Ptri035539.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- -
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000497.1:111808-113795[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-10 3e-07 31.1 0.0 3 35 19 51 17 55 0.90 2 2 5.7 9.7e+03 -2.6 0.0 28 38 238 248 238 250 0.89
Sequence Information
- Coding Sequence
- ATGGGTAAACCGAAGAAAAGTATAATCAAGAAGTATCAACGTAAATATTCCTCAGAAGATATTTACAATGCAATTGATGCTGTCGAGAAAGGATTGTCTGTGCACCAAGCTGCTCGTGATTTTAAAGTACCAAGGAGTACTTTATACAATAAGATTAATCATTTAGTGCCAATAGAAGCCAAGAAAGGGCCAGCAACCTACTTGACCTACGAAGAAGAAAATTCTTTAGTTCAGTGGGTGTTGTTTTGTGGTGACAGAGGTTTTCTTGTTACAAAATCTATTTTCTTAGACAAAGTTCAGAAGCTCGTACAGACATTGGGAAGAGAGACTCCATTTAAAGAAAATAGGCCTGGTAGGTATTGGTGGGAAAGTTTTTTCAAAAGTCACCTAAAGTTAGCTGAAAGAGTGGCTCAAAATTTGACTTTCAGTCGTGTTTCAGCAACTACAGAAGATTTAAAAAATTGGTTTTCTAAAGTGGAAAGTTATTTAGAAGTAAATAATTTATTAGATACTGACTCGTCGAGGATATTCAATTTAGATGAGAGTGTATTCTTTTTGTGCCCTAAAGGTGATCGAGTGTTGGCTCGTAAAGGAAGTGCAGCGGTTTACAAAGTTGTCTCTGGAAACGAGAAGGAAAGTATTACAGTGTTATTTACTATAAGTGCAAATAGTACCATGTTACCACCATTCCTGCTGTTTTGGCGTGAGCGCATCCCAGCCAATGTTCTTGAAGAATTTAAGCAAGCTGTTGAAAACAAGACATTTAGAATATCTAACAGTGAAAACAAAGGATTGTTTGAGTTTTGGCTTCAAATGAAGCCTTATGAAGCTTTATCTGAAGACAATATTAGCATTAATTTAGAAGAGTTTAGAAAAGAAGTAATAGAACCTGTATTCGAAGCTTCATTGGAAGATATTGCTCTTGTAAGTACTCAATCAGATTCACAGATGGTAAATGTAATACTCGGTGAGCATGAGAACATTCCTATCATTATTGTACCAGTTGACAAAAGTGGCAATAATCTTCCAGAAGATGCCATAGTAGATCTTAGTCAGGATGTCGAGTTCAACCAAATTTCTATAGATGAAATAATTGAAAAGGAAAGTGTCAATGTAGTTGCTGAATCTGCTACTGAATCGAGGGCCAAACTTGATGATTTACTAGAGAATGAAGTGTTACAGTTAATAAATAGCAATACTTCTTATGCAGAAGTTCTTTCAAATGATAATCTTTTATGTGAATAA
- Protein Sequence
- MGKPKKSIIKKYQRKYSSEDIYNAIDAVEKGLSVHQAARDFKVPRSTLYNKINHLVPIEAKKGPATYLTYEEENSLVQWVLFCGDRGFLVTKSIFLDKVQKLVQTLGRETPFKENRPGRYWWESFFKSHLKLAERVAQNLTFSRVSATTEDLKNWFSKVESYLEVNNLLDTDSSRIFNLDESVFFLCPKGDRVLARKGSAAVYKVVSGNEKESITVLFTISANSTMLPPFLLFWRERIPANVLEEFKQAVENKTFRISNSENKGLFEFWLQMKPYEALSEDNISINLEEFRKEVIEPVFEASLEDIALVSTQSDSQMVNVILGEHENIPIIIVPVDKSGNNLPEDAIVDLSQDVEFNQISIDEIIEKESVNVVAESATESRAKLDDLLENEVLQLINSNTSYAEVLSNDNLLCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -