Basic Information

Gene Symbol
osa
Assembly
GCA_018906965.1
Location
JACCIB010000091.1:146517-170726[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-25 4.3e-21 76.1 0.0 2 89 52 139 51 139 0.92

Sequence Information

Coding Sequence
ATGAGCCCTCATAAAAAGAATAAGACGGCGGGCGACCCCGGCCTACCCACAGGTCAAGAAGGGGTATACAACAGTCACGTGGCGCAGGATCCATATAGACCGAAGAAATCAGATAGTTTATCCAAATTGTACGAAATGGATGATTCAATGGAACGCCGATCTTGGCTGGACAAACTTGTAGGATTTATGGAAGAGCGAAGAACACCGATTACCAGCTGTCCTACCATCTCCAAGAACCCCCTCGATTTGTTTCGACTGTACCTATACGTCAAAGAGAGGGGGGGCTTCATGGAGGTATGCAAGGTAACCAAAAATAAAACTTGGAAAGATATTGCTGGTCTTTTGGGCATCGGAGCTAGCAGTAGTGCCGCTTACACATTACGCAAGCATTACACTAAACACCTATTAGCTTACGAATGCCATTTTGATCGTGGTGGAGTGGATCCTCAACCAATAATAAACCAAGTTGAAGCTGGTACTAAGAAAAAAGGAGCTAAAGGTACTTCATCAGTGCCTTCACCAGGGTCTTCAAATTCGCAAGATTCTTTCCCAGCAGGAGGATCTAATAATCCATCAATAGAAAACTATGGAAATTATCCAAACAATTATTCAGGCAATGCAAATACTGGTACGGCAGGAGATTACAATCCACCTCCTCCAAGACCTCCAAGTCAAAGCAGTACGACCTCTCATCAAAGTAATTATCAAAATTCAACATCATTTCAAAATTATTCGCAAGACCAATACATTCGCCCACAAGGTAGTGCCTTAAATCAACAAAACGAGTTTAATCAACCATATTCTACTCGAGCACACTATCCTCCTTACGTCACTGATATGGAGAGAAGTTACAACAGTAATAATATTGGTCAAGCAACTACTGGTACTCCAGATATATACAATAGGTATAGTACAAATCAACCCATAGGAACTTATCCTAGTGGAGTACCATCTGGAATTAGATGCACCTATTCTACAGCTTCGCAAGGTCATTCAACGACTTCCCAACAACAAACTGTTTCGTCTCAACAAACAACTTCATTAACACCGTCAACTACTGGAAATACATATTCAAGTACTCAAGATTACTATAGACAAGAGCAGGCTAATTATGGACCACCAATGGGAAGTCAAATTTATGCTAATCCCAACACAATTAACAAGACTATGCCACCACCCCCATCAGGACCTCAGCAACCACGACGACATCCAGATTTCATAAAAGAGCAACAATATTCATCGTATAATCAGCAAAGACCAGGATACACAGGTTGGCAAGCAGGAAATAACCAATATGGTGGAAATACAGCTAGGATTCAATACACTACTCAGCAATCACAATCAACATCTCAACCACAGCATCAACAACCATTACAATCCACTCCAACTGTAGTTACATCAGTATCTTCAACAAATAGTGCAAATGCAAGTCAACAATGGAATAATCAACAAAGTCCTAGGACTAATACGCAAAGTAATATCAATTCTTTATTACATGCACAATCTTCTTGGGAACATCGGTACAATCAGAATGCATCGCTGTATACAACACCAGGATCCCATCAGACACAACTTGGAATTAATCCTGTTATAAATCAACAGTCAATGACGAAACGAGAAATGACATTCCCAACTGACAGTATCGAAGCAATTACACCATTAATATACAAAAGAAGAAAGCTAACTCGTTCAGATATTGCTCCAGTCGAAGCTTGGAGAATAATGATGGCATTAAGGTCTGGTCTATTGGCAGAGAGTTGCTGGGCTCTAGATGTTTTAAATATTCTTCTGTTTGATGATTCCTCAGTTCACTATTTTGGATTAGCTCATTTACCGGGATTGCTAGACGTTTTACTGGAGCATTTTTCACGCTCACTTTCTGATATGTTTGATTTTTCTTTAATTGATGAAAGTCATTGTCTGTACGAAGATAGAATTCACGATACTGACATTGATTTAGGCGCTGTGACAAAACCTGTTGATCCTGAAGATCGTATAAAAATTTTGTCTTCTTCAAATTACACCCTTCTGTCAAGGCGTGGTAAGCCAGTTAAAATTGTACCCAGAGATGAAGATATATTTGTTTTAGATAATAGGCGGACTTGGGATTATCAAGAAAATGAAGCAGAAGTTGAGCCCTGGCAAGTTGATAGCAGTTCAATTAATTATATTGTAACATGCTTTGAATCTGAGGTTAGTAGTGTATCATTTACAAGTCAGTTGGGTACTCAAAAAGCAGCTTTTGTTCGAAAAGAATTAGATAAATTAAGTTCAAACAGTAGTGAAATCTGCTATAATTATAAAGACACAAAAGATACTTTAGAAAATGTCATTAATGACCATGAATCTGTAAATGACAAGTTAGAAAACAATGAATCTAAGCAGCAGCAAGAGAAAAAGAAAAAGTCAAAAACATTAAGTGATGTACTTTTAAGGATTAAAAAAGAACCCCTTGAAATGAACGATTTAACTCGAGAACTATCCGAGAAAAAGGCCGATGGTTCTAAAAAAGATACCGAAGAAAATGTAAAAAATAGCCATGATTTGAGTGACCAAGGTAAACCAGAATTATTACATAACGATGGTGCCTCATTATTAAAAGAACCAACCGTTTTGAATGATTCGAATCCACCAGTGTCGACATTTATTAGCAATAATACGCAGAATAAAGAAATTATTAAGACACACTACGAAACCGAAAAGAATAAAGAAAATGGTTTTGATGAAGATGAAGTTAATAAAAATAACATGAAATTGTTTTCTATCGAGGAACAAAGTCCAAAACTGAAAATTCGTGATCCGGCTGGCACTCTTAAACGACGAAGGATAAGTGATTATGAAGATGAAAGTTACTCAAGAGATGAAGCTAGTTTATATCTTGTTACTGAAACACAAGATAATTTAGCTCGCCGATGCGTATGCCTCTCGACTATTTTAAGAAATCTAACATTTATTCCTGGAAATGAACTAGAATTTGCAAAAAATGTTACTTTTCTAAGTTTACTAGGGAAGCTATTATTATTACATCATGATCATCCTGCACGGGCTCAGAAAACCCGTAATTATGACCGTGAAGAAGATGCTGATTTTGCTGATTGCTGCAGTAGCTTACAAAGCGAAAGTGAGTGGTGGTGGGATTTTTTATATCATATTCGTGAAAATGTTTTGGTAATGTCAGCTAATATTGCTGGCTACATGGATTTAAGTCAATATCCAGAAGAAATTTCACGACCAGTTTTAGATGGTTTACTGCATTGGGCAATTTGCCCTGCAGCCCACGGACAAGACCCTTTCCCTACAGTTAGCATAAATTCCTCTTTATCACCTCAAAGATTGGCTCTTGAAGCACTTTGTAAACTATGTGTTACAGAAAGTAATGTAGATCTTGTAGTAGCAACACCACCATATTCAAGACTTCAGAAATTATGTTCTGTGTTATCTCGACTTCTCTGTAGGAGTGAAGAACAAGTTTTAAGAGAATTTGGAGTCAATCTATTGCACTTCCTTTCAGCAGCAGACAGTGGGGTAGCTCGTACTATAGCATTGCAAACACCTTGTGTAGCTTTATTAGTTGCTTTTATTGAACAAGCTGAAAGCAGTGCTTTAGGCGTAGCAAACCAACATGGAATAGCAGCTTTACGCGATAATCCCGAATCCATGGGCACCAGTTTAGATATGCTACGTCGAGCAGCTGGTACACTTTTAAATCTATCTAGACATCCAGATAACAGAACATTACTATTACAACACGAATCTCGTCTTCTAGCACTTGTAATGAGTCAAATTCTGGATCAACAAGTAGCAGCAATAGTAGCTCGAGTGCTTTTTCAATGTTCCCGTGGAGCTGCGTAA
Protein Sequence
MSPHKKNKTAGDPGLPTGQEGVYNSHVAQDPYRPKKSDSLSKLYEMDDSMERRSWLDKLVGFMEERRTPITSCPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGTKKKGAKGTSSVPSPGSSNSQDSFPAGGSNNPSIENYGNYPNNYSGNANTGTAGDYNPPPPRPPSQSSTTSHQSNYQNSTSFQNYSQDQYIRPQGSALNQQNEFNQPYSTRAHYPPYVTDMERSYNSNNIGQATTGTPDIYNRYSTNQPIGTYPSGVPSGIRCTYSTASQGHSTTSQQQTVSSQQTTSLTPSTTGNTYSSTQDYYRQEQANYGPPMGSQIYANPNTINKTMPPPPSGPQQPRRHPDFIKEQQYSSYNQQRPGYTGWQAGNNQYGGNTARIQYTTQQSQSTSQPQHQQPLQSTPTVVTSVSSTNSANASQQWNNQQSPRTNTQSNINSLLHAQSSWEHRYNQNASLYTTPGSHQTQLGINPVINQQSMTKREMTFPTDSIEAITPLIYKRRKLTRSDIAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVHYFGLAHLPGLLDVLLEHFSRSLSDMFDFSLIDESHCLYEDRIHDTDIDLGAVTKPVDPEDRIKILSSSNYTLLSRRGKPVKIVPRDEDIFVLDNRRTWDYQENEAEVEPWQVDSSSINYIVTCFESEVSSVSFTSQLGTQKAAFVRKELDKLSSNSSEICYNYKDTKDTLENVINDHESVNDKLENNESKQQQEKKKKSKTLSDVLLRIKKEPLEMNDLTRELSEKKADGSKKDTEENVKNSHDLSDQGKPELLHNDGASLLKEPTVLNDSNPPVSTFISNNTQNKEIIKTHYETEKNKENGFDEDEVNKNNMKLFSIEEQSPKLKIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTILRNLTFIPGNELEFAKNVTFLSLLGKLLLLHHDHPARAQKTRNYDREEDADFADCCSSLQSESEWWWDFLYHIRENVLVMSANIAGYMDLSQYPEEISRPVLDGLLHWAICPAAHGQDPFPTVSINSSLSPQRLALEALCKLCVTESNVDLVVATPPYSRLQKLCSVLSRLLCRSEEQVLREFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAESSALGVANQHGIAALRDNPESMGTSLDMLRRAAGTLLNLSRHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-