Ptri035268.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- ZNF217
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000016.1:2548830-2555601[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 1.2e-05 0.0019 19.5 1.9 1 23 387 409 387 409 0.98 2 29 3.8e-06 0.0006 21.1 5.3 1 23 415 438 415 438 0.96 3 29 0.0013 0.2 13.2 0.1 2 23 445 466 444 466 0.95 4 29 2.7e-06 0.00043 21.6 0.4 1 23 472 494 472 494 0.97 5 29 2.5e-05 0.004 18.6 0.8 1 23 500 522 500 522 0.98 6 29 0.0065 1 11.0 1.7 1 23 528 550 528 550 0.97 7 29 0.15 24 6.7 4.7 1 23 556 579 556 579 0.95 8 29 0.00017 0.028 15.9 0.2 1 23 681 703 681 703 0.99 9 29 9e-05 0.014 16.8 1.2 2 23 710 732 709 732 0.93 10 29 0.0091 1.4 10.5 0.6 1 23 738 760 738 760 0.99 11 29 3.4e-05 0.0054 18.1 2.6 1 23 766 788 766 788 0.96 12 29 0.00053 0.084 14.4 0.6 1 23 794 816 794 816 0.97 13 29 0.00019 0.03 15.8 0.9 3 23 824 844 822 844 0.97 14 29 0.0014 0.22 13.0 0.2 1 23 943 966 943 966 0.96 15 29 0.00031 0.049 15.1 0.9 1 23 978 1000 978 1000 0.98 16 29 3.3e-06 0.00052 21.3 0.6 1 23 1025 1047 1025 1047 0.99 17 29 6.8e-05 0.011 17.2 0.1 3 23 1055 1076 1053 1076 0.90 18 29 0.0017 0.27 12.8 0.9 1 23 1082 1104 1082 1104 0.98 19 29 0.00014 0.021 16.2 0.3 1 23 1110 1132 1110 1132 0.98 20 29 0.00015 0.024 16.1 0.3 1 23 1138 1160 1138 1160 0.96 21 29 0.0004 0.063 14.8 0.0 1 23 1166 1188 1166 1188 0.97 22 29 6.9e-05 0.011 17.2 2.6 1 23 1194 1216 1194 1217 0.93 23 29 7.7e-05 0.012 17.0 2.4 2 23 1367 1388 1366 1388 0.97 24 29 0.00015 0.024 16.1 2.6 1 23 1394 1417 1394 1417 0.96 25 29 0.00029 0.046 15.2 1.6 1 23 1423 1445 1423 1445 0.96 26 29 1.3e-05 0.002 19.5 0.8 1 23 1451 1473 1451 1473 0.98 27 29 0.042 6.7 8.4 3.1 1 23 1479 1501 1479 1501 0.98 28 29 5e-06 0.00079 20.8 1.0 1 23 1507 1529 1507 1529 0.97 29 29 9.3e-05 0.015 16.8 2.5 1 23 1535 1558 1535 1558 0.98
Sequence Information
- Coding Sequence
- ATGGAAGAGATTCCAAGCGATGCGGAGGTTGTTATGAAAAACATCAGCACCAAAGGGATAATAATAAGGGAAGCGGAGGAGGTAATTGACAAGGGAGAAGAAATCAAAGCTACACAGTACTTCTTGGATGTTGGCGATCAAGCCGATGGAGATGAAGTTGGAGAGGCACATTTCGTTACAGTACAGGATGAACAAGATACGCAGTATGTCGCTGTGGAAGTCAGCGATTCGGGTCAGTTGATAATACCCAATAAAGAAGTCATACTGTGGAATGAGATTTGCAGAGTTTGCGCCAATGGTGGAAACAACAAAGAATTTATTCCCATATTCTCTGGGGAGGGAGTGGAACATGAATTGAGCAACAAAATTCATAGCTACTTACCTGTCAGGGTTTCTGAAAATGATACCCTTCCTCTGCAAGTGTGTTACAATTGTGCAGCAACTATGATAGCTTGGGATGAAATCTTCAAAGGTTGTATGGATGCACAACAGCGACTCTTAGAACTACAAAGTAAATTAAATTTAAAAGAGCAGTATTACAATGACTCTCCAGTTGAAGAAGAAAACATGGGAACAGTATTAGAAGTTGAAACTGCTAATCAAGAGGAACCTCAGGAGGGAGCCAAAGATGTCGAGACTTTCGAAACATTGCAGATTGTTGAGCCTAACAGGTGCAGAAGTTCACAGACACCAGACAAATCAGACAAATCAGTATTGCATAAGACAGTAAAGAAAAAACTTGTCAATAAAAAGATATCACTAAAGTTATTTAACACTGAAAGTGAATATTTGACTTTGGTACAAGAACCAGAAAATCTTGAAAAGGAAATGTTGGATGAACCTGTTAACAAAACAGATTCTCTATTCGCCGAAAAGAAGCATACAATACCTAAAGAATTTACTGCGAAAGAATCAAATAAAAGCCACGATGTTGAGAAAATCGTAGATTTGCCTAAAAAGGATATGACAGCAAATCCTCTAGCAATCGGAGGATCCGAAATCGTTAAAGACGAACGCGAAATGGAGCTATCAGAGTGTACCAGGTCTCCCGACGATTACGTGGAACACAGCTCAGGAAGCTCCGATGACGAAGAATCCGAGAAAGCATGCTCGGAAATGGACGAAACACTCGAGAGTAAGAAACGAAAACCAGCGCTGTTCACTTGTGACGATTGCGGCCGGATCTTCAAGTTCAAGGGCACTTACTCCCGACACCGGCGCATCCACTCGGACGAGCGTCCGTTCACCTGCCACGTTTGCGGAAAGTGTTTCCGCGACTCAGGCGGACTGTGCCGACACCTTCGAGACGTTCACGCGAAAGTGAAAAATTGGCCGTGCAGCATTTGCGGCCAGAGCTTCGCGTCCAAGTCGACGCGCGACGATCACGAGCGCATTCACACGGGTGAACGGCCCTACATCTGCGACAATTGCGGCAAGAGCTTCAAGACCAAGGCCTCGCTCTACATTCACGCCAAGATCCACACGGATCTGTTTCCTTACCCTTGCGTGCAGTGCAAGAAGAGCTTCCGAAGGAGGCAGGAGCTACTGGCGCACGTGACGACGCACACGGGCGAGAAGAATTTCGAGTGCGACGTCTGCTGCAAGAGCTTCAGAATAAAAGTCGAGCTGAGGAGACACGCTCTCAGTCACTCGGACGTCAAACCGTTCGCCTGCGAGCTCTGCAGCTTCAGATGCAAGCAGAGGCGTTACCTCAACAATCACGTGAAGCAAAAGCACAGTTTGATCGAGAAGACGCAGCCGAGCAAAGCAGCGAACACATGCGTGAAATTCGAAGACGGCGGGGTCATCACCATCCTCACGGCCGAGCCAGCGACGATACCCATCTTAACAAGGGATCTGGACGATGCGGCGATTATGACACCTCGCAAGCGCAAACGCAGCGTCAAGAAGGATTGCTCATTGGACCCTTTACTCGATCCCTTGTCCGACGCCCCGAAGAAAAGCAAGTCCTCCAGCCGTACCGGCCAACGTCGGCAGGAGATCCTGCGAGCCAAGGTAATCGTTGACGGCACCACCTACTACAAGTGCGCCGACTGCCCGAAGCTTCTCTCGACTCCTTACAATTACATAGCGCACAAGCGCGTGCACACGCACGAGCGCCCGTGCACCTGCCGGATCTGCGGCAAGAGCTTCACCGCGGGATCCTCGTTGAATCGCCACGTGCGCGACGTTCATCAGAAGATCAAGGACTACAAGTGCGACTACTGCGAGCGTAGGCTCGCCTCGAAGGTCGCCCGCGACGAGCACCAGCGCACTCACACGGACGAGCGGCCCCACATTTGCGAGACCTGCGGCAAAAGTTTCCGGCAGCGGGCGTCCCTGTCCGTCCACAAGAGATTCCACTCCAAGAGCTTCCTCTTCAACTGCACGCTCTGCGAGAGAGGCTTCCCGAGGAAACAGGACATGGAGAGGCACGAGCTCACGCACACCGACCAGAAGCCCTACGGCTGCAAGCTCTGCGACAAAACGTTCAGAAGCTCGGCCTCGGCCATCAGGCATCGATCGACTCATGAAAATGACAATAAACACATTTGCGACGGCATTCCCGATATCTTTTATTGCAGACGGGCCAACAGCAAAGGAAAAAGAGAATCCAGCTCGAAAACAAAGCAGTCGAAGCCTCTACCTAGTCCACGCCGAGTCAAGCAGCTGTCCGCACCTACAGAATCCGTCGAAAAGCTGGGACATGTCGATCCTCAGAAATCCATCGACTCTGTGGAATGCGTCGAGCCGTTTGAATCCGTTAATCCGCTTAAATTAGACGATCCACAGAAACAAGTTGAGCAAAGCAGCGGGGACTACGTATACGTCTGCGGAGTGTGCGAAGAGTCCTTCAAAGACGAAGCGGAACTCATGTGCCACATGCGCGAGATTCACGAAGAGAGCAAGACTGGCGCCAGTTCCGTCTGCTACGAGTGCACAATCTGTTATCGCTCGTACGCGCACAAGCTCAGTCTGATCAAGCATCTGGCCATCCATAAAAATACTGCTCACTTACCCGGCGAGATCAAGCGCCTCTCCGAATCGAAGATTCACCTAAAACGATGCATGTACCAATGTGATATTTGCAACAAGATTCTGTCGAACCGGAAAACGCTGCTGCGCCACATTCGCGTTCACAACAACGAGCGACCCATCATCTGCAACGAATGCGGCAAGTCCTACCGCGTCGAAGAGGATTTGAAGCGACACCAAGACGACGTTCATAGAAAGATCAAGAAGTATAGCTGCGACCTGTGCGGAAAATGCTTCGCGGCCAAGGGAACGAGAGACGCGCACAGGCGAATCCACACGGGGGAGAAGCCATTCGAATGCGAGGAATGCGGCAAGTTCTTCAGGTCGATCAACCTGCTGGGAATACACAAAAGGATTCATCGCGATTATCGGCCCTACGAGTGCAAATCCTGCGAGAAGGCCTTTCGATCGAAGCAGAAACTCGAGGCGCACGAGGCTATTCACACGGGCATCAGACCGTATCCGTGCGACGTATGCGGCAAAATGTTCGCGGCTAAAGGAGAAGCTACCCGGCATCGGTCCGTGCACTTCAGCGACAGGCCCTTTCTCTGCTCGGAATGCGGCCAGGCATTCAGACTGAATAGATATCTTAAGACGCATATCAAGACGCACCACAGGGATAAAGTTGATATTTTGCTCAAGTCCTTGACGGAATCTAAGGAACTTCAGCAAACTTCCTCCTGCAGCTTCAAAGAATTTCAAAGGTCCTTCAAAGCCACCTTTCCATCCTCTAAAATTAGGAAAAAGTCTCAATCAGCATCGAAGCCAGTGAAGAAACGAACAAGTCGGAAAATCAATAAGAAATCAACGAAAAGTACCTCAAAGATTAAAGCGGAATCGGAAAATCAGTGCACGACTTCAATTAAAGAAGACGAGTATCCGGAAAACTCTAAAGACTCAATTTTCGTGGACGGCCTCGTCGAGTCCCCGCATTCCGACGGGGTTAACGACCACGACGCCGACGATCCGGACTTTGAGCTGACGAGCGCTTCGTCGAACAAGACAAAAAGATCACGACGCAAGCTTAGCTCTGAAAACTCGAATGCGGCAAACGCAAATCTCGAGTGCACTCAATGCAACAAAAAATTCCGAATGTACAATAGCTACCAGATCCACATGAGGACGCATACGGGAGAGAAACCGTACACCTGCCATATCTGTGGCAAGCAATTCGGTCAAGCGGGTAGTTTGTATTATCATTTGAAGCACGTCCACGGGGGCGTGAAAAATCATGCCTGCGACATTTGCGGCCGATGTTTCGCCATGAAAACAGCCATGGAGGATCACCGGAGGATTCACACGGGCGAGCGGCCCTACGTCTGTGACTCTTGCGGCAAAACGTTTAAAACTAAAGCTTCGCTTTATATTCACAGTAAAATACACACGAACGAGTATCCATTCAAATGTAGCTACTGTAAGAAGCTTTTCCGATGGAAGCAGCAGATGATCAGTCATTTGACGACGCACACCGGGGAAAAGAATCACATTTGCGATATATGCGGAAAAGGCTTTGGAGTGAAGAACGAGCTGACGAGGCATCGGAGGACTCACTCGTTGGACAAGCCATTTACTTGCCAGAAGTGCGGTGTTAGCTTCGGACAGAAGCGATACCTGACTAATCACAATCGAACGCGGCACAAGACGAAGGCCGGCGACGGTAATTGTAATGTGTAG
- Protein Sequence
- MEEIPSDAEVVMKNISTKGIIIREAEEVIDKGEEIKATQYFLDVGDQADGDEVGEAHFVTVQDEQDTQYVAVEVSDSGQLIIPNKEVILWNEICRVCANGGNNKEFIPIFSGEGVEHELSNKIHSYLPVRVSENDTLPLQVCYNCAATMIAWDEIFKGCMDAQQRLLELQSKLNLKEQYYNDSPVEEENMGTVLEVETANQEEPQEGAKDVETFETLQIVEPNRCRSSQTPDKSDKSVLHKTVKKKLVNKKISLKLFNTESEYLTLVQEPENLEKEMLDEPVNKTDSLFAEKKHTIPKEFTAKESNKSHDVEKIVDLPKKDMTANPLAIGGSEIVKDEREMELSECTRSPDDYVEHSSGSSDDEESEKACSEMDETLESKKRKPALFTCDDCGRIFKFKGTYSRHRRIHSDERPFTCHVCGKCFRDSGGLCRHLRDVHAKVKNWPCSICGQSFASKSTRDDHERIHTGERPYICDNCGKSFKTKASLYIHAKIHTDLFPYPCVQCKKSFRRRQELLAHVTTHTGEKNFECDVCCKSFRIKVELRRHALSHSDVKPFACELCSFRCKQRRYLNNHVKQKHSLIEKTQPSKAANTCVKFEDGGVITILTAEPATIPILTRDLDDAAIMTPRKRKRSVKKDCSLDPLLDPLSDAPKKSKSSSRTGQRRQEILRAKVIVDGTTYYKCADCPKLLSTPYNYIAHKRVHTHERPCTCRICGKSFTAGSSLNRHVRDVHQKIKDYKCDYCERRLASKVARDEHQRTHTDERPHICETCGKSFRQRASLSVHKRFHSKSFLFNCTLCERGFPRKQDMERHELTHTDQKPYGCKLCDKTFRSSASAIRHRSTHENDNKHICDGIPDIFYCRRANSKGKRESSSKTKQSKPLPSPRRVKQLSAPTESVEKLGHVDPQKSIDSVECVEPFESVNPLKLDDPQKQVEQSSGDYVYVCGVCEESFKDEAELMCHMREIHEESKTGASSVCYECTICYRSYAHKLSLIKHLAIHKNTAHLPGEIKRLSESKIHLKRCMYQCDICNKILSNRKTLLRHIRVHNNERPIICNECGKSYRVEEDLKRHQDDVHRKIKKYSCDLCGKCFAAKGTRDAHRRIHTGEKPFECEECGKFFRSINLLGIHKRIHRDYRPYECKSCEKAFRSKQKLEAHEAIHTGIRPYPCDVCGKMFAAKGEATRHRSVHFSDRPFLCSECGQAFRLNRYLKTHIKTHHRDKVDILLKSLTESKELQQTSSCSFKEFQRSFKATFPSSKIRKKSQSASKPVKKRTSRKINKKSTKSTSKIKAESENQCTTSIKEDEYPENSKDSIFVDGLVESPHSDGVNDHDADDPDFELTSASSNKTKRSRRKLSSENSNAANANLECTQCNKKFRMYNSYQIHMRTHTGEKPYTCHICGKQFGQAGSLYYHLKHVHGGVKNHACDICGRCFAMKTAMEDHRRIHTGERPYVCDSCGKTFKTKASLYIHSKIHTNEYPFKCSYCKKLFRWKQQMISHLTTHTGEKNHICDICGKGFGVKNELTRHRRTHSLDKPFTCQKCGVSFGQKRYLTNHNRTRHKTKAGDGNCNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -