Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947086385.1
Location
CAMTYR010000030.1:1248455-1255508[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-25 3e-22 78.3 0.0 2 89 108 191 107 191 0.94
2 2 3.3 4.2e+03 -2.3 0.0 70 85 970 985 942 986 0.64

Sequence Information

Coding Sequence
ATGTCCGAGAAGAATGTAATATGTACTGAAAAGGCGGCATCGTCGCATAACATGGATGAGAAGCCCCAGGAAATATCAAAGAACAAGTATGAGTTTGTGTTTGTGCGCCCTCCGGAAGCGCCTGTATTCAGACCCACTTTGGAAGAATTCAAGGATCCATTAGCCTACATAAATAAAATACGGCTAACTGCAGAGAGATATGGCATCTGTAAAATCATTCCTCCATCATCGTGGTCTCCACCGTTTACACTGGATGTAGACAGAATGAGATTCACGCCACGAGTTCAGCGACTAAACGAGTTGGAGGCGAAAACGCGTATCAAGCTCAACTTCCTGGATCAAATAGCAAAGTTCTGGGAATTACAGGGTAGCATGTTGAAGATTCCATTAGTCGAGAGACGCGCACTCGATCTTTATTCACTGTATCGCGAAGTGCAGGCCGAGGGTGGGATTGACGTGGCGTGTCGTGAGCGAAAATGGAGCAAAATTGCTAGTAGACTGGGATATCCACAGGGTAAAAGTGTTGGCACCATCCTCAAGAGTCATTACGAGCGCATTCTCTACCCCTTTGAGTTGTACACAACAGGAAAGAGTGTGGATCTGAAACTGGAACCAGACTCCGAAGATTGTGATTACAAACCACACGGGATTGTTTCGCGCCAGCAAGTAACACCGCCGCTTGAAACTACAGCACGCCGTTCAAAACGTTTCATTCAGAATACATCTACCGGTAATGGAATTGTAAAGGAGGAGGATTCACTCCCAAAGCGATACCAAATGACTCCTCGAATGCGGAGAGCGAAGCCAAAACGTGATGTGACAGTGGATCCACTGGCCAAGTACATCTGTCTGAACTGTAATCGTGGGGATGCCGAGGAAGCTATGCTGCTCTGTGATGGATGTGATGATTCTTACCACACTTTCTGTCTTATGCCACCCCTTCATGAGGTTCCCAAGGGTGATTGGCGCTGTCCCAAATGTGTCGTGGAAGAAGTAAACAAACCAATGGAAGCTTTCGGATTTGAGCAGGCGCAGCGCGAGTACAATCTTCATCAGTTTGGCGATATGGCGGATGCGTTTAAGAGCGATTATTTTCGAATGCCCGTAAATCGCGTGCCTGTGGATTTAGTTGAGTATGAATTCTGGAGAATTGTGTCATCAATTGATGAAGACGTGACAGTGGAATATGGTGCAGACTTGCATACAATGGATCATGGCAGTGGCTTTCCCACACGCAGTGCCCTTTATCTTCATCCGAGTGATCAGGAATACGCAGAGTCTAGCTGGAATCTCAACAACTTACCGCTGCTCGAGGACTCCATACTCGGTCACATCACAGCTGATATCAGTGGTATGAAAGTTCCGTGGATGTATGTTGGCATGTGTTTTGCCACATTCTGCTGGCATAATGAAGATCACTGGAGCTATTCGATTAATTATTTGCATTGGGGTGAGCCTAAGACATGGTACGGCGTACCTGGTGCTCAGGCGGAGCGCTTTGAGCAGACAATGAAGCGCGAAGCGCCAGAGTTATTCGCTAGCCAACCAGATTTGCTGCATCAACTGGTGACTATAATGAATCCAAATGAGTTAATGAATAACGGAGTATCAGTGTATCGCACTGATCAGCACTCTGGCGAGTTTGTAATCACTTTCCCTCGCGCCTACCATGCTGGATTCAATCAGGGTTACAACTTCGCTGAAGCCGTTAACTTTGCACCCGCTGACTGGCTGAAAATGGGCCGCGAGTGTATTAATCATTACTCAACTCTGCGCCGGTTTTGTGTTTTCTCTCATGATGAACTCGTGTGCAAGATGGCTCTGGAGCCTGATAATCTTAACATGGGTATTGCTACGGCTTGTTTCCTTGACATGGCTGAAATGGTGGACACAGAGAAAAAATTAAGAAAATCATTACTTGAATGGGGTGTCACAAATGCTTTGCGTGAGCCTTTTGAGCTACTTCCCGATGACGAACGTCAGTGTGACAGCTGCAAGACCACCTGTTTCTTATCCGCTGTCCAATGCGAATGTACGGGGGCCTTAGTTTGCCTTCGCCACTATTCTGAGCTGTGCAAAAAATGTCCTCCTACAGGACATACACTCAAATATCGTTACACTTTAGACGAGCTACCGCTGATGCTGCGACGACTTAAAGCTAAAGTGGAGACTTTCGAACGTTGGGTACAGCGCGTTCGTATTGCTATGATACCTGGTGGCGCAGAAAAAATTACCATTCAGAACTTGCACGCGCTTGTGACGGAAGCTCGTGAAAAGCATTATCCACAGTCAGCCATGCTCGATTGCCTCGTGGAAAATCTTAACGAGGCGAATAAATGCGTTCGAGTGATACAGCAGCTTATGTATTATCAAGAGCGTGCTCAGATAGCTGACACACCCTACAGACTCACGCTCGACGAGTTAGACCTGTTTGATCTTGAAATTCGAAATCTTTGCTGCACAATTGGTGACACAGCCATTGTGCGTGATCTGCACAAAACAGGCATGCTTATCACACAGCGGGCACAAGAAATGCTTACCTGTCCACTTAGCGACATTGACCTTAATGATATTCGGACAACCATTGATGAAGGAACTGCAACGTGCCTTGATCTGCCCGAGGTAGAAAGATTGCGATTGCGCTACCGCCAGGTTGATGTGTACGCTCGAATTTTAGCTGCTCGTGAAGGCAGTGGTGACCGCGTAAGTTGCCTAAGAGGATTGCTTGTAGAAGGCCTAGGTCTAAGTCCGGAACCGCAGTTGGAGGAGCAGCTGGTAAAGTTACAGCGCGAATTGCGTGTGGCAGAGGAATGGTTAGATGAGGTGCATGAAGTGCTAGAGGGTAGTTCTATTGTGAATATAAGCCAAGTGAGAACTCTCGTAGAGCGTTGTGATGGTCTCATGGATTCCACAATGAATGCACAGCGTCTCTATGAGGCTTATCAGCGCTACCTCAAATGGAATGAATTATACGTGGGAATGCAATCAAAGAAGGAGTATCCATACCTCAGGAGTATTGAAGAGGCCGTTGTAATGGCGTTAGACATCTCATTTCGGACTTCCGATATTCACGATCTCATCACACACTTTAAAGCAGCTCTAAAGTGGAGAAAATTCGTTAATAGGGCATTCGTGCGTAAATCTACTACTTTTACGCTTATCGATGTGTTACCGCCACGCACAAGCGCAGTAATGCCGAGCATCTTAGACGCCGATGGACGTGACAATGACGAGCGGGAATGGGGTGTTAGCGACGAGATGACACCTGCGGAGGCAATTGAGTCATTTAAACGCGGGGAAGAGCGTGAATATTTAGATATGAAGGAACTGCGAGAGCAAAATTCAACAAAAGATCCAACGCGCGATAAATATTGCATATGTGGAGCGGAGTTCAGTGAAAAAACAATGAATAGGTGCCAGCTGTGCCTAGACTGGTTCCATTACACATGTGTGCCAGCAGCACGCACAAAGGCGTCACGTGAATGGCCTATTGACCCAAGTATGCCGTCTACTTCGGCAGCGGCTATGCGCAGTATGGGTGCTATTGAAACTGAGGTTCGCTTTCTATGTATGTCATGCCAGCGTTCACGACGACCACGACTCACATGCATATTACGTCTGCTACAGGCTCTCAAGGATATTCCTATTCGTATACCGGAAGGTGAAGCTCTGCAGTATCTCGCAAAACGGGCTATTGATTGGCAAGAACGTGCAAATAGTGTATTAGATAGTGACGAGGTAATATCCGTATTGAGACAAATATCAGCAACTGCGCCTAAAGAACCAGAGTCCGATACTAAAGATAAAAAGGGTCGGGAGATCGAGCATGCCTATTCTGTACCCACTTTAGATGCGGAGGTAAAACTTAGCGCTGATACACTACAACAACTGGATAGTTTGTTGTTTGAGGCAAATCTAATAGAAGTCACCACAGAGCAGAGTGTTCTCATATGGCGGATCCTAAAGCGAGAGAAAAAAGACTCGTATAACTCTTATTATAGTCCGAGAAAGGCGGATAAATCTAAAGTTAAGGGGCAATCGAAGAAAACAATTTCCGATGATGACGACGAAGAGGGTGAATGCAGTGCGCCAAAGTGTATTAGACCAAATGAGAGAAAATTTGTGGACTGGGTGCAGTGCGATGGCGGATGCGAGAAATGGTTCCATATGAAATGTGTCGGCGTGCACAAGACACAAGTGACCGACGAAGTGGACTTTTATTGTGGAAAATGTACTGAAACTACAAATACGCGCACTGAAGAAGGAAATCACGATACTGGAGATATGTTTGAAGTGCGACGTGAACTGTCATTTGCTGAGTACGTGAAGATAGACGAGGAGGAATCAACGCATCGGTCACCTTGCAGTTACGATGGTCTCTTTGGTTCCGACAGCGAGCTAACTTTCGAGGAAGAAATTAAACAACTGAAAGAACTCACAAGGAATTGTAAGAGTCGACGAAAGTTGGAGAAAAAGTAG
Protein Sequence
MSEKNVICTEKAASSHNMDEKPQEISKNKYEFVFVRPPEAPVFRPTLEEFKDPLAYINKIRLTAERYGICKIIPPSSWSPPFTLDVDRMRFTPRVQRLNELEAKTRIKLNFLDQIAKFWELQGSMLKIPLVERRALDLYSLYREVQAEGGIDVACRERKWSKIASRLGYPQGKSVGTILKSHYERILYPFELYTTGKSVDLKLEPDSEDCDYKPHGIVSRQQVTPPLETTARRSKRFIQNTSTGNGIVKEEDSLPKRYQMTPRMRRAKPKRDVTVDPLAKYICLNCNRGDAEEAMLLCDGCDDSYHTFCLMPPLHEVPKGDWRCPKCVVEEVNKPMEAFGFEQAQREYNLHQFGDMADAFKSDYFRMPVNRVPVDLVEYEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTRSALYLHPSDQEYAESSWNLNNLPLLEDSILGHITADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAQAERFEQTMKREAPELFASQPDLLHQLVTIMNPNELMNNGVSVYRTDQHSGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSTLRRFCVFSHDELVCKMALEPDNLNMGIATACFLDMAEMVDTEKKLRKSLLEWGVTNALREPFELLPDDERQCDSCKTTCFLSAVQCECTGALVCLRHYSELCKKCPPTGHTLKYRYTLDELPLMLRRLKAKVETFERWVQRVRIAMIPGGAEKITIQNLHALVTEAREKHYPQSAMLDCLVENLNEANKCVRVIQQLMYYQERAQIADTPYRLTLDELDLFDLEIRNLCCTIGDTAIVRDLHKTGMLITQRAQEMLTCPLSDIDLNDIRTTIDEGTATCLDLPEVERLRLRYRQVDVYARILAAREGSGDRVSCLRGLLVEGLGLSPEPQLEEQLVKLQRELRVAEEWLDEVHEVLEGSSIVNISQVRTLVERCDGLMDSTMNAQRLYEAYQRYLKWNELYVGMQSKKEYPYLRSIEEAVVMALDISFRTSDIHDLITHFKAALKWRKFVNRAFVRKSTTFTLIDVLPPRTSAVMPSILDADGRDNDEREWGVSDEMTPAEAIESFKRGEEREYLDMKELREQNSTKDPTRDKYCICGAEFSEKTMNRCQLCLDWFHYTCVPAARTKASREWPIDPSMPSTSAAAMRSMGAIETEVRFLCMSCQRSRRPRLTCILRLLQALKDIPIRIPEGEALQYLAKRAIDWQERANSVLDSDEVISVLRQISATAPKEPESDTKDKKGREIEHAYSVPTLDAEVKLSADTLQQLDSLLFEANLIEVTTEQSVLIWRILKREKKDSYNSYYSPRKADKSKVKGQSKKTISDDDDEEGECSAPKCIRPNERKFVDWVQCDGGCEKWFHMKCVGVHKTQVTDEVDFYCGKCTETTNTRTEEGNHDTGDMFEVRRELSFAEYVKIDEEESTHRSPCSYDGLFGSDSELTFEEEIKQLKELTRNCKSRRKLEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-