Basic Information

Gene Symbol
ct
Assembly
GCA_018906965.1
Location
JACCIB010000012.1:1278633-1292734[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.9e-28 1.1e-23 84.0 0.0 2 72 467 538 466 543 0.95
2 3 1.5e-32 2.8e-28 98.8 0.0 3 77 906 981 904 983 0.96
3 3 3.9e-30 7.3e-26 91.0 0.0 4 75 1155 1227 1153 1230 0.96

Sequence Information

Coding Sequence
ATGGAGGAGGTGTCGAGGCTGCAGATGAGCCTGCAGCGATCGCAGGAGGCCAGCGCCCAGATGGCGGCTCGATTGGAGGAGGAGCTCGAGGGTCGCCGGCAGCACATCAACCGACTCGAGGCGAAGCTCGACCGGCAGAAGGACTACGACGAGCTGAAGCGCGAAATCAGCGTGCTGAGATCGGTCGACCTGTCGCAGATACCGACCGGCGAGTCCGGGAAGAGCCTCGAGCAGGTGCTCATCGAGCGCTCCAAGGCCCTGCAGCAGGCCGAGACCCTCAAGCCGCCCAGCACGCCCGACGCACTCGGTGGACTCACGTCACCCCTGCAGCGGGCCGCGACCGCTTCGCCGCACGGTGTGAGTGGCGGCGGCGGCGGCGCGGTGATCGCGCCACCCTCGTCCTCCCTCGTGCAGTCCTCCCAGTCGTGCTCGCAACAGCCAAGTCGCTCGACCTCGACGCCCTCGTCGTCGTCCGCGGCGGCTGCGGCTGCGGCGGCGGCGGCGGCCGCCTCGACCCCGACCTCCGCGAGCTCCTCGCTCCTCTTCCCACCGCCCCTGCAAAACGTCGAGACCTTCGGCTCGTTCCTCGGCGAGGAAATCGTGGCCAACTGGAGGCGATCTCTGGAGAGGTCGATCATGAGTCAGCAGCAGCAGCAACAACAGCAACAGCAACAGCCCGCCTCGACTGCCCAGGCCTCCACGCTCGGTCTCCATCCTCAGGCCTCGTCGGCACTGCCCGCTAGTCTAAATCACCTTCCGTCGCCAACAGATCCGATCTCGAGCTCGAGCACCCCGGCCAAGTCGAGCACGCCCCTCGGCAGTAGCGCCACCTCCTCGGCCCTCGACTCCGCGGAGAAGGCGACGACGCCGGTCTCCGGGCACGAGACCCCGGCGCCGCCCACGCCCTCCTCCACCACGGCCCTCACCTCGACCCCGAGCTCCATGCAGCTCCTGCAGTCGGTCCAGGCCACCAGCCTCCAGCCGCCGCCGCCGCCTCCGCTCAGCAGCAGCAGCAACAGCAGCAACTCGGATCAGCAGTCGCCGATGAACGGGCCCCTCGCCGCCGCCATAGCCGCGGCCGCCGCCAGCGCCAGCGCCAACCCGCCGCCCAAGAGCCCCGCCGACGCCGAGTCCGCCTGCCACAACAACAACAACAACAGCCACCACCTGGCCAACAACAACAACATCGGCCCCGCCGCAACCGCCGCCGAGCTCAGCGTCCTCGACAGCTTCAAGAGCCCCTTCCGCTTCGACGAGCGCTCGCACCCCTTCCGCTTCGGCGACGAGTTCGGCGCCGCGGGCATGGCCGGCCGCCTCGGCGAGTCCCTCATACCCAAGGGCGACCCCATGGAGGCGCGGCTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCTCCCAGAATCTCGACACGCTCCACATCGCCAGGCGGGTGCGCGAGCTCCTCTCCATACACAACATTGGCCAGCGGCTCTTCGCCAAGTACGTCCTCGGACTGTCGCAGGGCACCGTCAGCGAGCTCCTCAGCAAGCCCAAGCCCTGGGACAAGCTCACGGAGAAGGGCCGCGACAGTTACCGTAAAATGCACGGCTGGGCCTGCGACGACAACGCTGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGCATGCCGCCTTTCGCGCGCGGTCCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGACATCAGCGAGGAGCGGATCGCTCACATGCTCAGCGAGTCCGGTCACCTGCAGCTCAGCCGGCAGAGCGAGGCCGACACGTCGAACGACGCCGACAGCAAGAGCCCCAGCCGGCTGAACTGCCCGAGCCCGTTCGGCAAGGACCGCAGCATGGACAGCCAGAATCGCAGGCTCAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCCAGGATCTACCAGGAGGAGCTGGCCAAGATAATGGGCCGGGATATGCGCGGACCCCGGGACTTTCCCTCCAGCGCGATGTTTCCCCACTTTTTCAGCGGGCAGAACCTCCAGGGCCAGGAGGACATCCGCATGGCACTGGACGCCTGGAAGCTGAACATCGCCCAGGGCATGCCCTACCCGCCGCAGCTGTCGAGTCTGCTGGCCCTCCAGCAGCACGCCTTCCAGCAGCACCACCTGGCGACGAACGGCGGCGCCGGCACGGGCTCCGCGGCCGTCGCGGCGGCCGCCGCCGCAGCGGCCGCCCAGGACCTCAGCATCAACAACATCCTCAGGAGCAAGATGATCAACGGCGTCTCCGAGGAGGAGAAGGAGAAGATGGAGGAGGCCATGAGGCACGCGGGCAGCGCGTTCTCCCTGGTGAAGCCGAAGCAGGAGCCGGCCGGCGCCCAGTCGACGCCCGGCGGCTCCAGCGCCAGCTCGCCCCTCGGCAACTCGATCCTGCCCCCGGCGATGACGCCCAGCGAGGAGTTCGCCGGCGCCGCCGCCGCCAGTCCCCTCCAGAGGATGGCCTCCATCACCAACAGCCTCATCAGCCAACCGTCCACGCCGACTCACCACTCGGCCAACCAGCGGCCGCTCAAGGCCGTCCTGCCCCCCATCACCCAGCAGCAGTTCGACATCTACAACAATCTCAACACCGAAGACATTGTCAAGAGGGTGAAGGAGCAGCTCTCGCAGTACTCGATCTCGCAGCGCCTGTTCGGCGAGTCCGTCCTGGGCCTGTCCCAGGGCTCGGTGTCGGATCTCCTGGCGCGGCCCAAGCCCTGGCACATGCTCACGCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGACAACGCCGTGCACAAGCTGGTCGCCAGCCAGTACAAAATCGCACCGGAAAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACACCGATGAAACCCATGCCACCGACGAAGCTCGTTCAGGAGCAATTGCAGAATGCGGCGAAAGCTCAGGCAGCCGTGCAGGCGGCTGCTCAAGCGGCAGCGGCCGCCCAGCACCAGCAGGAGAGCCAATTGCAGCTCGGCCCGCCTCAGCAGAGCCCGCAGCATCCAGCGCATTCGCAGCCGTCGCCGATGATGCTGACTCCGCCTGGACCTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGCCGCACCATCAGATGACTCCGTCGCCTCTGCGCGCCCTCCACTCCCACGTCTCGCCCAGCGTCTACGAACTGGCGGCCCTCACTCCCGACATGGACACGCAGACGATCACGACGAAGATCAAGGAGGCTCTGCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTCCTCGGCCTGTCGCAGGGCTCCGTGAGCGAGCTCCTCAGCAAGCCCAAGCCCTGGCCCATGCTCAGCATCAAGGGGCGCGAGCCCTTCATCCGCATGCAGCTCTGGCTGTCCGATCCGCACAACGTCGACAAGCTTCAGTCCCTGAAGAACGAGCGGCGCGAGGCCAACAAGAGGCGGCGCAGCATCGGACCCGGACACGACAACAGCTCCGACACCTCGAGCAACGACACCGCCGAGTTCTACCACGCGGCCTCGCCCGGCCCCGGACCCGGACCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAGGAGCAGAAGGAGGCCCTGCGGCTGGCCTTCGCGCTCGATCCCTACCCCAACGTCGCCACGATCGAGTTCCTCGCGAACGAGCTCGCCCTCTCCTCGCGGACCATCACCAACTGGTTCCACAATCACCGCATGAGACTGAAGCAGCAGCCGCCCCACGGACAGCCGGAGCCCCAGGCGGCCCGCGAACCCGCGCAGCCCTTCGACCCCGTGCAGTTCCGGCTGCTTCTCAACCAAAGACTGCTCGACATCCAGAAGGAGAGACTCGGCCTCGGCAACGTGCCGGCTCTCACCTACCCGCCCTACTTCAACCCGAACCTCGCCGCCCTCGTCGGCAACGCGCTCAAGGAGCAGTGCTCCGGCCTCGATCTCTCCATGGGCTCGCTGAAGCGCGAGCCCAACCAGGAGTTCGAGGACGAGGACGCCGAGGACGCGATGAGCAACCTCGGGAGCGAGGACTCCGAGGGCTCCGCGGCCAGCATAAAGCGCGAGCCGACCGAGACCCCGGCGCCGGCCAACAGCTCGACCTCGAGGTCGAACAGACGGAAGCCCGCCGCGCCCCAGTGGGTGAACCCCGAGTGGCAGGAGCCCGCGAGGACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAAACCGACGACTACGGCGTGAAGCGCGAGGCCGAGGAGACGGTGCGGGTCGAGCCGACGCCGGTCCAGGACCGCTACGAGGAGGACGCCCAGAGCGACGTGTCGTCCTCCGTTTCCGCGGCCAACGCGCCCGACCGCCAGAGCCTCTCGCCCAGTCCCAAGTCCGCGCAGAACAGCCCGGCCACCTCGCCCAGGCCGCCCTCGGCTCCGCAGCACGGGGCGCAGCAGCCCGCCGAGGACAGCCCCAAGGACGTCGTGAAGAACGAGCCCGAGGAGGCGTGGGACTACTAG
Protein Sequence
MEEVSRLQMSLQRSQEASAQMAARLEEELEGRRQHINRLEAKLDRQKDYDELKREISVLRSVDLSQIPTGESGKSLEQVLIERSKALQQAETLKPPSTPDALGGLTSPLQRAATASPHGVSGGGGGAVIAPPSSSLVQSSQSCSQQPSRSTSTPSSSSAAAAAAAAAAAASTPTSASSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQPASTAQASTLGLHPQASSALPASLNHLPSPTDPISSSSTPAKSSTPLGSSATSSALDSAEKATTPVSGHETPAPPTPSSTTALTSTPSSMQLLQSVQATSLQPPPPPPLSSSSNSSNSDQQSPMNGPLAAAIAAAAASASANPPPKSPADAESACHNNNNNSHHLANNNNIGPAATAAELSVLDSFKSPFRFDERSHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPPFARGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDISEERIAHMLSESGHLQLSRQSEADTSNDADSKSPSRLNCPSPFGKDRSMDSQNRRLKKYENDDIPQEKVARIYQEELAKIMGRDMRGPRDFPSSAMFPHFFSGQNLQGQEDIRMALDAWKLNIAQGMPYPPQLSSLLALQQHAFQQHHLATNGGAGTGSAAVAAAAAAAAAQDLSINNILRSKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPAGAQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAVQAAAQAAAAAQHQQESQLQLGPPQQSPQHPAHSQPSPMMLTPPGPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPHHQMTPSPLRALHSHVSPSVYELAALTPDMDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWPMLSIKGREPFIRMQLWLSDPHNVDKLQSLKNERREANKRRRSIGPGHDNSSDTSSNDTAEFYHAASPGPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELALSSRTITNWFHNHRMRLKQQPPHGQPEPQAAREPAQPFDPVQFRLLLNQRLLDIQKERLGLGNVPALTYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPNQEFEDEDAEDAMSNLGSEDSEGSAASIKREPTETPAPANSSTSRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSSVSAANAPDRQSLSPSPKSAQNSPATSPRPPSAPQHGAQQPAEDSPKDVVKNEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01190214;
90% Identity
iTF_01190214;
80% Identity
iTF_01190214;