATCTGCGATGATTGCTCAAATTTCCTGCTGAAGCTAGAGAACTTCGAAGAGCGTTGCCTGAAGGTGGATATAATGCTAAAGGAGATTAGTGAAGATCAAAATATGCAAGAATCTAATCTTCAGGCCATGCGCATAAAGTATGGTTTTGATGTGCCAGAAGAAAAATATCAGATTCAACTGTTAGAGATCCGGAAAGAAGAGGATGACTTCTCTGACGATGTGTACTCGGATCCTCTCGATCAGGATATTATAAAAACGAGGGAAACAGTTGTTGTGAAGATGGAAACCCCCGAAGAGGAAGATTCAGAGAGCCTCAAGAAGCGTGGTCGTCCTAAGAAATTAAGAGAGTCCATTAAGAGAAAACTGCAGGAACAAGAAGACATCGAGTCTCCGAAGAAGAGGAAAAGAATGTGGAAGGGAGACGGCGAGAAGAAGCACATTTGTTCCTATTGTTCGAAAGCTTTCAGCCGGCAAAACGTGATGAAGGATCACATCTTGACGAAGCACCGCAAGCAGGACATGATTCACGCTTGCTCGCAGTGCCCGAAGAGATTCGCCACCAGCTACAGATTACGACTCCACGAGGCCACACACTTGCCGGACGCCGAGAAACTCGTGCATCCTTGTCCGTTCtgcgacaagaaattcagccagaaagtcggcgccgaagtgcacatcaacgccatgcacttgggcgagaagtccttcacctgcgaagagtgcggaaagtctttcagcacgaaaggtgctctgacagagcataaaatcacccacacggatgagcgtccttgtcagtgctcattctgTCCGAAGAAGTTCAAGAATCAGCGGCAGCTGAAGCAACACGAAAGCAGTCACAAGGAATCTGGCCACGCTTGTCCGCACTGTGGCTTAAAGCTGAAGAGCATCGTGACTCTCAGGATGCATTTGTTGGTGCATTCGGACAAAAAGAAGTACAAGTGCAACTATTGCGGCAATGAATATAAGCGTTCAAAGACATTTAAGAGTCACTTGATTCTGCACACCGGCCAGCGCCCGTACGAGTGTCCTTTCTGTGATAAAACTTTTGCGAATGGATCTAATTGCCGGAGCCACAAGAAAAAAGCGCATCCAGCCGAGCTTGCGGCTTTAGAAGCTACAGGTAAACAGAAAGTAACGATTACCCCCAAATTGAAATACTTGCAGCCTAAAGTTGCAGAGTTTGCTAAGGAAAATGAACGACAGTAG
- Protein Sequence
- MLGELLEIANKYFTVSLPEENLLICDDCSNFLLKLENFEERCLKVDIMLKEISEDQNMQESNLQAMRIKYGFDVPEEKYQIQLLEIRKEEDDFSDDVYSDPLDQDIIKTRETVVVKMETPEEEDSESLKKRGRPKKLRESIKRKLQEQEDIESPKKRKRMWKGDGEKKHICSYCSKAFSRQNVMKDHILTKHRKQDMIHACSQCPKRFATSYRLRLHEATHLPDAEKLVHPCPFCDKKFSQKVGAEVHINAMHLGEKSFTCEECGKSFSTKGALTEHKITHTDERPCQCSFCPKKFKNQRQLKQHESSHKESGHACPHCGLKLKSIVTLRMHLLVHSDKKKYKCNYCGNEYKRSKTFKSHLILHTGQRPYECPFCDKTFANGSNCRSHKKKAHPAELAALEATGKQKVTITPKLKYLQPKVAEFAKENERQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -