Ptri021784.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- bab1
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000007.1:4071004-4072637[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-12 6e-09 36.5 0.0 1 38 318 356 318 360 0.93
Sequence Information
- Coding Sequence
- ATGAGCTCAGCACAGCAGTACTGCCTGCGTTGGAACAACCACAGCTCCAATTTCATAACTGTGTTTGATCAGCTGCTCAGAACTGAATCTTTTACGGATGTCACTGTGGCTGTGCACGATGGCCAAGCTATCAAGTGTCATAAGATGGTGCTTGCAGCATGTTCGTCCTACTTCCAGGACCTATTCATCAAGAACCCATGCGAGCATCCCATCATCATTCTCAGCGAGGTCAGGTACATTGAGATCAAGGCCATCCTCGACTACATGTACAGGGGTGAGGTGAATGTGGCCCAAGATCAGCTTGCTGGACTTCTGAAAGTTGCTTCCTTCCTGAAGGTCAAAGGACTAGTGGAAGATCCAGAGAACCACAAGGAGGAGAGAGAAACCGAAATGTCACCCCCTCCAACCAACAGCACCAGCACACCTAGCAGCCAAACGCACAGCGGGTACGTCTCGCCGACGCACATTCCCTCCTCAACCTACATCCCTTATGGCAAGTCGCCTGTTGAAAGAAACCACAACCACATACCCCTCTGGACAGCCTTGACAGCTGCCCTACCTCTACCCCAGCATCCGATCTCTGGACCACCACCCCGAAGCCAACACTCAATTCTTGGCACCTCCTATGACAGCCCAGCCAGCGAGTTGTCGCCTCTTGGTCGGAAAAAGCTCTCCGCCCTGATGGCAAGAGACACGCCGATACTGAGAAACGTCCTAGGTCAAGCTCAAGTCGACAACGTCATGGTTGAAAGGCAGGATGCGTCTCTCTGCTCGAACAGCAATGGATCCCTCCACGACTCGGACAGGAGGAACAGCGCTGACCTTTCCGAATCCATGATGGAGGATGAGGACAGCAAGTACTCACCCCCCTACGCGAACGTCAATGGCACCAGCAAATCATCGAATAAATCATCTACCGCTAAGCCTGAATGGAAGCGCTACAAACAGTACACTCGCGAGCACATTCAGGACGCCATGGATGCAGTGAGGAATAAAGAAATGAGCGCACTCCAGGCGGCTCGCAGATACGGCGTGCCCTCGCGAACACTCTACGACAAGCTAAAGAAGGCCGGCATTCTGCCCTCTAGAGGTCTCGGAATCTCCCGTCAACGCGATACTACCAGCATCACCGACAACGGCAGCGCCCGATTCCCTTACTCCAGCGGCGTCAACGACAGTGTCTACGGCAGCAGCGCTCTATCCGAGAGCGAGGGCGAGAGCAAAGGTCTGCACAACGGAGCTCTCGTGATGGATATGTCGACGCGCAGCCCAAGCCCCAACCGAGCCGCCAGTCTCTTCGTCTCGCCCGTCGTCATGGACCAGGACGACCAGGTCGAGGATCTCTCCGTCGGCAAGAGCAACAGTAACAATGCCACGCCGGTCATCGTGCCACCGCCCTCGACGTTAACCACTCCGGTCAAGCAGGAGCAGCACCAGGAGGCCAGGGAGGAGATGGTTTGA
- Protein Sequence
- MSSAQQYCLRWNNHSSNFITVFDQLLRTESFTDVTVAVHDGQAIKCHKMVLAACSSYFQDLFIKNPCEHPIIILSEVRYIEIKAILDYMYRGEVNVAQDQLAGLLKVASFLKVKGLVEDPENHKEERETEMSPPPTNSTSTPSSQTHSGYVSPTHIPSSTYIPYGKSPVERNHNHIPLWTALTAALPLPQHPISGPPPRSQHSILGTSYDSPASELSPLGRKKLSALMARDTPILRNVLGQAQVDNVMVERQDASLCSNSNGSLHDSDRRNSADLSESMMEDEDSKYSPPYANVNGTSKSSNKSSTAKPEWKRYKQYTREHIQDAMDAVRNKEMSALQAARRYGVPSRTLYDKLKKAGILPSRGLGISRQRDTTSITDNGSARFPYSSGVNDSVYGSSALSESEGESKGLHNGALVMDMSTRSPSPNRAASLFVSPVVMDQDDQVEDLSVGKSNSNNATPVIVPPPSTLTTPVKQEQHQEAREEMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01190506;
- 90% Identity
- iTF_01190506;
- 80% Identity
- iTF_01190506;