Basic Information

Insect: Philotrypesis tridentata
Gene Symbol: -
Assembly: GCA_018906965.1
Location: JACCIB010000004.1:7847150-7849929[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0037 0.58 11.7 1.7 1 23 235 257 235 257 0.98

2 7 4.4e-05 0.0069 17.8 4.7 2 23 415 436 414 436 0.97

3 7 1.1e-05 0.0018 19.6 0.8 1 23 442 464 442 464 0.98

4 7 6.1e-06 0.00096 20.5 1.9 1 23 470 493 470 493 0.93

5 7 7.9e-08 1.2e-05 26.4 0.7 1 23 499 521 499 521 0.99

6 7 4.5e-07 7.1e-05 24.1 2.6 1 23 527 549 527 549 0.99

7 7 5e-07 7.9e-05 23.9 0.6 1 23 555 577 555 577 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0037	0.58	11.7	1.7	1	23	235	257	235	257	0.98
2	7	4.4e-05	0.0069	17.8	4.7	2	23	415	436	414	436	0.97
3	7	1.1e-05	0.0018	19.6	0.8	1	23	442	464	442	464	0.98
4	7	6.1e-06	0.00096	20.5	1.9	1	23	470	493	470	493	0.93
5	7	7.9e-08	1.2e-05	26.4	0.7	1	23	499	521	499	521	0.99
6	7	4.5e-07	7.1e-05	24.1	2.6	1	23	527	549	527	549	0.99
7	7	5e-07	7.9e-05	23.9	0.6	1	23	555	577	555	577	0.97

Sequence Information

Coding Sequence: ATGGAAGTAACAACGGAAGAGGAAGCTCAAGCAGTTTTGCTGGAGAGCATGGAAGGAACACAATATATTACAATACAGCGAGCAGATGGGGAAAGTCTTGGCAAAGGGGTTCCTCTTTTTGCTTTAAATGGGGAACTAATATCAGAAGGAATGGTTGTTGATATGATCAATGGGGTTGGAGCAGATTACAATACAGGCACGCAATACTATGAGACTGAAGATTTACTGCCCCACGTACTAACAGAGGAGGATCGAAGACTGGCTGCAGCTCTTGTTGCAGTTCAATTGCAACAGCAGCAAAAGCAACAACAAATTCACACTCACCCTAACGATGATGATCCAACACTACAAGATGTCACACAGCTGGAAAGTCTACCTCCTGTCAATACTTACGCAATTGAAGCAATTCAAGAACCTAATCCACCTCCAGTTTACCCTTCGATGCAAACCTTTAAACGAGGACTGCACCAAGTGAAACCAGAATTCATTAACGTAAAGTGCGAAGACGATGTAGATATTTCTGCAGAAAGTAGTGAAGATGCAGTTCCTACTCCTGGACCTAAGAGGTCGTTACCCCACAAAAAAAGAATACCCCGAAAATTAAAACAACAGAGTAAGAAAAGTGTTGTTAAAAAAGAGAGCTCCAGATTTCATCAAACTGATGTAATGACGTTAGAAACATCTAAAAATCAAGCCAATGCCTTTAAATGTGAACTTTGTGGAAATAAATTTAGTGGACAGCTTAAATTTTTTGAACATTTAAAGTCACATTATGAGCCTGTGAAGGAAGAAAAGAAAATACTAAACCTACCTGTAAATAATAACACTTCAATAGCCATACCTAGCATGCCTGAAGCAACAGTTCATGGAGTTATTGAACACACAATAGAAGAGTTTAGTGAACCTGAAGACATTATGGAAGGAATCAGAGACGTTGTTGAGGAAACTGGAGCGCACATCGACGACGATGACGAAGATGATGAAATAGGAGAAGATGCTCTGCATGATTCTAACAATTCGTCTTCAATATGGACTATATCAGAGGTGCCAGAACAGATGGAACATATTGAACAGATGGAGCAAATTGATCAAATGGATCAAATTGAACAAATAGAGCAGGAAGAACTAGAAGGACCATCTACGATAAATGAGGAGGATCTTTATGAAAGAGAACCAGTCAAAATAGTAGAGCAAGTCAAGAAAAAGAAATCGAAATCAAAAAAGTCAAGTGCAGATGAGCTAACTTGTCCAAACTGTGATAGAACGTTCCATCACAAAAATAGTCTAGTATATCATATGCGTTCTCATAGCGGAGAAAGACCTCACCAATGCGAGGTTTGCGGGAAAAGCTTTTTTGCTGCAAGCGCACTCAAAGTTCATAAGCGGCTACATAGCGGTGACAAACCATACAAATGCGAGGATTGCGGGCGACATTTCCGTCAGTGGGGTGATCTTAAATACCACTCAACAAGTCTTCATTCTGAGCAGCGCCAATTCCAGTGCGAATACTGTGGCAAGGATTTTGCACGCAAGTATTCACTGATTGTGCATCGGCGTATCCATACCGGCGAAAAGAATTACCGGTGCGAGTATTGCAACAAGACGTTTCGCGCAAGCAGCTATTTGCAAAATCATCGTAGAATACATACAGGCGAGAAACCACATCCGTGCGACGTATGTGGCAAGCCCTTCCGTGTACGAAGCGACATGAAGCGACACATGGCTACACATTCACGCACTACTAATCGAGATAGACTGCAGAATAAAAATGGCACAATGAAAGCACAAACGAATGTGAGCGATGCGAGCAGCGATGACAGTATGAACAAAACCAGTAGAACAATAAACGAGATAGTTCACGAGTTAAAACTCGAGGTGGATCCTAATACGTCAGTTGTCGAGCTCGTAGGAGGTAGTGGAGAAAACGAGAGTATTCTGCCACATGTGAGCGTGCAGACTCTCGAATACGCACAGGCGGTGGTCGCATCGCAAACTGTTGCAGGGACCAACGGCGAGATGCCGGGTGAACGGGATCCTCTTGAAGCTGTCGTCGGTCGAACTGCAGATACTTTAAACTTTGACATGCAAGTATTCTATTGA
Protein Sequence: MEVTTEEEAQAVLLESMEGTQYITIQRADGESLGKGVPLFALNGELISEGMVVDMINGVGADYNTGTQYYETEDLLPHVLTEEDRRLAAALVAVQLQQQQKQQQIHTHPNDDDPTLQDVTQLESLPPVNTYAIEAIQEPNPPPVYPSMQTFKRGLHQVKPEFINVKCEDDVDISAESSEDAVPTPGPKRSLPHKKRIPRKLKQQSKKSVVKKESSRFHQTDVMTLETSKNQANAFKCELCGNKFSGQLKFFEHLKSHYEPVKEEKKILNLPVNNNTSIAIPSMPEATVHGVIEHTIEEFSEPEDIMEGIRDVVEETGAHIDDDDEDDEIGEDALHDSNNSSSIWTISEVPEQMEHIEQMEQIDQMDQIEQIEQEELEGPSTINEEDLYEREPVKIVEQVKKKKSKSKKSSADELTCPNCDRTFHHKNSLVYHMRSHSGERPHQCEVCGKSFFAASALKVHKRLHSGDKPYKCEDCGRHFRQWGDLKYHSTSLHSEQRQFQCEYCGKDFARKYSLIVHRRIHTGEKNYRCEYCNKTFRASSYLQNHRRIHTGEKPHPCDVCGKPFRVRSDMKRHMATHSRTTNRDRLQNKNGTMKAQTNVSDASSDDSMNKTSRTINEIVHELKLEVDPNTSVVELVGGSGENESILPHVSVQTLEYAQAVVASQTVAGTNGEMPGERDPLEAVVGRTADTLNFDMQVFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01037274;
90% Identity: iTF_01036482;
80% Identity: -