Ptri017900.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philotrypesis tridentata
Gene Symbol
ZNF236
Assembly
GCA_018906965.1
Location
JACCIB010000019.1:3026517-3041989[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 8.8e-06 0.0014 20.0 0.8 1 23 181 203 181 203 0.98
2 25 0.00019 0.031 15.8 1.0 1 23 209 231 209 231 0.97
3 25 6.4e-06 0.001 20.4 0.1 2 23 237 258 237 258 0.98
4 25 0.01 1.6 10.4 2.2 1 23 264 286 264 286 0.95
5 25 0.0017 0.27 12.8 2.2 2 23 298 319 298 319 0.96
6 25 8.4e-06 0.0013 20.0 0.6 1 23 340 362 340 362 0.98
7 25 0.0002 0.032 15.7 0.9 1 20 368 387 368 390 0.96
8 25 2.2e-05 0.0034 18.8 0.3 1 23 396 419 396 419 0.97
9 25 0.00048 0.076 14.5 2.0 1 23 428 451 428 451 0.98
10 25 2.4e-07 3.8e-05 24.9 1.0 1 23 548 570 548 570 0.99
11 25 2.9e-05 0.0045 18.4 2.6 1 23 576 598 576 598 0.97
12 25 9.7e-05 0.015 16.7 1.1 1 23 604 626 604 626 0.98
13 25 0.00017 0.026 16.0 1.5 1 23 630 652 630 652 0.94
14 25 0.00011 0.017 16.6 5.7 1 23 710 732 710 732 0.98
15 25 2.3e-07 3.6e-05 25.0 0.7 1 23 738 760 738 760 0.98
16 25 0.00042 0.067 14.7 3.4 1 23 766 788 766 788 0.98
17 25 0.00026 0.042 15.3 5.7 1 23 794 816 794 816 0.97
18 25 0.00015 0.024 16.1 1.4 1 23 1133 1155 1133 1155 0.98
19 25 0.0013 0.21 13.1 2.0 1 23 1161 1183 1161 1183 0.96
20 25 1.3e-07 2.1e-05 25.7 0.9 3 23 1220 1240 1219 1240 0.98
21 25 7.5e-05 0.012 17.1 2.7 1 23 1246 1268 1246 1268 0.99
22 25 0.064 10 7.8 3.1 1 23 1289 1311 1289 1311 0.96
23 25 6.2e-06 0.00097 20.5 3.3 1 23 1499 1521 1499 1521 0.98
24 25 3.9e-07 6.1e-05 24.3 2.9 1 23 1527 1549 1527 1549 0.99
25 25 3e-07 4.8e-05 24.6 1.7 1 23 1555 1578 1555 1578 0.98

Sequence Information

Coding Sequence
ATGGAGAACATGGGATTTATGAATATGCTCACTGACGATGGCACTACCCTAGTGTCTGTTCACCAGAGAGAAGATGGAAGTCTAGAACTTGTATCAACTCCGGTGACAATCATACAAAACACGTATGATACAACTTCGGCACTGCAAGTGCTTAATGCTGCAAGTGCAAGCGTTATTTTTAATCAGATTGAAATTAACAATCTTCCACAAATTATTCAACAACCGAATATAGCTTCCATTGATGTGATAAATTTTGATACTCAAAGTGTGCCACAGGTGGCCAGTAACCAACAGTATTGTTGTTCCGAAATATCAAATAATTTATTACCTGAAAATGTACAACAAATATCAAATAAAGAAAATGCTGCAGCATTAGATATTGCAAAACCAGAAAAAGAAAGGGAAGAAAGTCAAGAAGAAACTTTTGAAGAATTAATAGAATTGAGGCCTAAGAAAGATTCACCTTCTAAACAGCATGCCACTAAAAGTCTTGGGAAGGCAAAAAAGCATAGTAAAATTACTAAAGAAGTGAAAATGTATTTTCGGTGCGACATTTGTGGTTTAGGATTCCGAAAACAATACTTGATGCAAAGGCATATGCAAGAACACGTACAAGAGAAACCTCATCACTGTCCAAAATGTCCTGCGTCATTTAATGTTCCAGTAAATTTCACTTTACACATGGCTACACACAACATAGGTGAGCCTAAATGCCCACAATGTGGACGAAAATTTGCTCGCATGGCTAGTCTCAAGGCTCACATGGCAGTGCACGAAGTGGACGAAAATCACTATTGTACTGAGTGCGAAAGCGTCTTTGAAACCAAGAGCCAGTTGGACACCCACTCGAAGCTGCACAGCGAAAAATGGTCAACGGACGAGTACAAGCGCAGCTGCAAGCTCTGCCGCAAGCAGTTCACTCAACCCTTTCTCTATCGCCAGCACCTGCGCGATCACTACAAAATGCAGAGCAAGTGCACGAAGCAGACGAAACGCGGAGTGAAGATCGGCACCGTTTACAAGTGCAGGCTCTGCCTCAAGTCTTTCGAAAAGCCCAGTCAACTGGCCAGGCACATCAGGGCGCACACGGGCGAGAAGCCCTACAAGTGCAATCTCTGCAGTCGAAGCTTCTCGCAAAAGGGTTCCGTGAGGATTCACATGTGGCAGCACAACGGCATCAGGCCCTACAGCTGCTCCGTTTGCAAGGCCAAGTTCAGTCAAAAAGGCAACTTGAACGCACACGTGCTGCGGGTGCACAAGATCCAGGAAGGCGTGCCGATGTACCGCTGTACGCGCTGTCCTTGCATTTTCAAGAAACTCGGCAGTCTGAACGGCCACATGAGGCGGGCGCACCCCGGGGACGAGGACGAGACGAACGAGGATAACGCAGCCGAGGATATAGAAAAGGGTCAGGAGCCGATCGCCGAACCTGGCGGGAACGACCTGGAGAGTCCGCCGGACTCGGCAGCTGCTGCGACGTCCGCCGAGGCCAACGAATTGTCGAAGCTCGTCGAGGACGGATTCGTTCCGATGAACGACGAGAAACAGACGGCCGTCGTCACGCTTCTCGATAAACTCGCCGACAATGCTAAAGGAAAATACGTCAAGATAAAGCAGCGACTTGTAAATAACTCTAGGCAGTACGAGTGCGATTTCTGCAAGAAAGTCTTCAAAAAGCCGTCTGACCTTATGAGGCATTTAAGGATACATACGCGAGAAAAGCCTTTTAAGTGCAAGACGTGCGGACGAACGTTCACGCTCAAGTCTACGTTAATGTCTCACGAGAAGCTTCACGAGAAGGCTGGAAAGTACAAGTGCCAAACCTGTTCGAAACCTTTCAATACGGAAAATTCTCTGAAATCTCACGCACAAATCCATGTCAAAATTCACACATGCATGATCTGCGACAAGACCTTTACGAGTTTCGAGGATTTACGAACGCATGCTTTGGATCATGCAGGCCATGCAGGCCGCAAAAAACCGCAAGTGCCACCAGAGGTGCAAAGTTTGGCACCAAAAGTGGTGTTGAAGGAACCACTTGTACTCACCGAATTGAGTGGAGGTCTGTTGCACGCCCAGCCGAAGTTCGGACGAACCAGCAAACTGGCTCATATCAAGGGAAGACCGCACAAGTGTCCAACTTGTCCAGCTGCTTTCACGAAGCTCAGTCATCTTAAACAGCATCATCGGATGCACACTGGTGAAAGGCCGTTTGTTTGCGCACTTTGCGATAGGACTTTTACAACCAATAGTGCCCTTAAAGCACATCGGCGAACGCACGACATGTTAAAACCTTACCAATGTACGGTATGCAAAGTGAATTTTTCCACATTGAGCAGTATGAAGAGGCATCATGTTACACACAGCAATAAAAGGCCATTTATGTGTCCCTACTGCAATAAAACGTTTAAGACAACGGTAAATTGTAAAAAGCACATGAAACTACATAAACAAGAAATCGCACAACAGCAAATTGAGAACTTGAAAAAACAAGAGCAATCATTAAATGTAAATGGGATGGATAAAGTCGATACAACAGATACCGTCAATAATCAGCAAATGATTTTTAAGCCTACTGAGACTGATATAACACAGAATTTTAATAAACAGCTTGAAATGTTAACTAAAAATAGTTACTCTTCTGATCTGAATTCGTCGTTGCCGCAAAACATTCAGATATCATGTCATCAAGGAAAGAATATATCCGTAGTAGAAAATTCTAACATAGGCGCAACCCAAACAATGCATGCCGATGAGACAGGCACTATTACCCTATCTAATTATACTGGTGACCCAACACTTACACCTGAAAGTTTAAGGGTAATTGAAGAGACTCTGAATCAACAATTATCTAATATTGGACTGAATATGGCGCTTAACAGTAGCGTAAGGCAGATCGAGGAACATAACAATACTTCTACAATTAATCATGATCAACCTACTTTAAGCATAATTTATGATAAAAATGTAGCATCACCTGTGACCACAAATACCCTGAATACAAATGTTTTTTCTCCTCAGTTTGAAACTTTTGATATTAATCATATGAGTCTACAGGGTGAGAACGAAATTGATCTAGGAATGATACAGAATAATTCACAAAATGTATCCAATATTCTACCGACAATAATCAATCAAAACCAAAATTATAGTTTACAATTTGTCAGTGACGAACTGTATTCAAGCACTATTCTCAAACAAAGTCAAATAAATCAATTGAAAGATAGTAACCAATCAAATGAACTAGTGAAAGTTACGATCGGTGAACAAGTTTGCAGTAATGCTGATAAAAGCAATGATAAAGAAAATAATCTACAATGCCACGTATGCAAAATGGAAAAACTTAGTGTTCATGATTTAAAGGAACATCTTAAAACTCACAAAGAAACCAAACAATTTGAATGTGACAAGTGTCTTAGCAAATTTCGTACTAATGCAGGCCTTAGCAGGCATATGAAGACTCACGACACGCAAGAGACACATAAATGCTATGAATGTAATCAAGTATTTTCCACAACTTTACAATTAAGAGAACACATAACTGAACATGTCAAACATGAATTGAAGTTGAAAAATGTTTTGGATGCCGATTCGATACCTAAGAACATTAAAAAGAAAAAAAAGAAAAATAAGGATTCTGAAAGTAAAAATAAGGCATGTAATTACTGCTCAAAGACTTTTCGAAAACCAAGCGATCTTATAAGGCATATCAGAACGCATACCGGTGAGCGGCCATATCAGTGCCAATATTGTGATAAAAGTTTTGCTGTCAAATGCACTTTGGATTCCCACTTGAAAGTGCATATAGTGTACATCGATAGCAAATTTAACATATTAGTGAATTTGTTTATAGGAACTAAGCCGTTCAAATGTTCGAAGTGCGATTTAAAGTTCTTCACATCTAGTCGCCGAAAAATTCATGAACTATCGCACACGCAAGAAAATAAGTCGGAAAGCCATACTTCTTCCATTGATGAAAATTCAGAATTAGTAAGCATCAAAACACCGACAGAATCTCTTAATGACACTAGAATTGTAAAAATCGTGCACACAATACCTGTTTCTCAACAGTTAGAACAACAAAATACAAACTCTAATAATGTCACGTTAAATCCGCAGATAAGTTTTAATGCGGACGATGGCTCAAGTTTATTGACTTTAAACGAAAATAATCAGTTAGTGGCAAATCTTGAGTTTTTGCTAGCCAATGGCTTAGTCAACATATCATCCGAAGGTCTGCAATTACCAGCGAACGACTGCATTGTGCAGAAAGTTGATGAACAGCTGGATCAAAATGGTGCACAAATCATTTTTGCCAACACAATACCGGAAATTGATGGGCAAATAAATCAAGAGACGCAGCAAGACATAAATAATATCCAGCTGAATAACTGCATGGTCTTGTCGCTAGATGATTTTAATCCTAATGTGGAAGAGAATAATGACGAGAACGCACTGAAGGGGGTTGATAATTTAACCACTACGGGACCACAATACAGTTGTGAACACTGCGGTAAATCGTTTTCCAAACCTTGCCAAGTTGAGCGACACGTACGCGTGCACACGGGTGAACGTCCGTTTCAATGCAAACTCTGTGAAAAATCTTTCTCCCAGAAATCATCGTTACAATCGCATTTAAAAAGTCACTCGGGTGAACGTCCTTACTCTTGTTCATATTGCGATCAAATGTTCACTCAAAGTGGTAATCTTCAGACTCACATACGTCGTAAACACAGTGCTGATTCGGGTAAACGACAACAATTAGTTAATGTTAGTTACTATGATCCAAGCAAGATTCTAATGTCGGATCAGCAGCAACTTACATTCGACAGGTCTCTCGGTCTTGAAGACATCTCGATTGTTGAGTTGCTTAATTGA
Protein Sequence
MENMGFMNMLTDDGTTLVSVHQREDGSLELVSTPVTIIQNTYDTTSALQVLNAASASVIFNQIEINNLPQIIQQPNIASIDVINFDTQSVPQVASNQQYCCSEISNNLLPENVQQISNKENAAALDIAKPEKEREESQEETFEELIELRPKKDSPSKQHATKSLGKAKKHSKITKEVKMYFRCDICGLGFRKQYLMQRHMQEHVQEKPHHCPKCPASFNVPVNFTLHMATHNIGEPKCPQCGRKFARMASLKAHMAVHEVDENHYCTECESVFETKSQLDTHSKLHSEKWSTDEYKRSCKLCRKQFTQPFLYRQHLRDHYKMQSKCTKQTKRGVKIGTVYKCRLCLKSFEKPSQLARHIRAHTGEKPYKCNLCSRSFSQKGSVRIHMWQHNGIRPYSCSVCKAKFSQKGNLNAHVLRVHKIQEGVPMYRCTRCPCIFKKLGSLNGHMRRAHPGDEDETNEDNAAEDIEKGQEPIAEPGGNDLESPPDSAAAATSAEANELSKLVEDGFVPMNDEKQTAVVTLLDKLADNAKGKYVKIKQRLVNNSRQYECDFCKKVFKKPSDLMRHLRIHTREKPFKCKTCGRTFTLKSTLMSHEKLHEKAGKYKCQTCSKPFNTENSLKSHAQIHVKIHTCMICDKTFTSFEDLRTHALDHAGHAGRKKPQVPPEVQSLAPKVVLKEPLVLTELSGGLLHAQPKFGRTSKLAHIKGRPHKCPTCPAAFTKLSHLKQHHRMHTGERPFVCALCDRTFTTNSALKAHRRTHDMLKPYQCTVCKVNFSTLSSMKRHHVTHSNKRPFMCPYCNKTFKTTVNCKKHMKLHKQEIAQQQIENLKKQEQSLNVNGMDKVDTTDTVNNQQMIFKPTETDITQNFNKQLEMLTKNSYSSDLNSSLPQNIQISCHQGKNISVVENSNIGATQTMHADETGTITLSNYTGDPTLTPESLRVIEETLNQQLSNIGLNMALNSSVRQIEEHNNTSTINHDQPTLSIIYDKNVASPVTTNTLNTNVFSPQFETFDINHMSLQGENEIDLGMIQNNSQNVSNILPTIINQNQNYSLQFVSDELYSSTILKQSQINQLKDSNQSNELVKVTIGEQVCSNADKSNDKENNLQCHVCKMEKLSVHDLKEHLKTHKETKQFECDKCLSKFRTNAGLSRHMKTHDTQETHKCYECNQVFSTTLQLREHITEHVKHELKLKNVLDADSIPKNIKKKKKKNKDSESKNKACNYCSKTFRKPSDLIRHIRTHTGERPYQCQYCDKSFAVKCTLDSHLKVHIVYIDSKFNILVNLFIGTKPFKCSKCDLKFFTSSRRKIHELSHTQENKSESHTSSIDENSELVSIKTPTESLNDTRIVKIVHTIPVSQQLEQQNTNSNNVTLNPQISFNADDGSSLLTLNENNQLVANLEFLLANGLVNISSEGLQLPANDCIVQKVDEQLDQNGAQIIFANTIPEIDGQINQETQQDINNIQLNNCMVLSLDDFNPNVEENNDENALKGVDNLTTTGPQYSCEHCGKSFSKPCQVERHVRVHTGERPFQCKLCEKSFSQKSSLQSHLKSHSGERPYSCSYCDQMFTQSGNLQTHIRRKHSADSGKRQQLVNVSYYDPSKILMSDQQQLTFDRSLGLEDISIVELLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-