Parg008317.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- -
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000037.1:11025334-11029135[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-12 1.9e-09 36.6 0.0 1 39 374 413 374 417 0.90 2 4 1.3e-12 1.4e-09 37.0 0.1 1 39 428 466 428 469 0.94 3 4 6.3e-17 6.5e-14 50.8 0.0 1 45 483 528 483 528 0.98 4 4 4.2e-20 4.3e-17 61.0 0.1 1 44 535 579 535 580 0.96
Sequence Information
- Coding Sequence
- ATGGGTGGCTTAACTAATCAATACACGCAGCAGGAAGTGGCAAAAGCAAGTGTTTCCAACGCTCAAGAAAGTCTCCTGCGAACAGCTGAAAAATTGAAAATCCGATGCCTGTGCGAGGAGGTGACTGAGACAAGCAGTGGCGAGGGCAGGAGCTGCGACAGGAGAATCCCACCGTCGACGTCGGGTGCGAAACGTACCAAAAACAACCAAAAAGTGAGCTGCGGCGAGCAGAGGACCACGGAGTCGAGGAAACGACTGGGCAGCAGAGGTGATCCGGACGTGGAGAATGGTTCAGTAGTTGTTCTGGAGCCGCGACAGGTGTTGGCACGTGATCAGAAGACCATGACGAGCCTGGGAATGGGTATGGGCATTAATGGGGGCCTGATGGGTGTCTCCATGGGCTTCCTGGACTTTGCCCCGGAGCCACCGGCACCCTCCGCCACTCCAGTCACCGAGCATGTCGACCTCAACTGCACACCCAGTTCAGACACAAGAGACTTATCGAACTCAACGCCAAATGGGGAAGTGCGGATAAAGCTCGAGACATTGCGCTCGATGGATCCCTCCGAGACTCTCGAAATGGAGAATCATCACATTCACACCATCCACCAGTTGGATCATCCACAGACGCATCATCACCATCCGGTGGCGCACCAGCAATCACACTCGCCACCGGTGCCTCAGCAGGCACACCATCAGCCTCCGCAGCCAGTGCAGCCGCCCTCGCGGGTGAATCAGCCGCAAACGGCTCATCAGTCGCCGGTGCAGCAACCGCCCCCACAGCCGCCGACGCCCCAGCCTCAGAGGCACCACAATGCCAGTCCGCCGGATAGTCAGCCGGACATCAAGCCGCCAGTGCACCATTCGATCGTCTCGGCGTCCACGAGCATGGACGTGGAGCAGGGCGGAATGGAGCATGAGCCGATGCACGGGATCATTGTTACGCCGGAAATTGTGACGATGATGACACCGAGTCAAATGGACATGTATAACTCAGACGCGAGTGAGGACTCCAAGATGATGTCCAATGGGTCTCCGGGGAATAGCAACAGTGCCACTCAGTACACGAGTCTCACGCCACAGCACGAAAACAGGACTCCGGGCGGGCCGAAGACATGGACGCAGGAGGACATGGAGGCGGCTCTGGATGCTCTGAGGAATCACAATATGAGTCTCACGAAGGCGTCAGTGACTTTTGGCATACCTTCGACAACTCTGTGGCAGCGAGCTCATCGGTTGGGTATTGACACGCCGAAGAAAGAGGGCCCAACAAAGTCCTGGAGTGAAGATTCGCTCAACAATGCTCTGGAAGCACTGCGGACTGGCACGATTTCGGCCAATAAGGCGTCCAAAGCCTTCGGCATCCCATCGTCAACTCTCTATAAGATCGCCAGGCGGGAGGGAATCCGTCTGGCGGCACCATTCAATGCGGCGCCTACCACGTGGACGCCGGAGGATCTCGAAAGGGCCCTGGAGGCCATCAGAGCCGGTCATGCGTCCGTTCAGAAGGCCAGCACGGAGTTTGGAATACCAACAGGCACTCTGTACGGGCGCTGCAAGAGGGAGGGCATTGAGCTGTCGCGCTCAAATCCGACGCCATGGTCCGAAGACGCTATGATGGAAGCCTTAGAAGCTGTTCGGGTTGGTCAGATGTCGATCAATCAAGCTGCCATTCACTACAATTTGCCATATAGTTCGCTGTATGGGCGCTTCAAGCGAGGGAAGTACGACACGTCCAGCGACGGTAGTCAGATGGATCACAGCCCGGAGAATACTCAACACCATCAGCTGCAGTACACGACGACAGTGATGCAGCAGCCGCCGCAGCAGCATCCGGTTCACATGCACCACCATCCGCCACCGATGGTGGTGGTGGCCACGTCGCAGCCTCCGCCGCCGCCGACGCCCCATCCCCAGCCAGTGCAGGCGCCCCACCATCCGCCCGCGACGTCGAACCCCGTGCAGAACCACCCCAACAGCCACGTGTACCATCAGCAGCACCATCACATGGAGAGGAGTTGA
- Protein Sequence
- MGGLTNQYTQQEVAKASVSNAQESLLRTAEKLKIRCLCEEVTETSSGEGRSCDRRIPPSTSGAKRTKNNQKVSCGEQRTTESRKRLGSRGDPDVENGSVVVLEPRQVLARDQKTMTSLGMGMGINGGLMGVSMGFLDFAPEPPAPSATPVTEHVDLNCTPSSDTRDLSNSTPNGEVRIKLETLRSMDPSETLEMENHHIHTIHQLDHPQTHHHHPVAHQQSHSPPVPQQAHHQPPQPVQPPSRVNQPQTAHQSPVQQPPPQPPTPQPQRHHNASPPDSQPDIKPPVHHSIVSASTSMDVEQGGMEHEPMHGIIVTPEIVTMMTPSQMDMYNSDASEDSKMMSNGSPGNSNSATQYTSLTPQHENRTPGGPKTWTQEDMEAALDALRNHNMSLTKASVTFGIPSTTLWQRAHRLGIDTPKKEGPTKSWSEDSLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHASVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDTSSDGSQMDHSPENTQHHQLQYTTTVMQQPPQQHPVHMHHHPPPMVVVATSQPPPPPTPHPQPVQAPHHPPATSNPVQNHPNSHVYHQQHHHMERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -