Basic Information

Gene Symbol
ct
Assembly
GCA_947086385.1
Location
CAMTYR010000022.1:308825-324525[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9e-27 2.4e-23 81.4 0.0 3 71 348 417 346 423 0.94
2 3 3.7e-32 2.3e-28 97.5 0.0 3 77 762 837 760 839 0.96
3 3 8.9e-31 5.5e-27 93.1 0.0 3 75 981 1054 979 1058 0.95

Sequence Information

Coding Sequence
ATGCTCCTCGTGGATTTGATATCCGCCTTAGTGGAGGAAGTAGCTCGATTACGAAGTGCAATTGCCGCCCTCCAGGAGTCTCATGCCGCCCAAATCCAGAGACTGGAGGATCGACTGGAGCAGAAAAGACAGCAAATCACCCGCCTCGAGGCAAGACTCGACAAACAGTCCGACTACGAGGACGTCAAGAAGGAGAACAGTCTCCTGAGGTCTGTTGACTTATCCACATCGGACTCTAAACAATTCCAAGAATTACTCCAGGAGAGGACCAAAGCTCTTGCTGCGCACTCGGAAGCCCTCAAATCAGCCAGTGCAGATGGATCCGCATCCGGCGTAGCCACTCCATTCAGTCACAACAGCCTGCAGCCCGGTGCGAAATTCCCGTCGTCGTCCTCCTCCTCCTCCCCCTGCACGCCGGCTCACACGCCGACCTCGACGCCCATCTCCCTGCCGGCGTCCCACCCCGCGCCGCCCGCCGGCAAACTGAGCGCCAACGGCGCGCCGCCAAACCCACTCTTGCCACCACCGTTCGCCAACGTGGAGACATTCGGCTCATTCCTGGGTGAAGAAATTGTCAGTAACTGGCGCCGCGGCCTCGAGCTGCCGCCGCCGCCGCCCCATCACGCCCTGGCGGCCCTGCGGCCCGCAATGCTAGCGCCCATGAACCACCAAACGAGTCGTTCTCCCTCCACAGATGCCCACCAGCTGAGCCACGAGGACAAGCCTCGCGACCACGACGCCTCGTCCACGGCCAGCAGCACGCCCGTGCTGGCCGGCGAGGAGCCGGTGAACGGCCAGGCGCACGCCAAGAGTCCCGCCGAGGACAACAACAACACCCTCGCGCCCCTACACGGCCACCCCATGCTGCAGGGGCTGCCGTTCCAGTTCCAGGAGCGCGGCCACTTCCGCTTCGCCGAGGACCTGCAGCTGCCGCCCGGCTCCATGGTGGGCCGCCTCGGCGACTCGCTCATCCCCAAGGGCGACCCCATGGAGGCGAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGAATCTCGACACACTCCACATCTCGCGGCGCGTCCGGGAGCTGCTCTCGGTGCACAACATCGGCCAGAGGCTCTTCGCCAAGTACGTGCTGGGCCTCTCCCAGGGCACAGTGTCCGAGCTGCTGTCGAAGCCGAAGCCGTGGGACAAGCTCACGGAGAAGGGACGCGACAGCTATCGCAAGATGCACGCCTGGGGATGCGATGATAACGCCGTGCTGCTGCTCAAGTCGCTCATCCCGAAGAAAGGAAAAGACTCAGCAATGCCACCGTACGGCCGGCCGGAGGACAGCATGACGGACGAGCGGATAGCGCACATCCTCAGCGAGGCGTCCAACCTGATGAAGACGCCTGGCCAGCAGCCGCCGATGAGCCAGTCCTCGATGGGCCACCAGGAGGACACGCACAGCAACGAGGACTCCAAGTCGCCGCACAATCAGTGCACGTCGCCCTTCTCCAAGGACTCATCCCAGAACCGTCGTCTCAAGAAGTACGAGAACGACGACATCCCGCAAGAGAAGGTGGCCAGGATCTACCACGAAGAGCTGTCGAAGCTCATGAAAGTGGCTCCCAGGGATGGCTTCTCCAGGTACTACTTCTCCTCCTTGATCCCTAGACCGACGCCACGACGTCCTCTCCTGATTTTGAGCAGCTGCACAACCTCATTTAGTTTTCTCTTCCCGCACTTTTTCAGCGGTGGCATGCCGCCGATGAGCCAAATCCAGGACGAGAGTCTGCGGATGACGTTCGAGGCATACCAGCGCGAGCTGGTGAAGCTCCAGCAGAGCGGCGCCAATCTGCCCAACTTCCCCAACATCCCTAATCTGCCCAGCCTGCTGGCGCTGCAGCAGCACGCGCTGAACGGCGCCCAGGATCTCAGCCTGCCGAAGGAGAAGCAGCTGAAGATGAATGGGCAGCAGTCCAGTGAGGCGGGGCACGACAAGGATTCAGACGATGCCCGTCACTCGGGCAGTGCATTTAGTCTGGTGCGACCAAAGCAGGAGTCTGCATCGACGCCCACCACCACCGCCTCGTCGGCCCCGAGTCCGCTGGGCAACTCCATCCTGCCGCCCGCCATCACGCCCACGGAGGACTTCTCGGCCGCCGCGAGTCCTCTGCAGCGCATGGCATCGATCACGAATAGCCTGATCACGCAGCCGCCAGTCACGCCGCACCACTCGACGCCCCAGCGGCCGCTGAAGGCCGTCCTGCCGCCCATCACGCAGCAGCAATTCGACATGTTCAACAATCTCAACACGGAGGACATCGTGCGCCGCGTGAAGGAAGCGCTGTCGCAGTACTCCATCAGCCAGCGCCTCTTCGGCGAGTCCGTGCTGGGCCTGTCGCAGGGCAGCGTGAGCGATCTTCTGGCCAGACCAAAGCCCTGGCACATGCTGACCCAGAAGGGACGCGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGAGAACGCTGTGCACAAGCTCGTGGCCAGTCAGTACAAGATCGCCCCCGAGAAGCTGATGCGCACCGGAAGTTACAGCGGCTCCCCGCAGATGCCGCCCACGATGGCCGGCGGCAAGATGCCGCACATGCCGAAGCTCCTCAACGAGCAGATCACGAAGATGCAGCAGGACCAGCAGCACTTAATGCAGCAGATGCAGCAGGGCTCGCCACTGTCGCAGTCCGCGCAGCAACCGCCCACATCTGCGCCCCAGGGCATGCTCCTCACGCCACCCGGCCTCCCGCCCCACCACGCCATCCCTCTGGCCGCTGCCCAGGCCGCCGCAGCGGCCGCGGCTGCGGCCCAGGAGAAGAAGCAGATGCCGATGCCGGTGCACTCGCCGCAGCAGAACAACGCCATGCGAGGAATGCACCAGCACATGTCGCCGACGGTGTACGAGATGGCCGCACTCACGCAGGACCTGGATACGCAGGTCATCACCACGAAGATCAAGGAGGCCCTGCTGGCCAACAACATTGGGCAGAAGATCTTCGGCGAAGCTGTGCTTGGTCTGTCTCAGGGCTCCGTGTCCGAGTTGCTGTCCAAGCCCAAGCCTTGGCACATGCTCAGCATCAAAGGGCGCGAGCCCTTCATCCGGATGCAATTGTGGCTGTCGGACGCCAACAACGTCGATCGGCTTCAGGCACTGAAGAACGAGCGCCGCGAGGCGAACAAGAGACGCCGATCGACTGGTCCTGGCGCGCAGGACAACAGCTCAGACACCAGCAGCAATGACACGTCGGAGTTCTATCACTCTAACTCGCCCGGGCCGGGATCTGTGGGCTCCGTCGGGGCGCCGCCGAGCAAGAAGCAGCGCGTGCTGTTCTCTGAGGAGCAGAAGGAGGCGCTCCGACTGGCATTTGCACTGGATCCGTATCCGAACGTCGCCACCATTGAGTTCCTGGCCACTGAGCTGGGCTTGTCCACGAGGACCATCACCAATTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGGGCGCCCAGTGAGCCCCCCGTGCCGCCCAGGGAGAGCCAATCGGGCGCACCCTTCGACCCGGTGCACTTCCGCATCCTGCTGAACCAGCGCCTGATGGAGCTGCAGAAGGAGCGAATGGGACTCAGCGGCGTTCCTCTGCAGTACACGCCGTACTTTGCCACGAATCCCAATCTGGCGGCTCTCATCAGCCGAGGACTGCTGCCGGGCGCCGGAGAGGCGGATCTGAGTGCCCTGAATAGCGCTTTCAAGGAGCAAATGAGCGGACTGGATCTGTCGCTGAAGCGCGAGGGCGACGACGACTTCGACGATGTCGACGGCGAGGCGGATAGCCACGTGTCGGACGCGGACTCCATCGATGAGGTGAAGTCTGAGACGAAGGAGACGCCGGTGGCCGTGCAGGCGTCCAGCGCCCGCTCGTCCAGGAGGAAACCCGCCGCGCCGCAGTGGGTGAATCCGGACTGGCAGGACGACAAGAAGCCGCCGGCGGCGGGCGGGCCGCGCGAAGAGGAGGTGATCATCAATGGCGTGTGCGTGATGCAACAGGCGGCGGACTACAGCCGCGCGGCCGGCGAGGAGACCGTCCGCATCGAGCCGCAGGCCGTCGCGGAGCGCTTCGAGGAGGCCGAGGACGAGGAGCCGGAGGCCGAGGGCGAGGACGAGGCGCGCGCCAGTCCCGCCGTGTCCGAGAAGGCGTCTTCCGAGCATCCGGCGGTCGCGTCGCCCGACTCCACGGACGACCATGACAACGGAGCGTCGGAGGCGGCAGTGAAGTCCGAAGCGGCGTCGCCGATCAAGAAGGAGCTCGACGACGAGAGCGACCGCTGGGAGTACTAA
Protein Sequence
MLLVDLISALVEEVARLRSAIAALQESHAAQIQRLEDRLEQKRQQITRLEARLDKQSDYEDVKKENSLLRSVDLSTSDSKQFQELLQERTKALAAHSEALKSASADGSASGVATPFSHNSLQPGAKFPSSSSSSSPCTPAHTPTSTPISLPASHPAPPAGKLSANGAPPNPLLPPPFANVETFGSFLGEEIVSNWRRGLELPPPPPHHALAALRPAMLAPMNHQTSRSPSTDAHQLSHEDKPRDHDASSTASSTPVLAGEEPVNGQAHAKSPAEDNNNTLAPLHGHPMLQGLPFQFQERGHFRFAEDLQLPPGSMVGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKGKDSAMPPYGRPEDSMTDERIAHILSEASNLMKTPGQQPPMSQSSMGHQEDTHSNEDSKSPHNQCTSPFSKDSSQNRRLKKYENDDIPQEKVARIYHEELSKLMKVAPRDGFSRYYFSSLIPRPTPRRPLLILSSCTTSFSFLFPHFFSGGMPPMSQIQDESLRMTFEAYQRELVKLQQSGANLPNFPNIPNLPSLLALQQHALNGAQDLSLPKEKQLKMNGQQSSEAGHDKDSDDARHSGSAFSLVRPKQESASTPTTTASSAPSPLGNSILPPAITPTEDFSAAASPLQRMASITNSLITQPPVTPHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPPTMAGGKMPHMPKLLNEQITKMQQDQQHLMQQMQQGSPLSQSAQQPPTSAPQGMLLTPPGLPPHHAIPLAAAQAAAAAAAAAQEKKQMPMPVHSPQQNNAMRGMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVDRLQALKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPGSVGSVGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLATELGLSTRTITNWFHNHRMRLKQQVPHGAPSEPPVPPRESQSGAPFDPVHFRILLNQRLMELQKERMGLSGVPLQYTPYFATNPNLAALISRGLLPGAGEADLSALNSAFKEQMSGLDLSLKREGDDDFDDVDGEADSHVSDADSIDEVKSETKETPVAVQASSARSSRRKPAAPQWVNPDWQDDKKPPAAGGPREEEVIINGVCVMQQAADYSRAAGEETVRIEPQAVAERFEEAEDEEPEAEGEDEARASPAVSEKASSEHPAVASPDSTDDHDNGASEAAVKSEAASPIKKELDDESDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01191823;
90% Identity
iTF_01191110;
80% Identity
iTF_01191110;