Basic Information

Insect: Philotrypesis tridentata
Gene Symbol: -
Assembly: GCA_018906965.1
Location: JACCIB010000008.1:564301-568931[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.36 57 5.5 5.8 1 23 340 362 340 362 0.97

2 19 0.00041 0.064 14.8 0.3 1 23 411 433 411 433 0.98

3 19 0.013 2 10.1 0.5 1 20 490 509 490 511 0.94

4 19 0.035 5.5 8.7 2.4 2 23 552 573 551 573 0.97

5 19 0.0042 0.67 11.5 0.4 1 23 620 642 620 642 0.97

6 19 0.0003 0.047 15.2 0.1 1 23 648 670 648 670 0.98

7 19 0.0017 0.27 12.8 4.0 2 23 710 732 709 732 0.90

8 19 0.51 81 5.0 0.5 2 15 741 754 740 763 0.76

9 19 0.00012 0.019 16.5 1.2 2 19 796 813 795 818 0.89

10 19 0.00014 0.021 16.2 0.3 1 23 851 873 851 873 0.93

11 19 0.12 20 6.9 0.1 2 20 929 947 928 947 0.95

12 19 0.079 12 7.6 0.1 2 23 966 987 965 987 0.96

13 19 0.0034 0.54 11.8 5.0 1 23 1011 1033 1011 1033 0.97

14 19 0.0039 0.61 11.7 5.2 1 21 1052 1072 1052 1076 0.89

15 19 0.038 5.9 8.6 0.6 2 23 1135 1157 1134 1157 0.93

16 19 0.003 0.47 12.0 1.0 2 23 1185 1207 1184 1207 0.89

17 19 0.00098 0.16 13.5 0.5 1 23 1214 1238 1214 1238 0.94

18 19 0.052 8.3 8.1 1.3 1 23 1243 1266 1243 1266 0.94

19 19 0.013 2 10.0 0.4 3 23 1298 1319 1296 1319 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.36	57	5.5	5.8	1	23	340	362	340	362	0.97
2	19	0.00041	0.064	14.8	0.3	1	23	411	433	411	433	0.98
3	19	0.013	2	10.1	0.5	1	20	490	509	490	511	0.94
4	19	0.035	5.5	8.7	2.4	2	23	552	573	551	573	0.97
5	19	0.0042	0.67	11.5	0.4	1	23	620	642	620	642	0.97
6	19	0.0003	0.047	15.2	0.1	1	23	648	670	648	670	0.98
7	19	0.0017	0.27	12.8	4.0	2	23	710	732	709	732	0.90
8	19	0.51	81	5.0	0.5	2	15	741	754	740	763	0.76
9	19	0.00012	0.019	16.5	1.2	2	19	796	813	795	818	0.89
10	19	0.00014	0.021	16.2	0.3	1	23	851	873	851	873	0.93
11	19	0.12	20	6.9	0.1	2	20	929	947	928	947	0.95
12	19	0.079	12	7.6	0.1	2	23	966	987	965	987	0.96
13	19	0.0034	0.54	11.8	5.0	1	23	1011	1033	1011	1033	0.97
14	19	0.0039	0.61	11.7	5.2	1	21	1052	1072	1052	1076	0.89
15	19	0.038	5.9	8.6	0.6	2	23	1135	1157	1134	1157	0.93
16	19	0.003	0.47	12.0	1.0	2	23	1185	1207	1184	1207	0.89
17	19	0.00098	0.16	13.5	0.5	1	23	1214	1238	1214	1238	0.94
18	19	0.052	8.3	8.1	1.3	1	23	1243	1266	1243	1266	0.94
19	19	0.013	2	10.0	0.4	3	23	1298	1319	1296	1319	0.95

Sequence Information

Coding Sequence: ATGGAGGACGTCGTCGAGATAAGCAGCCTCGAAAACGCTTGCCGCCTCTGCCTGACCACCGAGCAAACGAGGTCCTCGATATTTGGCGTGCCGCACGTCTCGGTGCCCTTCGCCGAGAAGATACGCGCCTGTCTGGCCATACAGGTCACTGCTAGCGATAAATTATCGACATTGGTATGTACAACGTGCATAAAAAATATCAACCACTGGCACTCGTACAAGGATGTGTGTTTGCGCTCCCAGGAAAAACTTCAACAATGGCTGACTTCAAAGCAAAACACTGCGGTTGTGCCGATGGTGACCATAAAAGAGGAGCCGATGGATGAATCCGTTCCAAAGACGACCAATGAATCTAGTGCTACCAATCATGCTGTACAAAATGGTATGGATGTCGACCCATCAACGAATACCACTGCCAATGCTGTGGCTCAAAATTTGGAATTTGAAAAATCTTCTAATATTGAAAATGATAAAGAAATACTTCCAGAGGTGCAAATCAAAACTGAACCATTAGATACAGAAGATGAAGATGATTGTAATGTAGATGTGGAATCTGTAAATAGTGGAGAACTTTTAATTAATCCTATGGCAGTGGCAGCTAACAATGGAAACGCCGATAGAATTATGGAAGCAGACTCTACACAAAAATTTGGCAGAAGAAGGTATGCAGCAAGAAAGAAATTTCGTCGTGGACCTCATACACACTTCAGAGGTGCCAAGTTATTCAAGAAAAAATGTATTCATTGCAAAATTTACTTGCATTCAAAGCATTCATTCATTCAACACATGTCTCGATACCATGGTATTGTCAAGAACTTAGAATCAAATGAAGTTGTTAGAGTTGTAACTCAACCAACAGTAAAAAAGCAAAAATCAAAGCTCTCTGAACATCCTGACAATGCAGAACTTGCTTCAGAAATACAAGAAAATAATCCTGAAGATGCGGAATTTGAACAGATGATAAAAACTGACCCTCTTACACCAGTACAAAAGAACATTATTGGTCAGTTGAAAACCTTCTCTTGCTATTCATGCAAACAAACCTTCTTCGACAGGAGACACACTTTAAATCATATAAGGCAGCACATGCCTGATTTAAGGCCATACACATGTATTGCTTGTCTCACTGAATTTTCCGATAGGTCCATGTACAAACTTCATTGTAGTGCGTCCTTTGAGTGTGCTATGAAGATTGCTCTTGTAGTACCAAAAGGAGGTAACGAGAAGTACTTTACATGCAACATGTGTCTTCGACCCTTTGCAAATCGAAGGGAATTATTAACCCATTTGGCTATGCATGCAGATAAGCAGCACCAACAATTAGACGACCAACCCTTAAGGTCCCCATCAAAACTTAATCCTGCAGTTACGCCTTCACTGGCTCCCGCAGCGGAGTCTTCGCCTTCTAAACGTTCCATTACCAATAAGATCGCAGGGCCTTACATGAATGGTGATCCAGCACACAATCATACTTGTGACCTTTGCGGTATGATATATAGGTATAAACCTAACATGTTCAAGCATCGGGAACTCTGTTCTTCTTTAGCAGAGAATATTCGCACGTCCTACAGATGTGTTCACTGCAGTATGACTTACCTTGTTTACAAGAAGTTCTACTCGCACGTGTTCAGTGATCATAAGAAGCGTGAAATCACTTGCTTTACTTGCCATGCGAAATTCGCTACAGCTGATGAATATCTTTCTCATCACGAGACACATCGAGTTTTTCCAAAGGACAAAGAAAACGTTAATGAAGGCATGAATGAGCAGCATCATCAACCGCAAATGGAGAACGACAATTCGTCAACGGACGATAAAAATATCTCTGGCGATCCCTCGAATGCCAATGAAAAGCCATTCAATTGCGCTCTTTGTAGCGAAAGGTTCGCTACAAAACTCGAACTAACAGAGCATCGCAATCTTCATTTGAAGGTAAAGATCTACTCGTGCGTGATATGTCGTAGCATGTTTAGTAGCTCTGGAGCTCTCGAGGTGCACATGAAGGAGCATGGCATCGATGATGCAGTCGAGCAGAATGCCAATAGTTCATGCATTGAATACAACTCTCAGAGCAATATGAATGAGTCGTCTATGTCAGCTACATCTGATCCAGGAGGAAAATTCCATCATTGTTACCCATGCGGTAAGAACTTTTCTAATTATGCTAATTTGAAGAGACATGAGAGAAATCTCCATGTTAAAAATATGAAGCGCCGTTGGAGCTGCGATGTTTGTAAGCGACGTTTCAAATCAGCGCAATCTCACGATGAACATGTGCTGTCGGCTCACGGAATGCATCCATCTCAAGTACCACGACAGCAACAGTCAGCACAACCAATGGTTTCACCACAGCCCCAGTTTTCTTCTACTGGAAAACCGCTAATGCAATGTCCCAAGTGCCCGAAGACTTTTACTTACCAAGGAAATCTTATCCTTCATTGTCAGAATATCCATAAAGAAAATCATTTCGAACCAGTTCCACCCATCGCTATGCGGCAATCAGCACCACCGGCTCCCCGTCGTCCAATGCCTATGGTAACAGCCCGTGGTTACGCTTGTGATCTTTGCGGAAAATCCTTCCGCGAGGAACAGTCTCTTAAGACTCATCGTGGCTGGCATTTACGTACCAACTATCGATTAAAAGTCGATCAAATTAATCTCAACGAAAGTACTGCAAGTGCCCCTGGATATACAGTAACATCGTCTGTACCAAAGCCAGCCAAAGCAAGGAAATCTTTCCCCAACAATCCATCCCAGAAGCAGCTGAATGCTCTTACGAGTTTACAATGCCAGGTATGCGACGACCGCTTTGCTAATGTGGAGATGTTGAGAAAACATCTTTGGGACGTTCATTGCGCTCGCAACAAACCAGAGAAGTCCTTTACAACTGATTTGCAGTGTGAACTTTGCACTAACAAGTTCCTTGATGAAGAAGCATTGGAGAACCACATGAAGTGGCACTCACAGAATCCTATACTCAGTAGACCGATAAATAACCGAGTCTCAGTAACTGAAGTTCCTAAAAAGAATTTCTGTTGTGATGTTTGCGGTAAATACTACAGCAATCGCAAACTTTTCTTGCGTCATAAGAAACTACACAAGGTTCTTCCCGTTGGTACCATGATGAATCTGCATTCGCTGCAAACCAGACGCCATTACTGCCACGCTTGCCAGAAAAGCTTCTCTACCGAAGCTTCGCTACGGCGACACAAAGCTTCACCCTGCCATCAACAAAATGCACGTTTACAGGCGCAGGCTTCCAAGAAAATCACGACAACAGCGTTGGTACATCATCCACCTCCGGATACTGTGACTGAAATAAAAAGCGAGCCTCCCGAGATAGATTACTCTAATTTACCTACGCACGGCGCTCACGGGCAACTCTTAAAGAAAAGACCGGTAACTTGTCACATTTGTAAAATGATTTTCCCGAACATGAGTGTACTTTATCAACACAAGCAGCTAGCACACAAGCAATCCGCTATTCCCAATAAAAGTCCAGCTCCCTCGACGAAAGAATGTGTGCCTCAAGTTAGTAGCCAAGGTCTCGTCTCTTGTAACCTTTGTGGTAAACAATTCCCTGGAATTTCAAATCTAAAACAACACTTTGCTCACAAGCATAAGACCAAGGGATCTTCTTTCCCCTGCTACGCGCAGAATTGCAACCTGGTTTTCAGCAGCCTCAGCTCATTAAAGAATCATGAAACAACACATGCAAGTATGATTTTCAACTGTCAGTTATGCAACAGGCACGTGTTCTCTAGAGCCGCAATGACCAAACACATGCTGGCTATGCACAAGGCTATTTACCAGTCTAGTGGTAACAAAAGCACTCTTTGGACTGAAACAGATCTGACAAATTATCATATAAAAAATTGCCAGACCACAGCGTGTCCTAAATGCAAGGTGAAGTACCCCAATTTGCGAGCACTAAAGATTCATTATCTGAAGTTCCACGATAATAAGTAG
Protein Sequence: MEDVVEISSLENACRLCLTTEQTRSSIFGVPHVSVPFAEKIRACLAIQVTASDKLSTLVCTTCIKNINHWHSYKDVCLRSQEKLQQWLTSKQNTAVVPMVTIKEEPMDESVPKTTNESSATNHAVQNGMDVDPSTNTTANAVAQNLEFEKSSNIENDKEILPEVQIKTEPLDTEDEDDCNVDVESVNSGELLINPMAVAANNGNADRIMEADSTQKFGRRRYAARKKFRRGPHTHFRGAKLFKKKCIHCKIYLHSKHSFIQHMSRYHGIVKNLESNEVVRVVTQPTVKKQKSKLSEHPDNAELASEIQENNPEDAEFEQMIKTDPLTPVQKNIIGQLKTFSCYSCKQTFFDRRHTLNHIRQHMPDLRPYTCIACLTEFSDRSMYKLHCSASFECAMKIALVVPKGGNEKYFTCNMCLRPFANRRELLTHLAMHADKQHQQLDDQPLRSPSKLNPAVTPSLAPAAESSPSKRSITNKIAGPYMNGDPAHNHTCDLCGMIYRYKPNMFKHRELCSSLAENIRTSYRCVHCSMTYLVYKKFYSHVFSDHKKREITCFTCHAKFATADEYLSHHETHRVFPKDKENVNEGMNEQHHQPQMENDNSSTDDKNISGDPSNANEKPFNCALCSERFATKLELTEHRNLHLKVKIYSCVICRSMFSSSGALEVHMKEHGIDDAVEQNANSSCIEYNSQSNMNESSMSATSDPGGKFHHCYPCGKNFSNYANLKRHERNLHVKNMKRRWSCDVCKRRFKSAQSHDEHVLSAHGMHPSQVPRQQQSAQPMVSPQPQFSSTGKPLMQCPKCPKTFTYQGNLILHCQNIHKENHFEPVPPIAMRQSAPPAPRRPMPMVTARGYACDLCGKSFREEQSLKTHRGWHLRTNYRLKVDQINLNESTASAPGYTVTSSVPKPAKARKSFPNNPSQKQLNALTSLQCQVCDDRFANVEMLRKHLWDVHCARNKPEKSFTTDLQCELCTNKFLDEEALENHMKWHSQNPILSRPINNRVSVTEVPKKNFCCDVCGKYYSNRKLFLRHKKLHKVLPVGTMMNLHSLQTRRHYCHACQKSFSTEASLRRHKASPCHQQNARLQAQASKKITTTALVHHPPPDTVTEIKSEPPEIDYSNLPTHGAHGQLLKKRPVTCHICKMIFPNMSVLYQHKQLAHKQSAIPNKSPAPSTKECVPQVSSQGLVSCNLCGKQFPGISNLKQHFAHKHKTKGSSFPCYAQNCNLVFSSLSSLKNHETTHASMIFNCQLCNRHVFSRAAMTKHMLAMHKAIYQSSGNKSTLWTETDLTNYHIKNCQTTACPKCKVKYPNLRALKIHYLKFHDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286670;
90% Identity: -
80% Identity: -