Basic Information

Gene Symbol
ARID5B
Assembly
GCA_947086385.1
Location
CAMTYR010000025.1:3996220-4001529[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-15 7.6e-12 44.9 0.1 2 89 342 418 341 418 0.90

Sequence Information

Coding Sequence
ATGCTGAGTTTGAAGGCTTTTGGACCACCGAGCGCCTACCATGGACCCTACACCTTCTACAGTCAGGTGCAAATCGTCTCTTTCGTGCCATCCGGCGACGCAGCGTCGCCCGCGTCGGGCTCCAGCTCGCCCACGTTCATCCTGCCGCACGACACGCCCCAGAAGGGGCCGCACAACAACAACACGTCCGCGCGGCGGAAGAATGCGCCGCGCCGCGAGCTGAGCGAGGAGAACCGCCGAATAACGGTGCTGCGACTGGGCGACTGCATCCCCGTGCGTCCGTGGAGCGATCAGGCCATCGCGTGCCTGGCGGAGATCCGAATGGTGTGGCGCGACAAGAGCGAGCAGTGCCTGCTGATCGGCCTGCGTCTGTACTTCTTGCCCGAGAACACGCCGCTGGGGCGCCACGGACACGGCGAGGACGAGGTGGTGGCCATTTCGGATCGCGTGGTGATCAAGGCGGATGATCTGCTGTCGTGGCTGGACGCCGGCTTGGAGTGGAATTGGGGCTTCAGGATTGGCTCTGGCACCGCGGAGCGCGTGTCGGTGATCAGCTTCTCCAAGTACTGCCGCTTCAGGGCGCTGATGAAGCGCATGGAGAACATGGAGGACTGGCTGAAGAGCACAGTGGTGGACGCTCTGGGCGGCAGTGCAGTCGAGGCCACGTGCAGTCGCATCATGTTCTGCAAGGAGACCTTTGACTATCCCGAGCTGGATGCACACGAGCTGCTGTGCAATCATCTGGCGCCGAAATTCAAGGGAAGACCGCGTGGCCGAAGGAAGAAGACAGCGTCCGAGACTCACGGGAAGTATGGAGACTCCACGGACACGGAATCTGCGGCCGAGTCGGAGTCTTCGAGTTGTTCGTCGAAGATGAGTTTCGCAAAGGCCAAGCTGGAGGTGCAGCACCTGAGGTACAGCCAGAGGAGTCAAAGGGTGCGCCTGAAAACGGAGCAGAGCACGGAAGCGCCAGAGAACGAGGGTGAAATGAGTGAGGAGAAGATGAAGGCGAAGAAGGAGAGCGAGAGGAAATTCCTCACGGATCTGCATCAATTCATGGTGGAGAGGAAGACACCGATACCCAAGGTTATGTGGCTGAGCTTGAGGCGAGTGAATCTGTACGATATCTACACGAGAGTGCAGGAGTTCGGCGGCTACGAGACGGTGAGCGTGAATCGGCTGTGGAAGGCGCTGAAGCGCAACAGTCCGGGATTGACGCATAAGAAGTATGAGAAGGTGCTGTTGCCGTTTGAGTTGCACCAGCGCAGTGTTCAGGAGGCCGAGGAGGCGTGCAAGAAGGAGCGGGAGTTTGCGGAGGATGTGGCGAATGGGCAGATTGGTGGGCAGCAGAAGGCCATCAAGGTGGAGAAGATGGAGCCGGAGCTGAGTCGCGAGCAGATGACGGAGATTCAGAACAAGGTGAAGGCCAAGGAGTTGAAGCAGCACGAGAAGGAGAGGCAGAAGATGCAGGTTTCCGTGCCGGTGACTGTCATTGTGGGATCGTCGCCTGGCCACGAAGAGACCACAACGTCGTCGCAGCAGATCCAAATACAGCAGCCGCGCACGACCATCACGGTGCACCAGACGACCATTCATCCGCAGGTGTCCGGGAGTGGCAGTGCGACGAAGAGCAGCAGTCAGATCACCAATCAGATCCAGATCACCAATGAGATCAAGATACAGCAGATAACACTGCCGAAGGGCGCCAAGGGTGCTGACGCTGGCGACGCGGCGGACGCCAAAGGCGGCTCGCTGCGGCACATCCGGCTCAAGTCCAATGGGCGGAAGTTCCCAGAGAATGTGCCGACGATTGATTTGCGCGGCGACAGTGACGAGGAGCTGATGAACACGAGGATTAGTGCCATGTTCCCGCCGATTCGCAAGAGGAAGTTGGACATTTTGCGCGAAGGTGGGCTGGAGGTGACGCCAATTCGGTCGAAGGATCCGCAGCCACTGAAGCAGCCGCGCCTCGCGCCGCCGGCGGAGCAGAGTGTGTTCCGAAAAGTGGAGAACATCCCCAAGTTCCAGTCCAAGTGCATGTTCACGCAGTCCGGCAAGATCTTCGGGAATCCCAAGGAGAATGTGTCGCGCGCGACTGCGCCGAGTGGCAGCTCGACGGAGGTGCTGGACTTGACGGCGAAGAAGCCCGCCGCGGCGGGCAAGAGTCACAGCGGCGCGCCGCTGGTGCCCAACTATCCGGCGCTGACCAATCCCAATCTCATGATCTCTTTCGTGCCACCAATGATGCCGCCCGGAAACTTCCTGCCGCCACTGCCGGCCTTCGTGCCGCCGGCCGCGCATCCGGCGCTCAACTTCCCGCAGCTGCCGCCGGGGCTGTCGATAGCCAACCTGGCGGAGATGAACATGAATCCGTACCTGCTGTCGTACATGTACGGCGGCGGCGACATGCTGCGGCCGCCATTCTTCGACGGCGGCGCCAAGAATGGCAAGTGA
Protein Sequence
MLSLKAFGPPSAYHGPYTFYSQVQIVSFVPSGDAASPASGSSSPTFILPHDTPQKGPHNNNTSARRKNAPRRELSEENRRITVLRLGDCIPVRPWSDQAIACLAEIRMVWRDKSEQCLLIGLRLYFLPENTPLGRHGHGEDEVVAISDRVVIKADDLLSWLDAGLEWNWGFRIGSGTAERVSVISFSKYCRFRALMKRMENMEDWLKSTVVDALGGSAVEATCSRIMFCKETFDYPELDAHELLCNHLAPKFKGRPRGRRKKTASETHGKYGDSTDTESAAESESSSCSSKMSFAKAKLEVQHLRYSQRSQRVRLKTEQSTEAPENEGEMSEEKMKAKKESERKFLTDLHQFMVERKTPIPKVMWLSLRRVNLYDIYTRVQEFGGYETVSVNRLWKALKRNSPGLTHKKYEKVLLPFELHQRSVQEAEEACKKEREFAEDVANGQIGGQQKAIKVEKMEPELSREQMTEIQNKVKAKELKQHEKERQKMQVSVPVTVIVGSSPGHEETTTSSQQIQIQQPRTTITVHQTTIHPQVSGSGSATKSSSQITNQIQITNEIKIQQITLPKGAKGADAGDAADAKGGSLRHIRLKSNGRKFPENVPTIDLRGDSDEELMNTRISAMFPPIRKRKLDILREGGLEVTPIRSKDPQPLKQPRLAPPAEQSVFRKVENIPKFQSKCMFTQSGKIFGNPKENVSRATAPSGSSTEVLDLTAKKPAAAGKSHSGAPLVPNYPALTNPNLMISFVPPMMPPGNFLPPLPAFVPPAAHPALNFPQLPPGLSIANLAEMNMNPYLLSYMYGGGDMLRPPFFDGGAKNGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-