Parg008318.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- -
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000037.1:11031158-11034419[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4e-12 3.5e-09 35.7 0.0 1 40 13 53 13 56 0.91 2 4 5.8e-12 6e-09 35.0 0.0 5 44 71 111 67 112 0.85 3 4 8.7e-14 9.1e-11 40.8 0.0 1 45 122 167 122 167 0.96 4 4 2.5e-14 2.6e-11 42.6 0.1 2 38 175 211 174 216 0.90
Sequence Information
- Coding Sequence
- ATGGAGAACAGTGAGGAGAGCGCGAAGAAAGTGTGGACAGAGCAGGACATGGATGCGGCTTTGGATGCGATGCGAAACGACCAGATGAATCTTGTGAAAGCGAGCGTCCAATTTGGCATTCCTGCCTCGACACTGTGGCAACGGGCCACGCGACTGGGCATCCCGGTGCCCAAGAACGGCGTCAAGACGAAGACGTCGAGCAAGGACGGGCTGGCGGAGGCGGTGGTGCTGCTGAAGAACGGGGAGATATCGGTGAACAAGGCGTCCAAGGTGTTTGGCATTCCGCCGTCGACGCTGTACAAGATCGCGAAGCGCGAGAAGATCCAGCTCTCGCCGCCCTTTAACACGTCCGCTACGTCCTGGACGCAGGACACGCTGGCCACGGCGATGGACGCAATCCGGAATGGGCACATGTCGGTGCACATGGCCAGCACCAAGTTCAAAATACCGTCCGGGACGCTGTACGGGCGTTGCAAGCGGGAGGGGCTGGAGCTGTCGCGCACCAGCCCGGCCCAGTGGTCGCCCAAGGACCTCAAGGAGGCGCTCGAGGCCATCCGCTCGGGCCACATGTCCATCAACCAGGCGTCCGAGCACTACAAGATCTCCTACAGTGCTCTCTACAAGCGGGTCAAGCCCAGTCTGTCGCGCGCCGAAGGTCAGGCCGGACACGAGGCCGAGCGCACAGACACGGCGCTGACGGAGACGTCGGAGTCCTCGACGGAGGTGGCGGAGGACGTGCGCAAGGGCAACAGGATCATCGAGCAGAACGGCTGCTTCATCACGGTGTTGGATCCGTGCCACGTGGAAGAGAAGCCCATGGCGATGGGCATGGAGCAGCAGGCGCACTTGGAGCCGCCGCCGCATCCCGACGTGCGCCACGACGGCGCCTTTCGCCACAACGGCAGCCCCATCGGGATGGGCTACTTGGACTTCGCGCCAGAGCCGCCGGCCCCAAGTGCCATCCCCGTCACGGGATACCTCGACTACACAGCCACGGAACCCAAATACAGCACAAGCGCTGGATATCCATATCCGGCCAATGGATATGGCAACTTGCGGCCACTGGACCCGATGGAGAGCGTACCACAGATTCACAATCACCATCAACTTCCTCAATATGTGCAGCAACACCCCGGCATGAATCCGATGGGTGGCCACATGCATCACCAGATGCCCAGCATGAGAGCTTATCCGGAGCCAGTGGACTATCTCAAAATGTCACATGACCCACTTCCACATCAGGTTCCGGCCGAACACAGTGATGTCAACACTTTTAATCACCTCTAG
- Protein Sequence
- MENSEESAKKVWTEQDMDAALDAMRNDQMNLVKASVQFGIPASTLWQRATRLGIPVPKNGVKTKTSSKDGLAEAVVLLKNGEISVNKASKVFGIPPSTLYKIAKREKIQLSPPFNTSATSWTQDTLATAMDAIRNGHMSVHMASTKFKIPSGTLYGRCKREGLELSRTSPAQWSPKDLKEALEAIRSGHMSINQASEHYKISYSALYKRVKPSLSRAEGQAGHEAERTDTALTETSESSTEVAEDVRKGNRIIEQNGCFITVLDPCHVEEKPMAMGMEQQAHLEPPPHPDVRHDGAFRHNGSPIGMGYLDFAPEPPAPSAIPVTGYLDYTATEPKYSTSAGYPYPANGYGNLRPLDPMESVPQIHNHHQLPQYVQQHPGMNPMGGHMHHQMPSMRAYPEPVDYLKMSHDPLPHQVPAEHSDVNTFNHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -