Ptri023687.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- bab1
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000001.1:20458079-20459787[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 2.9e-14 53.5 0.0 1 43 28 71 28 73 0.95 2 2 1.7 2.9e+03 -0.9 0.5 6 15 152 161 148 164 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAATCAGAGCCTGGTGCACAACCTGCGCTTTCGGGAGCGCGGGCCCCTCAAATCCTGGCGTCCCGAGACGATGGCGGAAGCGATATTCAGCGTGCTCAAGGAGGGCCTGTCGCTGAGTCAGGCTGCAAGGAAATACGATATTCCCTACCCGACGTTTGTACTTTACGCGAACCGAGTTCATAATATGCTCGGGCCAAGCGCCGACGGTGGAGCTGGTAAGTACCTGCGGCCGAAGGGGCGAGGGAGACCGCAGAGGATCCTGCTCGGCGTCTGGCCGGACGAGCACATCCGCGGCGTGATTCGCGCGGTGGTCTTCCGCGACGGGCACTCGCCTCACATTGTCAAGGAGGAGCCGGCCACGATGTATCCCGCCTTGGCGAATTACGGCGCCTGCAACGGACCCGAGGGAGCAGTCAGCCCCAGCGCGGCTGCCGCCGCGGTCGCCGCCGTCGCTCAAGGTCTCCGGCATCAAATGTGCAGCATGGTGGCGGCGGCCCACTCGCAGCAGCACGACATGCTCGCCACCAATCTCTCCACCAACCTCTCCTCCAGCCTCTCCTCCAACCTCCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCCGCTGAACCTCGGGCTGGCGAGCCCCGGCTCGGCCGGGCCGCCCGAGAGCCCGCTCGAGTCGCCGCTGGCCAGTCCCCTGGGCTCGCTCATGGACCCGTCGCACCTGCCGCCGAGCGTCGAGGTCGGCATCGGCGTCAGCGGCATGACCTACAAGCCCGCGCGCAGCTTCGTCAGCCCCCGGCCGGAGAACCTCTTCCAGGAGGACATCTCCGACCTGGTCAAAAGCTCGCACGCCGCCCTCAAGGAGAAGGAGAAGATCGCCGTCAAACTCGAGCCGCTGTCCGACTCGCGCTGTGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGKYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPATMYPALANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTNLSSSLSSNLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLNLGLASPGSAGPPESPLESPLASPLGSLMDPSHLPPSVEVGIGVSGMTYKPARSFVSPRPENLFQEDISDLVKSSHAALKEKEKIAVKLEPLSDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -