Basic Information

Gene Symbol
Arid4b
Assembly
GCA_018906965.1
Location
JACCIB010000016.1:2634725-2642500[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-28 1.3e-24 87.4 0.2 1 89 312 399 312 399 0.95
2 2 5.9 3.2e+04 -3.6 0.1 46 69 1665 1686 1660 1695 0.65

Sequence Information

Coding Sequence
ATGTCTTGTAATGTTTTACAGGGGGACGATCCACCTTACCTGTCGGTGGGCACCGAGGTCAGTGCCAAATATAAGGGAGCCTTCTGCGAGGCTAAAATCAGGAAGGTTGTGCGCAGCGTCAAGTGTAGAGTGACTTATAAGCAGGGCTTGGGAACTGCTACAGTGACCGATGATCAGATTAAGGGAACGCTTAGAGTTGGTGCCTCTGTCGAGGCCAGGCACAATGATAAAAAGGACTTTGTTGAGGCTACTATTACTAAGATACAAGACTGCAGTCAGTACACTGTTGTGTTTGATGATGGAGATATTACTACGCTGAGGAGGACAGCATTGTGTCTCAAAAGTGGTCGTCATTTTGCTGAGAGTGAAACTTTGGATCAGTTACCTCTGACCCATCCTGAGCACTTTGGTAATCCTGTCATTGGTGGGAGACGTGGCCGAAGATCCAGACAAACACAAGATGATAGCAGTGACGATGAAGATGATACTCCAAGGGGTGGTAATGACTCAGGCTCTGCTTCAGGAGGAAAAGAGGGTTCTGAAACGGAACCTGAGATTGGGAGGGTCGTTTGTGTGGAACTCGGTGACAAAAAGAGGAAAGACAATTGGTTTCCTGGATTGGTTGTTGCCCCAACCGCGCAGGACACTGTCAGGATAAGAGTTCGTGATGACTATCTTGTGAGATCATTCAAGGATGCTAGATATTATACAGTGCCGAAAAAGGAAGCTACTGAATTCACCAAAGAATTGGTCAATAAAGTGGAAAATAGTACTTTGAAAGTTGCTGTAGAAAAAGCTTTACTATTTTTAGAGAAGAATGAATTGCCTCCTCATTGGGACAGAGATTCATTATTTGGAAACTCAGTATCAAGCGGAAATAGTGATTCAGATGCAGAACTCGACTCAGATAGTTCGGACGATGAGCCACGTGAAGAGAAAGATCACTTTGTTGCACAGTTGTATAAATTTATGGATGACCGCGGCACACCCATAAACAATTGTCCAATGATCGGCAACGAAGACATTGATCTATATAGGTTGTTTCGCGCTGTATATAAACTGGGTGGATACAATCGTGTTACTAACCAGAACCAGTGGAAACTTATTACTCGCCGATTAAGTTTTTCCATGCAAAACAATTCGTCTACGCACAATTTGGTCAAACAAGCTTATAAGAAATTTTTGCATTCCTTTGAAGATTTTTATAGGAAATTGGGTTGCACTATGGTAAATCATCCGAGAGGTAGTATGCGTAAACAGCGTCCTGGTCGCAGCTTGATTCGAGATAAAGATAGGAATACACCTATACCAACTCAAGACAAACTGCTAGTTAAGACAGAGAAAGAGGAGGAAGAAAAAGAACTGAAGAAAGTTAGCAGTGTCACCCCGGAGGAGGAAATAAAAAAGGAAAAGCGTGAAATAAAGAAAGAGACTGTGGTAAAGGAGGAGGAAATACCGGCTAAAGTCAAACGGAAAGACGAACCGGCAGAAGAAAGTGCGAGTGGCCAAGAAAGCGATGTTAATATTGAAGGAGAAGAAGAATCTTCCAGCAGCGAAAAGTCTCAGAAATCGAGTACTTCAAGACTAACTCCTTCTTCTACAGTTAGTAGTAAGTCTAAAGCTGCAGCAACTACTGTGACAGCAAAAAGCAAGGAAGAAACAGCCAAAAAGAAGTCGGCGTCAGAGAAGAAAAAGCCGGAAGCAAAGAAGCAAGAGAAAAAAGATGAGAAGACCAAGGAAGAGGATAGTACTAAGACGAGATCTAAATCTAAAGAAGATGTAGTGAAGGGCAGCAAACCGAATTCTTCTGAGGCAAGGGAAACAAGAACACCATCACGTGAATCTGACAAGAAAGCCTTTAACAAGCAGAAGAAAATGACTGACGAGGAACTGAAGAAACGAGGTAGAAAGAAGAAAGAGGTTGAAGGCGAAAAGAGCAGGGTTGCTGAAGAACGATCAGTCGATTATGCACCCAGTTATAAAGGACCTGTAGAAATTGGCGATAGACTGAAGGTTTATTATGGTCCAACCCATGAATCCAAAGTTACTTATGAAGCTAAGGTCATTGACATGGAAAAAGATGGCACAGAAGCTGTGTACTTAGTTCATTATACCGGTTGGAACACCAGATATGATGAATGGATCAAATGTTCAAGGATAGCGCAGAACTTCACGCAAGCCCAAGGCCGAGTTAAGCGTACTAAGACCACTCCACGACCGCAAACTCCGAGTGCAAACTCTTCATCCTCAAATAAGTCTTCCAAAGGCACTACAGCACCTAATGCAGGAACTGGTGCAGCATCAACAGCTAGTGCTCAAAATCGTCGACGGGCACAGAGCGACGCACCGTCAGGTAGTAGTTCATCATCTATTGTTAATAAGGATTCTCGCAAGGATGATCGCGAGGGCACACCGGCGACACGATCTCCAACTCCGTCATCACTTACCTCGTGTATTTCGCGAACTAAGAGCCCTGCTGCAACGCCAAACCACAGAACAACACGTGTGACACGTAATGCAGATTTTTCTTTGATGGTTAACGAACTTGGTAGACGTACTAGAAGAACATCGGGTCATGTGGATGCAATGGTTGCAGAGGAGTCAGAAAGTGAAGATTCAGACTCTATGGAGTCTGAAACAAGTGCGGAGCCCGAAACGACTCAAATACAACCAAGATCAAGAGTTAAGGCAGCACAGGAGAGAAACCGTAGGGAGGCCAGACGAAGAGCTGAAAGCCGCATGAAGATTGAGGAAACGAGTGATGCCGAAGCGGAAAAGGACGTTGAAGAACCTAGGCGGGGCAGGCGACTTAGAAAGACTATCGGTAAACTACAAGAAGTCAAATCAGAACCCGAATCAGATGAAGAGCAACCTAAAGGCAGGGACTTTGATCTTAATCAAATCAGATCAGAACTCAAGGGCTTTGACAAAGCAGTGAAACTTGAGATGCCTACTGTAGAGCCTCGTCAAGAGAATGAACCAGAAGAACAAACGTCAAATGCTGTAAAGTTGGAGAAAATGGAAACCGAAACTCAATCTGATAAAAAAGTAATTGCAGAGGCCGAAAAGAAGCGCGAAACACTGAAGGTCGAACAGCAAAACGTGGTATCAATCAAACGAGAACCCATTAAACTTGAAGCCAACCAATCAGAGAGTACCGAGGATATTTATGAGTTTAAAGAACCTGAACCCTTTGAATTTGAGGTGAGAAACAAGAGAGATTCTGGTGGCAGTACCGGTAGTACAGACAAGGAGAAAGAAAAAGAGAAAGATAATAAGGACAAATCAAAAAAACGTACATTTGAGGAAGACAAAAGTCCAAAGAAGCGTCAGAAAACGTTTAGTGGACCAACATGTGCAGCAAGTACACCATCGTCAGCTGTGAAAGTTGAACAGAAATCTGAGAGTAGTCCACCAGAACCGCAAAATATAGACTCCAAAAAGAAAGTCAGAAAAATATTTAAAAAGAACGAAGAAGTGGAAGAATCTAACTTTGAAGTTGATGATAGTAATACAGCTGGTACAAGGGATCTGTCGAAATTACTTCCTGCAAATTACAGTGGAGTAATGGTGTTCAAACGGAGAGAGCCAACACCAACTGCGATGCGCAATAGTGACGATTCTGCTGCAACTGCAGGTTCAGCAGCTGTAGTCGCTGAAAATTCAACTGATAGCCCGAAAAAAAGACAACCCAAAACGTTTGGCAGTGTTACTACCACTGCAAAAAGCAACGAAAGCAAGTCTGAGACTTCTGTACAAGATGGCGGTGATAGCAAGAAAAAAGTACGTAAAATATTTAATAAGCAAGCTGATGAAAATGACGAGACAGAAGAAACTACTTCAAGTAGAGATCTTGCAAAATTTTTTCAGAATTACAGCAATTCTAAAACTCCATCCCGCAAAGAAGATACGGATGAAAATTTGCCAACTGATAGTATCAATAAAGAAAAACAAAAAAAAGTTGTAGAAGAAGATGCGTCCAAAAATTTAAAGAAACGGCAAAAGACGTTCGGACCCGCAGTCAATAAAACGAGCGAAGTAAGTAATGTTGCCGAAATTACTACCGATGCGAAGAAAAAGCAAGCGATCCCACGCAACCGAGCACCAGCTACTAAGAAGACAGAAGAAACTGCTGATACTGATGAAAGCGGCAGCGACGAGATCAAGGTTCCGAGTGTATCAAGTACCACAACCAGGGACCACGTCACCAAGTATTTCTCACATTATTCTGGACCTAAGACGAAAGCAGCCGCAATCGCTAACGAAAATGATAGTGCACAAGATCGCCCAGCTATTGTTTCGAAATCCGAAATCCAGACAAGAAATGAACCTTCTAAGTCGTGCCCTATCTTAATCAATACATCATTAAATCATGATAAGGACGAAGTAAAGGCGAAGACGGGCGAGTTGACAGCATCAACTTCAAGCTCTGTTGACAATAAACAAGCATCGGTAAGCAGTGATAAGAAACGTGCCCCCGATTCCGTTGTACTGGGTAAGACTGAGACTAAGGAGCAGCCGAAGACATTGGATTTTACACCGATTGTTCCCCACACGCTACCTGTACCCGCGCCTATTAGCACTCGTTTGCCAGCTACAGCTAGTATTGAGGAAAAGCTTTCGGCCGCAGCGGTTTTCCGCAGCAAACTTAAGGACACGAAAAAGGACGATGAATTAGAGAATACGTCCAGAAAAATTTTAAAGGAAGTGGCTAAAAAGACCGAGACGTTATCTGCTAAAAAGGCCAAAGAAAAAGAGGAAAGTAAAATAAAATATGAACCCGATAAAAAGAAACAGCCAGTCGTAGAACCAGTTATCCCGAAAAAGGATCCCTTACAAGAAATCGAAATTCGAAAGGATCCTCTGCTCGAGGTAATAAGGAAAAAGGATGAGGAAATTGTAAAGGTCAAAAAGGAATTGGAGCCAAAAGCTCCAGTGCTCATGCCAAACACAACCGTCACTAAGACTTATGGCAATCAAAGAAAGGATACAGCAACAAAAGTTGAAGAAACTTGGAAGAAGAGTGCTGCTGCCCTGGCAGTTGCCACAACGGCAAATAACTCCAGTGAGAGTACGGCGAGTGATTTGCCGAATAGTGAATCGGCCAAAGAATATGTTGCTGTACACAAAGAAACGATAGTAAGCAAGATCAAGTCAAGCATAGACCGCGACTCGGTAGATTCAACGGACAGCAGTGATAGCGAGAGGCGACTCACCATTATTGATAGTGAGGACTTTCCTGATGAAAAATGCAATGATTCCAGTTCCGATGTTAAAAGTAAGACTGTACCGATTGCTGTCGCTACTAACCAGTTTAATACCTTAACGCAGCAACAACGAGTGAGTCCGGTCGGACCGTCCCATAGCGAGACACATCAACAAATCATAGGGGCTACTGGAGTTGTAGGTGCTATTATACAGACGAAGAATACCAAAGTCGAAGAGGACGGAGAAAACTTAAACTCGCTTCTGTGCGAAGAGGAGATACCGGGCTCGCCAACACCTGGATCTGAATCCATTGATCAAGAGCACAGGGCTAGCAGTTCGCAGAATCTCGTAAAGACTGATATGGGAAGTAAAATGGCCGTTGCATTTGTGGCAGCTCAGTTACCACTAAGTACAGTACCGTCGTCGACTCAATTGAGCAACTGTACTATGGTGACTACAATGAGTGGCGGTGTATCTGTTCCCCAGAGTACAAACAATCTTGTCACTGTATCTATGACCGTTCAACATGCCAGTTCGCCTCGCGACGAGCGCATCGGTGGATCGACACCTTCTTCTTCCGAAGATAATTCCAAGCTTAATCGAGACAGCTCCGAAGCTGAGAACGATAGCGGAGGTAAGGGTAGTGTTCCAAGCGAGGACGATGGTTTGTCGCTCCTTAATTCAGAGCATGGCGGTAACGGCGGGGCTACCTCATCATCATCTGACCGAATACCCAAACCACCGGCTAAACGTGCCATTAACGATGGCGAAAATGTTTCGCCGAAGAAGCGTAAAAAGCGGAAAGATCAGGAAGGCGGTTTATCAACTAATCAACCAAACAACAGCAATACTTCAAACAAAAGGTCAAGGCAGAGTACGCGTAATACAAGACATGGAACAGGAAGTGATAGCGACGATACAAGCGAAGGTTCCAATCAGTGTATTAATAATTTAACACAAACAAACAACAACTTGACGAGGTCCGAAGCATCACCAAATGCAGCAAGAAATATGGCAAATGGTCGAGCCTCTACGGATGTTGCCATGTATATGAAACCACCGAGTACCACCAAGTACAATTTCATCGTGGATCTTGATCCGACATTGGACGGATCGCAAAAGATAGCGATTTTACAACAGAAGATGACGGAACTACGAAAAACTTACGTATCTGTTAAAGTAGAACTCGCCGGTATTGAAAGGCGTCGTAAAAAGCTAAAACGAAGAGAGCGAGAAGCACAAAAAGCTGCAAAGGCTGAAATGCAACAGGCGTGCTCGTGA
Protein Sequence
MSCNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDKKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDDEDDTPRGGNDSGSASGGKEGSETEPEIGRVVCVELGDKKRKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGNSVSSGNSDSDAELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFSMQNNSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPIPTQDKLLVKTEKEEEEKELKKVSSVTPEEEIKKEKREIKKETVVKEEEIPAKVKRKDEPAEESASGQESDVNIEGEEESSSSEKSQKSSTSRLTPSSTVSSKSKAAATTVTAKSKEETAKKKSASEKKKPEAKKQEKKDEKTKEEDSTKTRSKSKEDVVKGSKPNSSEARETRTPSRESDKKAFNKQKKMTDEELKKRGRKKKEVEGEKSRVAEERSVDYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEAVYLVHYTGWNTRYDEWIKCSRIAQNFTQAQGRVKRTKTTPRPQTPSANSSSSNKSSKGTTAPNAGTGAASTASAQNRRRAQSDAPSGSSSSSIVNKDSRKDDREGTPATRSPTPSSLTSCISRTKSPAATPNHRTTRVTRNADFSLMVNELGRRTRRTSGHVDAMVAEESESEDSDSMESETSAEPETTQIQPRSRVKAAQERNRREARRRAESRMKIEETSDAEAEKDVEEPRRGRRLRKTIGKLQEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEMPTVEPRQENEPEEQTSNAVKLEKMETETQSDKKVIAEAEKKRETLKVEQQNVVSIKREPIKLEANQSESTEDIYEFKEPEPFEFEVRNKRDSGGSTGSTDKEKEKEKDNKDKSKKRTFEEDKSPKKRQKTFSGPTCAASTPSSAVKVEQKSESSPPEPQNIDSKKKVRKIFKKNEEVEESNFEVDDSNTAGTRDLSKLLPANYSGVMVFKRREPTPTAMRNSDDSAATAGSAAVVAENSTDSPKKRQPKTFGSVTTTAKSNESKSETSVQDGGDSKKKVRKIFNKQADENDETEETTSSRDLAKFFQNYSNSKTPSRKEDTDENLPTDSINKEKQKKVVEEDASKNLKKRQKTFGPAVNKTSEVSNVAEITTDAKKKQAIPRNRAPATKKTEETADTDESGSDEIKVPSVSSTTTRDHVTKYFSHYSGPKTKAAAIANENDSAQDRPAIVSKSEIQTRNEPSKSCPILINTSLNHDKDEVKAKTGELTASTSSSVDNKQASVSSDKKRAPDSVVLGKTETKEQPKTLDFTPIVPHTLPVPAPISTRLPATASIEEKLSAAAVFRSKLKDTKKDDELENTSRKILKEVAKKTETLSAKKAKEKEESKIKYEPDKKKQPVVEPVIPKKDPLQEIEIRKDPLLEVIRKKDEEIVKVKKELEPKAPVLMPNTTVTKTYGNQRKDTATKVEETWKKSAAALAVATTANNSSESTASDLPNSESAKEYVAVHKETIVSKIKSSIDRDSVDSTDSSDSERRLTIIDSEDFPDEKCNDSSSDVKSKTVPIAVATNQFNTLTQQQRVSPVGPSHSETHQQIIGATGVVGAIIQTKNTKVEEDGENLNSLLCEEEIPGSPTPGSESIDQEHRASSSQNLVKTDMGSKMAVAFVAAQLPLSTVPSSTQLSNCTMVTTMSGGVSVPQSTNNLVTVSMTVQHASSPRDERIGGSTPSSSEDNSKLNRDSSEAENDSGGKGSVPSEDDGLSLLNSEHGGNGGATSSSSDRIPKPPAKRAINDGENVSPKKRKKRKDQEGGLSTNQPNNSNTSNKRSRQSTRNTRHGTGSDSDDTSEGSNQCINNLTQTNNNLTRSEASPNAARNMANGRASTDVAMYMKPPSTTKYNFIVDLDPTLDGSQKIAILQQKMTELRKTYVSVKVELAGIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00143661;
90% Identity
-
80% Identity
-