Basic Information

Gene Symbol
ncor1
Assembly
GCA_947086385.1
Location
CAMTYR010000025.1:1520280-1523404[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-07 0.00012 21.6 0.0 4 43 553 592 551 594 0.97

Sequence Information

Coding Sequence
ATGGAAGCGGCTGTTCGACTAGTGCAAGGTGGTGGCCCAAATGGGCAGCGGATTGACACGACGGGCGGCCAGGGTGGGCAGCAGCAGCCGAATGCACTGACACATCAGGTGCGGTCAGTGCCGCCACCGGGAACGCCGTCGGGGGTGGCGCAGGTGCGCCCCATGGACATCCAGGCGGGCTACGTGGGGAAGCTGCAGGCACCCATGCAGAAGGTCAGCCGCTCGAGTCCAATGTCGCCGCCGCGGACTGTCGCCACCACGTACTACACGGGCACGGTGGTGCGCGATCCGGGGGCGCGGTACAGCCAGCAGATCCCCTACAGGCAGGTGGGTCAATACAGAGAGACTCCCTACAAAATGCCAGCCAATGTGCACCAGATGGACTACCATCGTCTCGTGTCGAATGTGTCCTCGGCGACAAACAGCTTGATGGTGGGCGGCGGTGGGAGTGCCGGGCCGGCCATGCACGAGGCGCCACCGCCTGGAATTGTGGAGAATCGCCAGCGAATCTCACTACTGCCGTATGGAGCCGGGAGTTTTATGCCTTCGGCGCAGACGCGTCAGATCCCAGCAGCGCCTGAGCATGAGTTGGACGGGCAGCCGGGCATCAAGAGGATCTGCCTGGGTGATGGCCAAGGTATGCTGAAGATTGAGGAGCAAGATCAAGGGTCTGGCTATCAGCCGCGAATCAAGAGAATTTGTGTGGATGAGACGACAGGAATGCTGAAGGTTGAGGATCCGGAGGCGCAGTCGGCGGGATATTTGAAGAGGATTCGCTTGGGTGAGGCGCCGGGCATGCTGAAGATTGAGGTGCCAGACGCTCCACCAGCAGCGGGAGCTTATCATCCTCAAGTGGAGGCGATCTCACCCACACCCGATTCCGCCGAGGAGTTGCGCGCCACGAAGGACGACTTGCTGCAGCAGATCTCGAAGGTGGACAGTGAGATTGGGAAGGTGGAGAAGTCGATTGAGTCGCTGAAGAAGAAAGAGGCATCGCTCCAGGAGGCGTCAGCCAAGCCACCCGCCACAGAGGAGACGTCCGAGACGCTGCCGAAGCACCGCAGCTTGGCGCAGAAGATCTATGCGGAGAACAAGAGGAAGGCTTCCCTGGCGCACGCAATGCTGACTAGTCTGGGTCCGCCCATTGATCTGCCGCTGTACAATCAGCCGTCCGATGTGGAGGCGTGCCGGGATGTTATTCAGCGGAATGTGGCCTTTAAGCCGAAGCTCCTGCTGCACTGTCAGAAGATCAAGTCGGAGAAGTCGGCACGGAGCGTGGCATTTGCTGAGTGCTACTTCCAGAAGTCGCAGGAGTGGCTGAGGCGGGTGGAGAAGACCGAGGGCAGCGCCAAGCGGAAGACGAAGGAGGCGAAGAATCGTGAGTTCTTTGAGAAAGTGTTCCCGGAACTGCGAAAACAGCGCGAAGATAAGGAGAGATTCAATCGTGTGGGTTCGCGAATAAAGTCTGAGGCTGATTTGGAAGAGATTATGGATGGTCTTCAAGAGCAGGCAATGGAGGACAAGAAGATGCGCTCTTATGCTGTAATACCACCACTCATGCTCGATGCGCACCAGAAGAAGTACTTCTTCATAAATGAAAACGGCGCTATGGCTGACATGGAGGCTGATTTCAAGGATCGTCAACACTTGAATCTGTGGACGACTGGTGAGAAGGAGATGTTTAAGGAGAAATTTCTGCAACATCCCAAGAACTTTGGGGCAATTGCAGCCAGTTTAGATCGAAAAACTGCACAGGACTGTGTTAGATATTACTACTTGAGTAAGAAGACGGACAACTACAAGCAGTTGCTGAGAAAGGCACGTCAGAGGACGAGAAGTTCGAAGAATCCTCAAAAGTCGACAATAAATCAGTCTCAATGTATTATTGATGCACTAACAACTGGCGTGACGACAAGATTGCAGCGCGAACAGCAGCAGAAGATTGGCGGCCGTGATCGCTCCACGGCAACATCAACGGCCAGCAGTCAAAATAGCGCAGCGGCAAACACTTCAACCGCTAGTGGCGCAGCCACTCCAGTGTCCGCGGCCAGCAGTAGTGCGTCCGCGCCGGCCAATGTGGCTGTGGTCGGCCAGACGCCAGTGAACAGCCTGGCGGCGTCGAGTAGCGGCCAAGAGTGTGGCACCAGTGAACATGAGACGAGCCAGTCTTTTCTCACGCAGACCACGAGTCAAGTGACCACGACGACAGCCGGCCAGAATCATGTGGAACCGAGCGAGAGTGGCGGACAGAATCACCAGCAGTCGGAGGCTTTTTCCGGCACGCCAAGCGACGCGTCGGCCAACGAACAAAACACCAGTCAAAATTATGGTGCAATTGACAGTATCTCAGTGCCTCTCCATCAAATGGAGTCACATGCGACGACTAAGAAGGACTTGAGCATCACACTGGAAAGAACTGGTAAAGATGACTCAACGGAAATCATTGCAGTGGATAAAGGTATTTGTGGGATTTGA
Protein Sequence
MEAAVRLVQGGGPNGQRIDTTGGQGGQQQPNALTHQVRSVPPPGTPSGVAQVRPMDIQAGYVGKLQAPMQKVSRSSPMSPPRTVATTYYTGTVVRDPGARYSQQIPYRQVGQYRETPYKMPANVHQMDYHRLVSNVSSATNSLMVGGGGSAGPAMHEAPPPGIVENRQRISLLPYGAGSFMPSAQTRQIPAAPEHELDGQPGIKRICLGDGQGMLKIEEQDQGSGYQPRIKRICVDETTGMLKVEDPEAQSAGYLKRIRLGEAPGMLKIEVPDAPPAAGAYHPQVEAISPTPDSAEELRATKDDLLQQISKVDSEIGKVEKSIESLKKKEASLQEASAKPPATEETSETLPKHRSLAQKIYAENKRKASLAHAMLTSLGPPIDLPLYNQPSDVEACRDVIQRNVAFKPKLLLHCQKIKSEKSARSVAFAECYFQKSQEWLRRVEKTEGSAKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMLDAHQKKYFFINENGAMADMEADFKDRQHLNLWTTGEKEMFKEKFLQHPKNFGAIAASLDRKTAQDCVRYYYLSKKTDNYKQLLRKARQRTRSSKNPQKSTINQSQCIIDALTTGVTTRLQREQQQKIGGRDRSTATSTASSQNSAAANTSTASGAATPVSAASSSASAPANVAVVGQTPVNSLAASSSGQECGTSEHETSQSFLTQTTSQVTTTTAGQNHVEPSESGGQNHQQSEAFSGTPSDASANEQNTSQNYGAIDSISVPLHQMESHATTKKDLSITLERTGKDDSTEIIAVDKGICGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-