Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947086385.1
Location
CAMTYR010000034.1:11985595-11993714[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-23 1.8e-20 72.6 0.0 2 89 104 187 103 187 0.94
2 2 9.4 1.2e+04 -3.7 0.0 53 66 891 904 886 917 0.72

Sequence Information

Coding Sequence
ATGTCAGACAAGAGTGCAGAGAAGATTCCAGTGTTGTCCACTGTGGATGTGAAGCCTGAGGAGTTGGCGAAGAAGTGTAAATTTGTGTTTGATCGTCCTCCGGAAGCGCCGGTGTTCAGACCCACGCTGGAGGAGTTCAAGGATCCGGCGGCGTACATCAGCAAGATCCGGCCGACGGCGGAAGAGTGTGGCATTTGCAAGATCATTCCGCCGAGTTCCTGGTCACCGCCATTCACGCTAGATGTGGCAAAGATGCGATTCACGCCGCGTGTGCAGAGATTGAATGAGTTGGAGGCAAAGACGAGGGTGAAGCTGAACTTCCTAGATCAAATCGACAAGTTCTTGGAATTGCAGGGCGGCATGCTGAAGATTCCGATGGTGGAGAAGCGTGCGCTGGACCTTTACTCGCTGTACAGCGAAGTGCAGTCTGAGAACGGCTTTGAAGCGGCGTGTCGCGAGAGGAAGTGGAGTAAGATAGCACGCCGCATGGGTTATGCACAGGGGAGGAGCATGGGGGCGATCCTGAAGAGCCACTACGAGAAGATTCTGTATCCCTTTGAACTGCACAGCACGGGAAAGAGTGCGGACGTGAAGCCCGCGCCAGTGGTGAAGGAAGAGGATCCGCTGACCAAGTATGTTTGTCTGAAGTGCAATCGTGGCGGTGACGATGAATTGATGCTGCTCTGTGACGAGTGCGATGATGCCTATCACACGTTTTGTCTCGTGCCGCCGCTGCGAGAAGTGCCGCAGAGTGCCTGGCGATGTCCCAAATGTGTCGTAGAAGTGGTGAACCAGCCCGTGGAGGCTTTTGGGTTCGAGCAGGCGAAGCGAGAGTACACTCTACTGGAGTTCAGCGACATGGCGGACGCCTTCAAGAAGAATTACTTCCACATGCAAGCGCATCTTGTGCCCCTGGAAACGGTGGAGACGGAGTTCTGGCGCATAGTGTCGTCGATTGATGAGGACGTGACAGTTGAATATGGTGCAGATCTGCACACAATGGATCACGGGAGTGGCTTCCCCACACGAAACTCTCTCTATATGCATCCCAGTGATCAGGAGTACGCGGAGTCCAGCTGGAATCTCAACAATCTGCCACTGCTCGAGGACTCAGTTCTTAAGCACATCACAGCGGACATCAGTGGCATGAAGGCGCCCTGGATGTACGTTGGCATGTGCTTCGCGGCATTCTGCTGGCACAATGAGGATCACTGGAACTACTCGGTGAACTACCTGCATTGGGGTGAGCCCAAGACGTGGTACGGCGTGCCTGGAAGGCAGGCGGAGAACCTGGAGGCGACAATGAAGCGCGAGGCGCCCGAATTATTCGCCAGTCAACCAGATTTGCTCCATCAACTGGTGACTATCATGAATCCCAATGAGTTGATGAACAACGGCGTATCTGTGTATCGTACGGATCAGCAGTCTGGGGAGTTTATCGTCACCTTTCCGCGCGCCTATCATGCCGGCTTCAATCAGGGCTACAACTTCGCGGAGGCGGTGAACTATGCGCCAGCGGACTGGATAAAGAGTGGCCGTGAGTGTGTGAATCACTACTCAATGTTAGGCAGATACTGTGTCTTCAGTCATGACGAGATTGTGTGCAAGATGGCTCTGGACCCGGAGCAGCTTAGCATGCCAATTGCAATGGCATGCTTCCTAGATATGGCAGAGATGGTGGAAATGGAAAAGATATGGAGGAAATCACTGCTCGAATGGGGCGTTTATAAGGCCGAGAGAGAACCCTTTGAGCTCTTGTCAGACGACGCGCGCCAGTGCGAAAGTTGCAAGACTACGTGCTTCCTGTCTGCCGTGCAGTGCAATTGCTCAGATGCCAGAGTGTGTCTTCGTCACTATTCTGCGCTGTGTAATAAGTGCTCTCCGCAGGAGCACACGCTCAAGTATCGATACACGTTGGATGAGTTGCCAGTGATGTTGTGTCGCCTAAAAGCCAGGGTGGACGCATTCAGTGAGTGGCTTCAGCGTGCAAGAAAAGCCATGATGGACACCACTAAAAAGATCAGCTTTGAGGAATTGCAGAACCTTGTTACGGAGGCGCGTGAGTTGCAATTCCGGCAATCGCCACTGTTGGATTGCATTGTGGAGACTCTCAGTGAGGCCAAGAAGTGCATATTGGTTGTGCAGCAGCTGAAACAATACCAGAAGAATAACGCGACTTATCGACTCACGCTCAATGAGTTGGACTTGTTTGCCGCTGAGATTGGGAATCTGCGCTGTACAATTGGCGACACAGCCATTGTGCGTGAGTTACGCGATTCGGGCGTGATAATGGCAGAGAAAGCGCGCCAAATGCTCTCCTGTTCACTCAGTGAAATCGACTTAGGTGAAATGCAGGCCGTCATTGATCAAGCCGCTGAAATGTGTCTCAATTTGCCGGATGTTGAGCGATTGCAAGCACGCTCTCGTGTAGTGAATCTCTGCGCTCATGTTCTGCAGACGCGTGATCTCACTGTGATTCCCGAGAAGCAATTGAAAGAGGTGAGAGACGCACTGCGAGATGCGAAACAGTGGCAAGAAGACGTGCGTGAAGTGCTAGAGAATGACATTGTTGTGAATGAGGATAAACTGGAGATACTTTCGAGGCGTTGCAACAGTTTTATGGGCTCTACTGGGGAAGCGCAGTGTCTCCGGGAAGCTTACAGTCTCTACCAGAAGTGGCGTGAGTTGTTGAGCGCCATGCAATCTAAGAAGGAGTATCCTTATCTGAAGAATGTCGAAGAGGCTGTGCAAATGGCACAGTGCATCGCGTTTTGCACGCCTGAGATGCAGGATCTCAGCGCGCAGTGTGAAGCAGCCAAGGATTGGCTAGTTCAGGTTCAGAAGGCATTCCTGTGCAAGAACTCTGCCTTCAAACTTATCGATGTGTTGCTTCCGCGCACGGACGACACAGATGAGCGCCAGTGGGATGATCAAATGACTCCTGCCGAGATGATGGAAACCTTCAAAGCTGACGAGGAGTGTGAACATGCGATTATCATGGAGTTGCGAGGGAAGAACGTGACCAAAGACAAGTTCTGCATCTGTAACGTGGAATTCAATGAGAACACAATGATCAGGTGCCAGCTGTGCCTCGATTGGTTCCATCCGGCGTGTCTGCAGGGCGCTGTAGATGATGATGTGTGCTTGTGCACTTCGTGCCGGCGCTCACGCAGACCGGGACTCACGAGCATCTTGCAACTGCTGCAGTCGCTCAAAGACATCCCCATTCGCATGCCCGAAGGTGATGCTCTGCAGTATCTGGCGAAGCGCGCTATTGATTGGCAGGAGCGCGCTAACGTAGTTCTGGGGAGTGAAGAAGTGGCATCCGTGATCGCATATCTATCCGAATCTGAAGGTGTGGAGGCGAAGCTGAATGCTGAGACGCTGGAAAATTTGGACAGTTTGCTGTTCGAGGTCAATCTGATTGAAGTGACGATGGATCAGGTCATGATCATTTGTCGCGTTCTGAAGCGGGAGAAGATTGGCCGAATGGAGCGTGGCCAGAAATCTCGATCGTCGGTGAAGAGGAGGCGCAGCAAAGTGACGAAGAACTTCAGAGATTCTTCGGATGAGGACGATGATGAGGAGGAGGAGGAGAAATGCAGTGCGCCAAAGTGTGTGAGGCCGAAGGGCAGGAAATTTGTGGACTGGGTGCAGTGCGATGGCCCATGTGAGAAGTGGTTCCACATGAAATGCGTAGGCGTGCAGAAAACACAAGTGACGAATGAGAGCGACTTCTACTGTGATAAGTGTGCTTCGCGCAACAACAATCAACGACGAGGTTCGATGAGGGATCGCACGCTGGATCAGCAATGCACCGTCACTCGGCCGGCTGTTAGCAATATCGCCGGATCGCTTGCCGTGGAATTGATGACAACCCTTCTGCAACATGAATTGAGGGAATTTGCTCCGGCCTTTGTTGTGACGTCGTCCGCCAATCGTGAGGATGCTGAAGTGATTCCTGAGGGGATTCTCGGTGTCTTGCCACACTCAATCCGTGGTGTTATATCGTCCTTTGAACAAATCTTGCCAGCCACTGAGAAGTTTCCTCAATGTATTGCTTGTTCTGAGCTAGTCGCGGCTGACGTTGTGCAGAAATATGAGGAACGCTGGAACACGGGCGTTACAAATTGCATGGAACTGTTCTTTGCGAGCACCGGACGCGAGCCTCCCTATTTGCCCTTCCTGCCGGAACTCAAAGTTGTTTACGATGCCTTGGACGATGGGAGTATCGAGGATTTGGCTGAAGCTCGCCTACAGGCAATCGAGCGCTTCGCGGACGAGAAGTACATCTTTAACTGTCCAGAGTTCCTGAAGAAAGTGCAAGTGTTCTTTACGGAATTGCTCAGCACGAAGTATACCTTGGTCGATGACGAGAAGTGGGTTAACTACATAGTTGCGATTCTGCAGAAATTCTCCAATTACGAGTCAGAGTACACAACCACCGTTGCAATGTTCTATTACCTGCTGCTTGCCAAGTGCTTCGAGACGAACAGAGTGCAGATGAAGAAGGGCACAGATCCGAATCCTGAGCGCGAAGAGTACTTCAAGAGACACCTCTTGGTCTTCCTCTCGGCGGTGCCAATCACTTATGGCGTATCACGTCCGGCGATGGACATTCTCTCCAATCTAGCGTTGAGCTTATTCCAGTCCGATGAGACATTCTACGTGCTGGAGAACTGCCAATTGCATCTGCTCATCAATCTGCTCGGCATCCAGCACAAGTCCAACAAGGATGTGCTGCACTTCCTGGAATTGATGCTGGGGCGCGCCAGTGCGGACGTGAAAAAGGCCACTGTTGAGTACCTCGGCAAACACACAAAAGTCCTCACGTTGCTGCTGTTTAAAAATGAGAGTGCGCAGATACAGATTGCTGCGATCAAGCTCACCTTGGCGTGTCAGAGAGTTCTTGCCAATAAGATCTTCTTGACTCATGATGAGACCATGCAAGTGTACAACAAGATGTGTCACTCAAACAACAACATGCGCGAGCTGGCGAAGAAGTTTTTCATATTGACCCACAATAAAACAGATGCGCTGGTAAAAGGACAGACGAAAACAATTCTGGAGGCGCTCATTATTCTGATCACCAAAAAAAGGGATTGCATGGATTCTCTTAGCACGATCATCAGCTTGATGTGGAAGAACTTCCCGAAGCAAGAGCAGTTCATCCATGAAGTGTGCAACATAAAAGGCACCGACAAAAGAATCGCTTTCAAAATACATTTCCTCCACATAAAAAAAGTAATGGAGCCTGATGTTGAGATCAAGTACAAGAGGGACGCAATCGAGTCATATCTGAGCAAAATCAACATGATTATCAAGGTGTGCGATACAGATCAGGGAATCTTCGAAATCATCGTCCATACACTCTTGAACATGGACCTGAAGACGCACTATACGCCGGCATTTGAAGTGCAATTGAAAACGATGGTGGATTTCTTGATGAGGAAGTTGCTGCTGTGCGAATTCATGCCGACGCTGTATTTGGTGAACTTGGTGCTGCGCAAGATCGCAGAATTCAATGATTACACAAAGGACAGGATAAAGAAGATGATCTTAGACATGTCACAGAACTTCATACGTGAGGTGACGGGTGTGGCGGAGGATACGGCTCTGCAGCTGAGCGCCGCGTTGTATATCCACAATGTGTTGGACAACATGACGAAAATGAGAATGTTTTCCCTCTTGGGTGCCACTAAGCATTTCCTGGATTATAATAAAGCTCACACTTTGCCGAGTGTGCATCACGTCTTCACGATTCATGCGGAATTGCTGAGTGCCAAGTGGACATTCAGGAGTGTGGATGATGAAGATCTTATAAGAGAAATGGAGCACTTCCTTGACACCCACATCACGCCCTATATGCTCACCATTGAGGGCGATCCGCTGATCAATTTGGAGGTGATGCAGTCATTCTCCGTGGTCATCACGAACTTCGTGAGCCATGCACCAACGCGGGGCTACGCCCAATGGAATCTGATGCAGGACACGTTGCTGGGCTATGTCCAAGAAGTCGCGTTCTCTATGCAACCAGAGGAGACCACATCCTCTGATGGGCATGTTTCTGCTCCCATTCCGCGCACAATCTTAGAAACCCTGTTAAACCTTATTGAATGTGTCCAAAATGCTGATCATCAGATTAACAAGAGATTCGCAAAGATAATCTTCCTGCTGGCGAAGTCGCTCATCTATCCGGATTTGGTGCACAAATCCCTGGAGATTCTCTTCAAGCTTCCAAAGCAATTCATCACAATGGTCGGTGCGGTTTGCCACAGCTTCACCTTCTATCCGGAGGAGAAGACCTTTAAGCAGTTCCTGCATTCGGTTGAAGATGTGCTGGCGGCTAGAGAGCCAGATCAGCGCGTGATCAAGGGCTGTCGCATCGAGATTGTTGAGCAGTACATTCAGAATGTGGGACGATACATTACGTACAAGTATGAACTTGAAGAAAAGCAGAAGGCGGCCGAAGCAAAACAGAAGAAAGTCGATGCAAAGAAGAAGGAAGCCGAAGCAAAGCAGAAGGAGAACGAGAATCGTTTGGGCGTCATGAAAGCCATTAAGGATCTCGTGAAGTCATACACTGCGGAAGAGCTGAATAAACTCGTCGAGACACAGCAAGAATACATTTGCCAGGATTACCTCAATGCCAAGGAGAAGGAGATTCTGAAGTCATTTGTGAAGTTCCTAAAGGCTGATCACTCTGACGCTCGTACTGCCTCTCCTGGTCCGTCTACCTCAGTCGCTGGCTCTTCTTTATCGCCGCACCCCTCGAAGGCTGCTGAGCCCAAACCTGGGCCTTCCAAGCCGCCGAGATCACCTGGTCCATCTACCTCAAAAACAGGACGCTTAGATTTCAAATGA
Protein Sequence
MSDKSAEKIPVLSTVDVKPEELAKKCKFVFDRPPEAPVFRPTLEEFKDPAAYISKIRPTAEECGICKIIPPSSWSPPFTLDVAKMRFTPRVQRLNELEAKTRVKLNFLDQIDKFLELQGGMLKIPMVEKRALDLYSLYSEVQSENGFEAACRERKWSKIARRMGYAQGRSMGAILKSHYEKILYPFELHSTGKSADVKPAPVVKEEDPLTKYVCLKCNRGGDDELMLLCDECDDAYHTFCLVPPLREVPQSAWRCPKCVVEVVNQPVEAFGFEQAKREYTLLEFSDMADAFKKNYFHMQAHLVPLETVETEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTRNSLYMHPSDQEYAESSWNLNNLPLLEDSVLKHITADISGMKAPWMYVGMCFAAFCWHNEDHWNYSVNYLHWGEPKTWYGVPGRQAENLEATMKREAPELFASQPDLLHQLVTIMNPNELMNNGVSVYRTDQQSGEFIVTFPRAYHAGFNQGYNFAEAVNYAPADWIKSGRECVNHYSMLGRYCVFSHDEIVCKMALDPEQLSMPIAMACFLDMAEMVEMEKIWRKSLLEWGVYKAEREPFELLSDDARQCESCKTTCFLSAVQCNCSDARVCLRHYSALCNKCSPQEHTLKYRYTLDELPVMLCRLKARVDAFSEWLQRARKAMMDTTKKISFEELQNLVTEARELQFRQSPLLDCIVETLSEAKKCILVVQQLKQYQKNNATYRLTLNELDLFAAEIGNLRCTIGDTAIVRELRDSGVIMAEKARQMLSCSLSEIDLGEMQAVIDQAAEMCLNLPDVERLQARSRVVNLCAHVLQTRDLTVIPEKQLKEVRDALRDAKQWQEDVREVLENDIVVNEDKLEILSRRCNSFMGSTGEAQCLREAYSLYQKWRELLSAMQSKKEYPYLKNVEEAVQMAQCIAFCTPEMQDLSAQCEAAKDWLVQVQKAFLCKNSAFKLIDVLLPRTDDTDERQWDDQMTPAEMMETFKADEECEHAIIMELRGKNVTKDKFCICNVEFNENTMIRCQLCLDWFHPACLQGAVDDDVCLCTSCRRSRRPGLTSILQLLQSLKDIPIRMPEGDALQYLAKRAIDWQERANVVLGSEEVASVIAYLSESEGVEAKLNAETLENLDSLLFEVNLIEVTMDQVMIICRVLKREKIGRMERGQKSRSSVKRRRSKVTKNFRDSSDEDDDEEEEEKCSAPKCVRPKGRKFVDWVQCDGPCEKWFHMKCVGVQKTQVTNESDFYCDKCASRNNNQRRGSMRDRTLDQQCTVTRPAVSNIAGSLAVELMTTLLQHELREFAPAFVVTSSANREDAEVIPEGILGVLPHSIRGVISSFEQILPATEKFPQCIACSELVAADVVQKYEERWNTGVTNCMELFFASTGREPPYLPFLPELKVVYDALDDGSIEDLAEARLQAIERFADEKYIFNCPEFLKKVQVFFTELLSTKYTLVDDEKWVNYIVAILQKFSNYESEYTTTVAMFYYLLLAKCFETNRVQMKKGTDPNPEREEYFKRHLLVFLSAVPITYGVSRPAMDILSNLALSLFQSDETFYVLENCQLHLLINLLGIQHKSNKDVLHFLELMLGRASADVKKATVEYLGKHTKVLTLLLFKNESAQIQIAAIKLTLACQRVLANKIFLTHDETMQVYNKMCHSNNNMRELAKKFFILTHNKTDALVKGQTKTILEALIILITKKRDCMDSLSTIISLMWKNFPKQEQFIHEVCNIKGTDKRIAFKIHFLHIKKVMEPDVEIKYKRDAIESYLSKINMIIKVCDTDQGIFEIIVHTLLNMDLKTHYTPAFEVQLKTMVDFLMRKLLLCEFMPTLYLVNLVLRKIAEFNDYTKDRIKKMILDMSQNFIREVTGVAEDTALQLSAALYIHNVLDNMTKMRMFSLLGATKHFLDYNKAHTLPSVHHVFTIHAELLSAKWTFRSVDDEDLIREMEHFLDTHITPYMLTIEGDPLINLEVMQSFSVVITNFVSHAPTRGYAQWNLMQDTLLGYVQEVAFSMQPEETTSSDGHVSAPIPRTILETLLNLIECVQNADHQINKRFAKIIFLLAKSLIYPDLVHKSLEILFKLPKQFITMVGAVCHSFTFYPEEKTFKQFLHSVEDVLAAREPDQRVIKGCRIEIVEQYIQNVGRYITYKYELEEKQKAAEAKQKKVDAKKKEAEAKQKENENRLGVMKAIKDLVKSYTAEELNKLVETQQEYICQDYLNAKEKEILKSFVKFLKADHSDARTASPGPSTSVAGSSLSPHPSKAAEPKPGPSKPPRSPGPSTSKTGRLDFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-