Pcae079613.1
Basic Information
- Insect
- Philophylla caesio
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971545.1
- Location
- OZ020608.1:100183907-100188861[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1e+05 -8.1 6.4 15 19 166 170 165 170 0.82 2 19 0.13 6.6e+03 -0.3 0.4 4 10 201 207 200 207 0.95 3 19 5.5e-09 0.00027 23.3 15.1 1 19 215 232 215 232 0.98 4 19 1.8 8.9e+04 -4.0 2.0 6 10 258 262 257 262 0.89 5 19 4.4e-05 2.2 10.8 16.5 1 19 268 287 268 287 0.96 6 19 0.89 4.4e+04 -3.0 0.5 6 10 312 316 311 316 0.91 7 19 1.6e-08 0.00077 21.8 12.4 1 19 322 340 322 340 0.99 8 19 1.3 6.4e+04 -3.5 0.4 1 8 365 371 365 372 0.59 9 19 7.5e-08 0.0037 19.6 10.6 1 18 375 392 375 393 0.96 10 19 1.1 5.3e+04 -3.2 0.2 1 4 402 405 402 406 0.88 11 19 0.0025 1.2e+02 5.2 14.3 1 18 427 445 427 446 0.92 12 19 3.8e-08 0.0019 20.6 15.5 1 18 455 472 449 473 0.86 13 19 0.0033 1.6e+02 4.8 6.0 9 18 518 527 516 528 0.89 14 19 0.0029 1.4e+02 5.0 7.3 1 12 540 550 539 550 0.90 15 19 0.88 4.4e+04 -3.0 1.4 6 10 610 614 609 614 0.88 16 19 1.8e-06 0.09 15.2 5.8 1 12 620 631 620 631 0.97 17 19 2 9.8e+04 -4.1 0.7 5 10 646 651 646 651 0.83 18 19 0.00085 42 6.7 14.7 4 18 661 675 659 676 0.93 19 19 0.00023 12 8.4 15.5 1 16 727 741 727 747 0.92
Sequence Information
- Coding Sequence
- atgtcGAGTTTATCTGCTAAAAGCGGTAAGATGAAGGAAACCTCTAACCCTAATCAAACAAAATCTAACGGAGTGAAGCGTTTCGAAGAAGTTCATGCTAGAAATATAGCTGCTGCCAAGAAAATAGTTGAGAAATATGCTTCCAGTTCTGAAGAAGAGGAGGAGCTGAATGAAAGTAGAATTTTAGATTCTGTTTATaaacattacaaaaatgagACTggtaaatcaaaaaattctacTTTATTTGAAAATGCCTTACATTCGGGCTCAGCAACTTGCTTAATATGCATTGGTTGTGTACGCCGCGCAGATGCAATATGGACTTGCAAACATTGTCATtgttttttccatttaaattgcATACGGCGTTGGGCTAGTGATAGCATTGCGCAAATGAAAGCCAAATCAACTGGACAATTGGCTTATGAGCAGGGATATTATAATAATCTTGGAGAGTATGTCCCACCGAAGCGAAAGCGAACATTACGTTGGTGCTGTCCGCAGTGTAGACAAAACTACACGCCTGAGCAAAAGCCATCTACATACGAATGTTTTTGTGGGAAAGAAATAAATCCCAAACCCGAATTATTTCTATTACCGCATTCATGTGGAGAAATATGCGGCAAAAAACTGCAACCAGAATGTGGTCATACTTGTATGTTGCTGTGCCATCCAGGTCCATGTCCACCGTGTTCTCAATATGCAAATACTAGTTGCCTTTGTGGGAAATCTCCAAGAAAATCCGTACGTTGTGTAGATAAGGAGTGGCAATGCGAGAGAAAGTGTAAAGGATTGCTTCTTTGTGGCGAACACCAGTGTCCACAATTATGCCACAAACCAAGCCAGTGTCCTCCGTGCACAAGCACCAGCGTGCAGTCGTGTGAATGTGGAAATGAGGTGAAATCTCGGAACTGTTCTGAACTAAAATGGCATTGTAATAAGGTGTGCGGATCTAAGTATTCGTGTGGTGCCCACACTTGTAAACGCATATGTCACTGGGGACCATGTGGCGATTGCCCTCTAAGCTTACCACGTGCATGTCCATGTGGAAAAACCGAAAAAATCGTGCCGTGTACTGAATCAATTGACCCATGTGGTGATACTTGCCAAAAGCTTTTATCTTGCGGTCTACATACTTGCACGCAACGCTGTCACCGTGGAGAATGTAAtttgTGCTTGATTATAACTAAAAAGAAGTGCCGCTGTGGCTTACACGAAAAAGACCTACCTTGTTGGAAACAATTTTCATGTGAAATGAAATGCAAGCAATTGCGTGATTGTGGGAAGCACGTCTGCAATAAAAAGTGTTGTGATGGACGATCTTGTCAACAatgtgataaaatctgtggCAAGCCACTCACTTGTCAGAAACACAAGTGTCAATCAGTTTGCCATGAAGGACCTTGTTATCCCTGCAATCAGCAGTCGCAAGTGAATTGTAGATGCGGAAAAACATCGCAACGTGTGCCGTGCGGTCGTGAACGCACCGCACGTGTTATGTGCATGGAAGTGTGCCgCTTACCTTCTAAGTGTCATCATCCCAATAAACATCGTTGCCACAAAAATGACTGTCCTCCGTgtaatcaaatgtgtggattgCCAAATGTAACGACAGGATGTTCGCATAAGTGCGAAGCCAAATGCCACACAGCAGTTAAAGTCATAAAGCAAAATCAATCAAATGGAACCGCTAATATTTGGGAACCAAAAAAACagTTTGAATTCAAAGCGCTACCACACCCACCGTGTGAACAAAAAGTAACAGTTACTTGTATTGGAGGTCATGAAGTGGCTGACTGGCCTTGTTGGAATTCAAAACCATCATCTTGTCAACGCAAATGCAATAGAGAACTGCGCTGCGGCAATCACAGATGTGAGCTTGTATGTCATTCCGTACCGGATTTGCAAGACAGAAAGgaacAAGTCGGCTGCGCCAGATGCCAAGAAGGCTGCAATAAGTCCCGTCCAACAGGCTGTGTGCATGCTTGTTCGCGTCCTTGTCATCCTCCACCATGTTATCCctgtgaaaaaataattaaaaacaaatgttactGCGGACTAATCCAAGTAATATACAAATGTTCCGATTACTTCTCTGAGGAAGGCACCGAAGAGGAAATTAGTTCACGTCGAGAACGCTTAAACAGCTGTGGAAATCGTTGtctgaaaaatTTGCCTTGTGGTCATCGTTGCCACACGTCTTGCCATCCCGGAAAATGTCCAAATCCGGAGTTGTGCCGCAAGAAAGTGCGTATATTTTGTGAATGTAAACGACTGAAAATGGAAGTGGCTTGTGATAAACAACGTGCTGGACAGACATCTATGGAATGCGATGAATTCTGTATTGAGACTCGTGCCAAATTGgcagaacaacaacaacgagaGGAGGAAAAGTTACGCCAAATCGAAGAGGCTAAAAATCGCGCGGAAGTAGAACAATTCGAGAAGAAATTCAGCAAGCGCAAATACAAAGAACGCAAAGTCGTATTGGAAGAAACAAGAAGAGAAGTAAATTGGAAATTAGTTGGCATTTATGGGGGTATTATATTAGTGATTGTATTGGCCGTTGCTGTGGCATTTTATGCGGAGAATTAA
- Protein Sequence
- MSSLSAKSGKMKETSNPNQTKSNGVKRFEEVHARNIAAAKKIVEKYASSSEEEEELNESRILDSVYKHYKNETGKSKNSTLFENALHSGSATCLICIGCVRRADAIWTCKHCHCFFHLNCIRRWASDSIAQMKAKSTGQLAYEQGYYNNLGEYVPPKRKRTLRWCCPQCRQNYTPEQKPSTYECFCGKEINPKPELFLLPHSCGEICGKKLQPECGHTCMLLCHPGPCPPCSQYANTSCLCGKSPRKSVRCVDKEWQCERKCKGLLLCGEHQCPQLCHKPSQCPPCTSTSVQSCECGNEVKSRNCSELKWHCNKVCGSKYSCGAHTCKRICHWGPCGDCPLSLPRACPCGKTEKIVPCTESIDPCGDTCQKLLSCGLHTCTQRCHRGECNLCLIITKKKCRCGLHEKDLPCWKQFSCEMKCKQLRDCGKHVCNKKCCDGRSCQQCDKICGKPLTCQKHKCQSVCHEGPCYPCNQQSQVNCRCGKTSQRVPCGRERTARVMCMEVCRLPSKCHHPNKHRCHKNDCPPCNQMCGLPNVTTGCSHKCEAKCHTAVKVIKQNQSNGTANIWEPKKQFEFKALPHPPCEQKVTVTCIGGHEVADWPCWNSKPSSCQRKCNRELRCGNHRCELVCHSVPDLQDRKEQVGCARCQEGCNKSRPTGCVHACSRPCHPPPCYPCEKIIKNKCYCGLIQVIYKCSDYFSEEGTEEEISSRRERLNSCGNRCLKNLPCGHRCHTSCHPGKCPNPELCRKKVRIFCECKRLKMEVACDKQRAGQTSMECDEFCIETRAKLAEQQQREEEKLRQIEEAKNRAEVEQFEKKFSKRKYKERKVVLEETRREVNWKLVGIYGGIILVIVLAVAVAFYAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00091869;
- 90% Identity
- -
- 80% Identity
- -