Basic Information

Gene Symbol
jarid2b_1
Assembly
GCA_947086385.1
Location
CAMTYR010000037.1:12680968-12687791[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-23 8.3e-20 70.5 0.0 6 89 1273 1354 1268 1354 0.93

Sequence Information

Coding Sequence
ATGGTCATCTCCAAGGACGCCAAACGCAAACGGAAGGATCAGGCGACTCCCAAATCACCCTCGGAACCACCCAAAAGAACTAAGGTCCATGCACAGAGGAAATTTGCGCAGGGCCAGGGAAATTCCTCGGCGACATTTTCCCTGGCCACTCCCTCGCCTGGAGGTGTTACCGGAAAGGACTCTTCAGCTCCAGAGACTCCGCCGGAGCCCATAATGGCCAAGAAGCCACGGGCAACGGACTTTGTGACGTACCTCTGCTATTCCCGGACGCCTATTTTGTCTGAGCAACTGGATATTATCACAAAGGCCAAGACTGCACCGGCTGCGACTCCTCAAAGTTCCCAGGGGAGTTCTAGTACGCCCGTGGCAGAGGCGGGATCTTCCAAAAGTAGCAAACGGGCAATAGAGACTCGAGAGACACCTCCTAAACCACCTCCCAAGCAAGATTTCATTCCGTTTGGGGTGAGGAAACGGGCGGAACAAGTGCCGGATAAAAAGCAGAAGACTGTGGAGGCGCTCAGGAAGAAATATCACGATCAGAGAGTGGCTAAATTGAGATCTAAAGCACTTCAGAAAACAGGACCGGTAATCTCGTCTGTCAGAACGCGATCAAACCTGACAAAAAGTCCGCAAAAGGAGCCTGAAAAGAAGCAGGAAGCCAAAGCGAGTCCTGCTAAGAGGAAAATCTCCACAAGAAGTTCAGGAAAGGCTGCTGATGACTCAAATTCATCTAGTGGCATGAAGCTGATGGATGTGAAAGTTATTGTGAAGAAGGAGATTGTGGAGAAGAAATTGGCAGAGCAAAAGCCAGCACAAGAAGTGAAGAGTTCAAGAGTGACACGTCAGATGGTGATTAGAAATCCCTCAATGGCTATCAAAGTGCCGAAGAGTGATGACGAGGAAGAGGATTTCTCTTCGGATGATGAAAAACCTTTGGCAAATGCACTGGAGAAAACGTCGAAGAAAGGGAAAGTGGCTAAGAAGGATCTAGTCAAAGCAAAAAAGCCTCCGGCGAAGAGAACTCCGAAAAAGAAGTTGGACAGCGAGGCTGAGAGTGAGAAGAAGAGCAAGAGTAAAATTTCGAAGAAGGAAGTGGAGAACCTTAGTCAAACTGCTACAACTGAGGGCAGTGACATTGACGCGAAGACTACGAGACCAACTAGGAAGACCAAGGAAGCGGCCACGATCTACATGGAGTTGATTGGTAGGAAGTTGAATCTCAAGGAGTCTGATGAAGAAGCAGACGCTTCACTGGACAGCTTCCCGGAACTTCCAAATGTCCGTAAAACAGAACAAATGGAAAATGAACTGAAGCAGAACATGGGAAAGATGAAGAGTCAGAGTCCGGAGAAGATTTCGCCAGTGGAGAAGAGAAAACGTCCTGAAGCTAAAGGGTCGAAGAATGTGGCGAAAAAGTCTGCGCCTCCGCCTAAAATAGTGAAAGAACTGGAGAAAAGTTTCTCAGATTCCGATGAAGAGCCATTGGCGGTGAAAATTGTGAAGAAAAAGCGCTCCAGTCCCAAGAAGGTTCCTCCACTGCCCAGAGAGGATGATATGGCAGTCTTTTCGCCGCAGAGAGTAGTTCTGCTCCCCGAGGATCAGCCTTCGCCGATTCCTGAGTGTGAAATTCCAAAGATTTCCCCCAAGAACGACACTACAGATGACATTCTCAATCTCTCCTTCACAACATTCAAGTCTCCGACATCAGTCAAGGCGGATTCCCTGGCGATGACACCTGAACTGGCCAAGCCAACGGCTAGGGATCTCGAGCAGAGCTTCATCAAACCATTGACGCTGTTGAAGCCGAAGCAGGAAGTGCAACTGATTCAGAAGACACTGGATCTGCCGCCGAAGAAAGCCATCACAGCCAGTCTCGCGTCGCAGGGCGGCTCCAGGACTTCACCACAAGCCATCGCGAGTCTGATGAATCCATTGCCGAGCAAGGAGGAGTCGGGCAAGATCTTCGGCATCGCGAGTGTCAGTCTAGCGCAAAGCTCCGGACCGCAGGACACCAAGTGTACACTGGGCAAATGTGGCTCTGTGCACAAACCGCCGCTGGGGCCGGCGGTGCCCACGGAGGCGCTTCTTGGGGACTCCGGCGCAAACCGCGAACGACGCAAATCCAAGGTGAATATGTCGCACGAGCAGATCCAGAAGTGGCTGATTGAGTGCAGCAAGGCACCTCATCATGAAGAGATTCACGATGATCTCTCAGATGATGACTTTATGACGCCACCGAAGCCGATTTCTTACCTGCTAACTTCGTCGCCGTTCCGGGAGTTGGCAGACGAGAGTGGGAGTTCGGGTCAGGGAGTGAGGATGAAGGCAAAGGAGGAGAGGAGCAGCTCCTCAACTACTGGAAAATCGACAGTGACTAAGGGACCAACTTTAAAAGCCACTCCAGTTATGGCACCAGTGAAAGATGAACCGGCCAAAGAGCCTCTGAATTTCGCCTCGGTGAAAATTGAGGAGAAAAAGGAGAGTGCGCCGGCGAAGGTGACTAAGAAAGTGACCACGCCACCGCTAAAGAGACCAGTGAGTCCGCCAAAGGCCACAGAGAAGACTAAAGCCAGTCCGAAGACGGCAAAAACTCCGAAAGCGGCAGACAGGAAGCCAATATACAACCGGAAGACACCGCTTTACAATACAAAAGTCCCGGAAAGTAGCAAAACCAAGCAGGTTGTCAATACTTTCGGGGCGTTTTCGCCGGAAAATGAACACTCTGTCTATTCATTTGATAAGGAGGATGATGCAATTCCCGTGGCCACTCCTTTTAGACGCCACACTCGCCGAGAATCTAATAATTCTCGCACAGATGATGCTTCGAATCTGGACAGGAGTCGAGAATCTACGAAGAAGGACACAGAAACGTCATTCCAAAAGCCGTCTCCTGTAGCTTCAGCCACTCTTAAGGAGACTCCTCAGGTTTCCCTGACTCTCAGTCCGGAAGAGAATAATAAGTCAGCTTCAATTGCCGTTCGTCTGGACGTAGATTCTCAACTGGTAAATGCGACGAATGAGATAATAACTACCGTGGATGATGGAAATGACTCAGATTCTGACGGACAGACGTTCTACATTCCACTGCAGGGAGCTGGAAATTTGGTTGGTAAAGGGGATCAGATGATTCAGGCTGTGGCAGTGAAATTGGGCACTGAAATAATTGATGGATCAAAGCAAAGAGTTATTATGCGAGCAAAGCTGGTGACAAAGGCACAGATAGGCACAAATCCGACTCCCATTCCGGAATCACTGGCCATTGCACAGCAGGATATTATGAAGAGTTTGCTAGCTAACAAAGAGATTTGTTCGAAATCTGTGCCAATTGGTACTGTTCAGCCACGCTTCAAGTCTTCAGCTGCAGAGACTCCCACAACATCTCGCGCCTCTGCTCAGCGAGATCCTCCTCCTGCGCAATCGGGGGCTTCATCTTCACGGGCGCCAAGCCATTCGAGCCTCACGCGGGTTAATTCCAACTCATCCCTCGTATCACAGAAGAGCAAAAAGTCGGGCAAGACGAAGCCTAATGAAGTGCCAATGTCTGTGAGTCCTAGCAATAATACAAGCTTCCCGAGAATTGAGGATGCTGCTCTGATGGTGGAGGCGCCTGTCTTTTCACCCACAGAAAAGGAATTCCAGGATCCCATTGAGTTTTTTGATCGCATCACACCAATAGCGGCTCGCTTTGGGATTTGTAGAATCATCCCGCCGGCGAGTTTTAAGCCGGAGTGTCGAGTGTCGGATGATATGAGATTCACTGCCTACAATCAGTATGTCCACAAGATGTTGCATCGCTGGGGACCGTCGGCGAAAGAGTTGAGCGCTATTAAGAAGTATTTGGCCACACAAAGCATCACACTAACTCATCCGCCTTGGATAGGAGGGATGGAAGTGGATCTCCCGCGACTGTATCACACTGTGCAGGAGCTGGGCGGTCTCAAGGAAGTGATTGAGAAGAAGAAGTGGGCTAGAGTGGCGGAGGAGATGTGCATCCCCAAGTCAGCGCAGGATAGAGTGACGAAGTTGGATGATATTTATTGTAAGTATCTTCTGCCCTACGACACACTGAGTCCAGCTGAGAGACAGAAGCTATTTGATGAGGTGGAGGCTGACTGGGCCAAGAGGGAAGCTAAAGCCAGGAGAAATGCCGACAGGTGTGTTTCGGCCAATCAGCGTGAATCTGAGGACGCTGAAGATGAAGATGATGAGGACAGTGATGATGAGGCGGACGGAGCGATGGAGTGTATAGAGAAGGGACGAAGTATGCCTTTGAATGCCTTCTTTAGAATCGCTAGGAACACAATGGCCCTGTGGTTTAAGAACACCGAACCCTCGCCGGCTGATGTGGAGGCAGAATTCTGGCGTCATGTGGCAGTTCGTGACAGTCACGTGTGTGTTCATTCAGGCTCTATTGATTCCTCGGGTTGGGGATACGGATTCCCCGCGCCTCTGGCCAAGACCAAGGCTTCACCATGTGCTAAGCATCCGTGGAATTTAAAAGTACTCACGAACAACAGTGGCTCGATTCTGCGCTCCTTGGGACCCGTGATGGGAGTCACAGTGCCCACACTACACGTGGGGATGCTCTTTAGCGCGTGTTGCTGGTACAGAGATCCTCATGGACTGCCCTGGATTGAGTATCTGCACACTGGAGCTCCTAAAGTTTGGTATGGCGTCCCTGATGAGCAGAGTGCCAATTTCCGTACTGCTCTGACATCGCTGGTACCCACTCATTGCCAGAACAAAACTATCTGGCTGCCCTGCGACACGGCAATGGTTCCTCCGCACATGTTGACAGACAAGGGTGTGTCCTTGTGCCGGACTGAGCAGCAGCCAGGGCAGTTCGTGGTGGTCTTTCCGCGAGCATACACTTCCAGCATCGCCACGGGCTATGTCATCTCGGAGAGTGTCTACTTTGCCACGCACAAATGGCTAGACTCGTCAGATCAGGACTTTAAGGACATCCAGGAAAGTTGCGAACCCACGATGTTCTCAAGAGAGCAACTCGTCTTCTCCATTGCATCAGATCAGAGGAGCAATTCGGACACATTGGCGCAAATTCTGCCCATCATGCAGGAGGTTTACAAGAAGGAAGTGGCGCTGCGACAAGAGCTGAAGGACGCTGGAGTAATTGCTACACAGAAATTCGCCACGAAGTCAAAGAAGAATGCCGACGACGAGAATGAATGCGATCTTTGCCGGGCAAATCTATTTGTCTCAATGGTGAAGACAGAAGTGGATGAGGAGGAGATTGTTTACTGTCTTCAGCATGCCCTCAAGTTCATTCGAGATGGCGAAGTTGTGGCCAGGCAGTGCACCTTGCATCTGCGTTACTCCATTCCGGAGATTGAGCAGCTGATCAATCGCCTGAAGGAGCGCATCGAGGGCGGCTGTGGCAGTTCAGTGGGCAGCCGTAAATCTGGAGGCGGTGGAAAGAAGTCCACAATGTCAGTGGGGAGCAATTGA
Protein Sequence
MVISKDAKRKRKDQATPKSPSEPPKRTKVHAQRKFAQGQGNSSATFSLATPSPGGVTGKDSSAPETPPEPIMAKKPRATDFVTYLCYSRTPILSEQLDIITKAKTAPAATPQSSQGSSSTPVAEAGSSKSSKRAIETRETPPKPPPKQDFIPFGVRKRAEQVPDKKQKTVEALRKKYHDQRVAKLRSKALQKTGPVISSVRTRSNLTKSPQKEPEKKQEAKASPAKRKISTRSSGKAADDSNSSSGMKLMDVKVIVKKEIVEKKLAEQKPAQEVKSSRVTRQMVIRNPSMAIKVPKSDDEEEDFSSDDEKPLANALEKTSKKGKVAKKDLVKAKKPPAKRTPKKKLDSEAESEKKSKSKISKKEVENLSQTATTEGSDIDAKTTRPTRKTKEAATIYMELIGRKLNLKESDEEADASLDSFPELPNVRKTEQMENELKQNMGKMKSQSPEKISPVEKRKRPEAKGSKNVAKKSAPPPKIVKELEKSFSDSDEEPLAVKIVKKKRSSPKKVPPLPREDDMAVFSPQRVVLLPEDQPSPIPECEIPKISPKNDTTDDILNLSFTTFKSPTSVKADSLAMTPELAKPTARDLEQSFIKPLTLLKPKQEVQLIQKTLDLPPKKAITASLASQGGSRTSPQAIASLMNPLPSKEESGKIFGIASVSLAQSSGPQDTKCTLGKCGSVHKPPLGPAVPTEALLGDSGANRERRKSKVNMSHEQIQKWLIECSKAPHHEEIHDDLSDDDFMTPPKPISYLLTSSPFRELADESGSSGQGVRMKAKEERSSSSTTGKSTVTKGPTLKATPVMAPVKDEPAKEPLNFASVKIEEKKESAPAKVTKKVTTPPLKRPVSPPKATEKTKASPKTAKTPKAADRKPIYNRKTPLYNTKVPESSKTKQVVNTFGAFSPENEHSVYSFDKEDDAIPVATPFRRHTRRESNNSRTDDASNLDRSRESTKKDTETSFQKPSPVASATLKETPQVSLTLSPEENNKSASIAVRLDVDSQLVNATNEIITTVDDGNDSDSDGQTFYIPLQGAGNLVGKGDQMIQAVAVKLGTEIIDGSKQRVIMRAKLVTKAQIGTNPTPIPESLAIAQQDIMKSLLANKEICSKSVPIGTVQPRFKSSAAETPTTSRASAQRDPPPAQSGASSSRAPSHSSLTRVNSNSSLVSQKSKKSGKTKPNEVPMSVSPSNNTSFPRIEDAALMVEAPVFSPTEKEFQDPIEFFDRITPIAARFGICRIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSITLTHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKSAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREAKARRNADRCVSANQRESEDAEDEDDEDSDDEADGAMECIEKGRSMPLNAFFRIARNTMALWFKNTEPSPADVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPAPLAKTKASPCAKHPWNLKVLTNNSGSILRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAPKVWYGVPDEQSANFRTALTSLVPTHCQNKTIWLPCDTAMVPPHMLTDKGVSLCRTEQQPGQFVVVFPRAYTSSIATGYVISESVYFATHKWLDSSDQDFKDIQESCEPTMFSREQLVFSIASDQRSNSDTLAQILPIMQEVYKKEVALRQELKDAGVIATQKFATKSKKNADDENECDLCRANLFVSMVKTEVDEEEIVYCLQHALKFIRDGEVVARQCTLHLRYSIPEIEQLINRLKERIEGGCGSSVGSRKSGGGGKKSTMSVGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-