Basic Information

Insect: Philotrypesis tridentata
Gene Symbol: -
Assembly: GCA_018906965.1
Location: JACCIB010000023.1:586347-589591[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00036 0.056 14.9 4.1 1 23 218 240 218 240 0.97

2 11 1.1e-05 0.0017 19.7 1.5 1 23 246 268 246 268 0.98

3 11 0.00023 0.036 15.5 2.0 1 23 274 297 274 297 0.95

4 11 0.0037 0.59 11.7 3.5 1 21 303 323 303 325 0.95

5 11 0.00011 0.017 16.5 1.9 1 23 331 353 331 353 0.99

6 11 7.2e-06 0.0011 20.3 0.3 1 23 359 381 359 381 0.98

7 11 0.00028 0.044 15.3 1.4 1 23 389 412 389 412 0.97

8 11 3e-05 0.0047 18.3 2.6 2 23 419 440 418 440 0.97

9 11 0.00011 0.017 16.5 0.3 1 23 446 468 446 468 0.99

10 11 0.0025 0.39 12.3 7.1 1 19 474 492 474 497 0.91

11 11 1.2e-07 1.9e-05 25.8 1.2 1 23 511 533 511 533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00036	0.056	14.9	4.1	1	23	218	240	218	240	0.97
2	11	1.1e-05	0.0017	19.7	1.5	1	23	246	268	246	268	0.98
3	11	0.00023	0.036	15.5	2.0	1	23	274	297	274	297	0.95
4	11	0.0037	0.59	11.7	3.5	1	21	303	323	303	325	0.95
5	11	0.00011	0.017	16.5	1.9	1	23	331	353	331	353	0.99
6	11	7.2e-06	0.0011	20.3	0.3	1	23	359	381	359	381	0.98
7	11	0.00028	0.044	15.3	1.4	1	23	389	412	389	412	0.97
8	11	3e-05	0.0047	18.3	2.6	2	23	419	440	418	440	0.97
9	11	0.00011	0.017	16.5	0.3	1	23	446	468	446	468	0.99
10	11	0.0025	0.39	12.3	7.1	1	19	474	492	474	497	0.91
11	11	1.2e-07	1.9e-05	25.8	1.2	1	23	511	533	511	533	0.98

Sequence Information

Coding Sequence: ATGTCAAACGTAACAACAATAAAGTTAGAGGGTAACCAGGAGTCGGTTACTGAAATACAAACCTACCTTGAGTCCTTCAATAAAGAAATTGAAGGTGGCACAGGAGAGCAGTTGCAGCATGTTCAGTTACAACAAGTAGAAGGACTTACGGGAGAAGATGGTGGGACATATTTTGTTGATCAAAATGGCCAGTATTATTACCAAGCTAGTGGGGACGACACACCTGTTCTTACACAAGTGCAAATACAAGAAGTAAATGAAGGAGATGGTCAACTTGAGGAAGCTGCTCATGAAGACCAGTATCAAGAAATAGAACAACTAGAACAAGTTGACACGGATAATGTACAAACATCTGATAATCAAATGGTTCTTAATTCAGGAGAAGCCTATCAAACTGTAACAATCGTGCCATCAGATTCGAATCCTGGAGAAGTGAGTTATGTTCTAATTGTGCAACAGCCTGATGGTGAAAAGAGTGAAAGAAAAATTGAAACCGAAAATGGTGAAGGTGAAGATGGAGAGCAAGATCTTACAGTTTACGATTTTGAAGATAATGAGGACAATGATGCTGCTGTTGAATCTGAGGTTGAAGATGATAAAACAAAAATTGTCAAATTTATTCCAAAGAAGTCTCAAACTGTCAGTCAAGCTCACATGTGTAACTATTGTAATTACACCAGTCCCAAGCGTTATCTTTTATCTCGCCACATGAAATCGCATTCAGAAGAAAGGCCTCACAAATGTAGTGTGTGTGAAAGAGGTTTTAAAACCTTGGCTTCACTTCAAAATCATGTCAACACCCATACTGGAACTAAACCCCATAACTGCAAATTTTGCGATAGCGCTTTTACAACTTCAGGTGAACTTGTGAGACACGTTCGATACAGACACACTCACGAAAAACCCCATAAGTGTAATGATTGTGATTATGCTTCTGTTGAACTGTCAAAATTGAAAAGACACATACGATGTCATACTGGCGAGCGACCATATCAATGCCCGCACTGTACATATGCAAGTCCAGATACTTTTAAATTAAAACGTCACTTGCGTATTCATACTGGTGAGAAGCCATATGAATGTGATATCTGCAATGCAAGATTTACTCAGTCCAATAGTTTGAAAGCTCATAAACTTGTTCATAATGTTGGTGATAAACCAGTTTTTCAATGTGAATTGTGTCCGACAACGTGTGGCAGAAAAACAGATCTCAGAATTCATGTACAAAAATTACACACATCCGATAAGCCATTAAAGTGTAAGCGATGCGGCAAAACATTCCCTGATAGGTACAGTTACAAACTGCACAGTAAAACGCATGAAGGCGAAAAGTGTTACAAGTGCGATCTGTGTCCCTACGCTTCGATATCGGCGCGTCATTTAGAAAGTCACATGCTCATTCATACAGATCAAAAGCCATATCAATGTGACCACTGTTACCAATCCTTCAGGCAGAAGCAACTTCTAAAGAGGCACTGCAATCTTTATCACAATCCTAATTATGTTCCACCGCCACCTCAAGAAAAAACGCATCAATGTCCAGAATGCGAAAGACCGTTCAGGCACAAAGGTAATTTGATCCGACACATGGCTGTTCATGATCCAGAGTCTTCATTGCAAGAAAAACAACAAGCATTAAAAATGGGAAGACAAAAGAAAATTCAAATAATTGATGGTCAAAGAGTAGAAGTTATGACAGGTGATATAGCTTCTAAACTTAAAGGTTATGAAGATGACGAGGATGAGGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGATATGATGGCAGTCGAAGGAAGTGATGGGACAGCAGTATGTTGTATTGGAAGTTATTCAATTACCGGACAGTCAAGCTGGAGAACAAGGAATGGCAGTTGTAGCTAG
Protein Sequence: MSNVTTIKLEGNQESVTEIQTYLESFNKEIEGGTGEQLQHVQLQQVEGLTGEDGGTYFVDQNGQYYYQASGDDTPVLTQVQIQEVNEGDGQLEEAAHEDQYQEIEQLEQVDTDNVQTSDNQMVLNSGEAYQTVTIVPSDSNPGEVSYVLIVQQPDGEKSERKIETENGEGEDGEQDLTVYDFEDNEDNDAAVESEVEDDKTKIVKFIPKKSQTVSQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHNCKFCDSAFTTSGELVRHVRYRHTHEKPHKCNDCDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICNARFTQSNSLKAHKLVHNVGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHCYQSFRQKQLLKRHCNLYHNPNYVPPPPQEKTHQCPECERPFRHKGNLIRHMAVHDPESSLQEKQQALKMGRQKKIQIIDGQRVEVMTGDIASKLKGYEDDEDEEEEEEEEEEEDMMAVEGSDGTAVCCIGSYSITGQSSWRTRNGSCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691377;
90% Identity: iTF_00287496;
80% Identity: -