Parg007782.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- bab1
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000037.1:7312243-7314207[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-18 9.4e-15 53.6 0.0 1 43 38 81 38 83 0.95 2 2 2.2 2.3e+03 -2.1 1.9 6 15 175 184 171 197 0.81
Sequence Information
- Coding Sequence
- ATGAACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGTTGGAATACGAACCAGAACATCATCCACCACCTGCGGTTCCGCGAGCGGGGACCACTCAAGTCCTGGCGCCCCGAGACCATGGCCGAGGCCATCTTTAGCGTGCTGAAGGAGGGTCTGTCGCTGTCGCAGGCCGCGCGCAAGTACGACATCCCGTACCCCACGTTCGTGCTGTACGCCAACCGCGTGCACAACATGCTGGGCCCGTCCATCGACGGCGGCACGGACCTGCGCCCCAAGGGCCGCGGCCGCCCGCAGCGCATCCTGCTTGGCATCTGGCCGGACGATCACATCCGCGGCGTCATCAAGACCGTGGTCTTTCGCGACGCCAAAGAGCTCAAGGACGAGGGCATTCCCATGGGATACGGCCGGCACTCGGAGGGCGCGCTCAACTACTCTGGCTCGCCGTGCACCAACGGCCTAGGACCGCAGGCTCCGCCGGTCGCCGGGCCCGAGTCCATGTCGCCGGACGCCGCCGCAGCGGCCGCCGTTGCCGCCGTGGCGCACGGCATTCGTCAGCAGATCCAGATGGCCGCCGCAGCGCAGCACCACCCCGATGCCGCCAATCTCGTGGCGGCGGGTGGCTTCAACTTGCCGGCGCACCTCAACATCCACCCCAACAACGGCGGTTCGGCCAGCAGCATCCCCATGCCAAAGCTGGGCTCCCCGGCCACGCCGGGACAGTTGAGCAGCGGTAACGCGAGCGGCTCCATCCCGATGCCGCGCCACGGCTCGCCAGGCTTGGCGGCGCTGTCTGGCCTGCACGGACTGCCGGGATTGCCCAGTGTTTCCGTGTCGACCACGCGAGAGACGGCCACGAGCAGCGGCCCGGCGTCGGGCGGCGGGCTGAACATCACGCGCCTGGCATCGCCGGGATCCGCGCATGATCTGCGCATGGCCAGTCCGGACGACAACTCGCTGAACTCCTCGCTGGAGATGGCGTTGGAGCCGGCCGTGAATCTGGCCGTGGGCGTGAGCGGTATGTCCTACAAGTCGCGCGGCTACACTTCGCCGCGGCAGGACAACATCTTCCAGGAGGACATCGCGGACATCGTGGGCGCGCCACGCTCCTGCCCGTCGCGCCTCAGCGGCTTCAAGGACGGCGGCGGCATCAAGATGGAGCCGGTGACCGAATGCAGGAGCGAGTGA
- Protein Sequence
- MNSYQYQLQSMWQKCWNTNQNIIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIRGVIKTVVFRDAKELKDEGIPMGYGRHSEGALNYSGSPCTNGLGPQAPPVAGPESMSPDAAAAAAVAAVAHGIRQQIQMAAAAQHHPDAANLVAAGGFNLPAHLNIHPNNGGSASSIPMPKLGSPATPGQLSSGNASGSIPMPRHGSPGLAALSGLHGLPGLPSVSVSTTRETATSSGPASGGGLNITRLASPGSAHDLRMASPDDNSLNSSLEMALEPAVNLAVGVSGMSYKSRGYTSPRQDNIFQEDIADIVGAPRSCPSRLSGFKDGGGIKMEPVTECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -