Ptri008836.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- -
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000161.1:32534-34012[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-11 1.4e-07 32.2 0.0 3 34 48 78 46 81 0.94 2 2 7 1.2e+04 -2.9 0.0 18 29 226 237 223 238 0.80
Sequence Information
- Coding Sequence
- ATGGCAAAAAAAAAGGAACCGTGTGAAAGACAATTAAAAAAGACTGCTAAAGAAAGTGGTAAATATAAGAAGACACGAAAGACAACACCTGTCAAATCTGGATCAATAACAAAAAAGAGAATAGAGAAAACTTACACACTTGAAAACCTGCAAGCTGCTTTGAATGCTCTAGGGAAAGGAATGACAATTCGGCAAGCTTCAGTTAGCTATGGTATACCTAAGAGCACCCTCAAAGTCAATATTTCACCAGCTGATGAACCATGTGCAGATGATGATTTGATCGAGGAAATAAGTGTTGCACATCCAGAAGCTGATGAAAATACTTCTAATAGTTTGGATGATTTCTCCGTTACAGAGGAAATAAATGAAAACTCATTAGATATGAGTAATGCAATTATTTCAAGCGAAGAAAGCATGCTACCACGTGTTTTGTTACCAGAGGCTGAATTGGAGCTGTACGATGAAGCAGGAAATCGTATACAAGGCAGAATCATTACAGTATCTTGTGATGATATTGCCACAGTACAACAGTTTTTCAACGTAACTGCTTCTTCAACGAACACAACTTCAGTCGAACAAATAATGGATGTCCAAGTAGAAGGTGTATCTGATAGTGTCCAAACAATTGATAGTACAATTGACAGTGGAGTTGTATCGCAGGATAATAGTAATATCTCACATGAAGAGCTTAGCAGTGAGTATAATATTTCAGATGAAGTTGAAGGTTTGGATTTAATAAAAACATCTGAAGATACCAACTCTTCTCAAAATGCAATTAAAGAAAAATCTCAATCTATGTTAAGTAATTATAATGAAGAAAGTTCTTGTGACAGCTTTAAAAAAAATAATTTAGGATTGGAAGGTATTTTAACGGAAAATATGTCTACAAATATCGTTCAAATTGATAAGCACAGCCACTTAAACATCAATGAGGAATCTAATTCTATTTTCCGGCAAAAAAAAAAGAAGAACACAGGTATGCCTTGTGTCGCTGTTGTTGATGACCTTTTGGTCGAACTAGAAAAGAAGGAGGCCGAGAAAAAACAAAAAGAACAACAAATTCAGCAGAACAAACAAGAAAGAGAGAAAGCTAAAACAATAAGAGATAAAGAAAGTAATGTTCTAAAGCTTTATAATGAAAGTAAAAAAAAACAATTACAATGTAAAAAAGACATAAAGTCACAAATTCGGACTTTAAAAATGTCCATGAAATCTGAGCAGGGAAAAGAAAACATGAAGCCCTTAAAAGAGCAGCTCCAATCACTAAATAATCAACTAACCGAATTAGAAAATTCAATTGTAATTGAAGAAATGAAATTTTTAGAGACGAAAATTAAAATTAAGCAAGAAAAATTGTAA
- Protein Sequence
- MAKKKEPCERQLKKTAKESGKYKKTRKTTPVKSGSITKKRIEKTYTLENLQAALNALGKGMTIRQASVSYGIPKSTLKVNISPADEPCADDDLIEEISVAHPEADENTSNSLDDFSVTEEINENSLDMSNAIISSEESMLPRVLLPEAELELYDEAGNRIQGRIITVSCDDIATVQQFFNVTASSTNTTSVEQIMDVQVEGVSDSVQTIDSTIDSGVVSQDNSNISHEELSSEYNISDEVEGLDLIKTSEDTNSSQNAIKEKSQSMLSNYNEESSCDSFKKNNLGLEGILTENMSTNIVQIDKHSHLNINEESNSIFRQKKKKNTGMPCVAVVDDLLVELEKKEAEKKQKEQQIQQNKQEREKAKTIRDKESNVLKLYNESKKKQLQCKKDIKSQIRTLKMSMKSEQGKENMKPLKEQLQSLNNQLTELENSIVIEEMKFLETKIKIKQEKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -