Pcae027854.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philophylla caesio
Gene Symbol
ZNF541
Assembly
GCA_963971545.1
Location
OZ020604.1:164798393-164822796[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.00014 0.049 16.4 0.2 2 23 356 377 355 377 0.97
2 5 1.7e-06 0.00059 22.5 1.3 1 23 383 405 383 405 0.99
3 5 0.00013 0.047 16.5 2.6 1 23 411 435 411 436 0.95
4 5 0.00072 0.25 14.2 0.8 2 23 678 699 677 699 0.97
5 5 0.0018 0.64 13.0 0.1 1 23 1819 1843 1819 1843 0.97

Sequence Information

Coding Sequence
ATGGCACTATTCCTTTCACCCAACAACTCAAGCTCAGTGTTGCCACACGAGGACATTTTATTGGTGCAGAAAAGTATTCACTTGCCACTAACGAGTTTGTCTTCGCCGCGTGTTTTGATGTGTAGCGCTTCGGTGGGCACTGAAGGTTCCGTAACGCTACAACTGAGAGACTCTTCCGACTCCAATCAATCGCCGGCGCCGACTTCCTTAGAAAATGCCTTGACTATTGGCTATCCCGATCCAGAGATGTTGGCCGACGTATTCGGTTCACTGCAGACAGCCTCTTTCAAGAATCACAGCAGTGCGTTAGCGTTGACAtcaccaataacaacaacaacaagtcaCAATAGCAATTCCCTTAGTGTTGGCAgcagtagtagtagtagtagcagcagcagcgtcAACAACAAAACTACAACCACCAGCAACGCGAGCAGTAGTTGCAGCACGAACACTTGTAGCAACAACGCCACCACCTCCGCCACCGTCTCAGCAGCGGCACCATCTAATAAAATCACAATCAGTCGACGCAATCAAACTGTATCGACAagtacaacagcaacagcaaccaATCAAGCATCTgccaccacaacaacaacaacatcagccatttcagcagcagcagcagcagcaaccacaACAGCTATAACAACAACGAACAAGGCATCCGTACAAACTGTGTCTACAGCAACGAATACCACCAATAAAACGACCAGCAGCTACGTAAAAAACTGCCTTATACgcagcagcagctgcagcaaCACCAACAACGTCACATCGCTGGCGCAGATAATGAGCAATAGCAGCACCAGCAGCTCATCGTCGCTCTTGAATCACAGCAATACGAATAGCAACAGTAATTGCAGCAGCAATAGCAATTTTAGTTCGTCTAGCAGCAGCAACGACAGCATTGTCAGCATAAATAGCAACAACAGTGGCAGCGCTGTATTGAAGAGTGTGAGTGCTGGCAGCAGCAGTAAGAGTACCAGTGCGAGTGGTGCGACAACTGCGACGCTAAAGAAGAATCGCCCGAAATTGTCTTCACCAACACGACATGGGCCGCAACAGTGTCAGaTTTGTAGTAAAATCTTTGGAAATGCGTCAGCGTTGGCCAAGCACAAACTGACGCACAGCGACGAGCGGAAATACGTGTGCGCGATGTGTTCGAAGGCATTCAAGCGACAAGATCACTTGAATGGCCACATGATGACACATCGCAATAAGAAGCCATACGAATGCAAAGCCGAAGGTTGTGGCAAATCATACTGTGATGCACGTTCACTGCGACGTCATACCGAGAATCATCATTCGGGTATTATAACGCCCCAAAACCAAACCCTCTCACCAACCTCTGGCACACCAAACGGCCTAAGCCTTTCCCCAGCAACGGCAAGCGGCGATGCCAGTTCTCCTGACGGAGCCACTTGCATACGCACTTACATCTCCACCGGTGGTACAATAGTTGATGCAGCGACTGGTGTTGCGCTGACCGAAGAGCAAATAAAGGCCATCAATTTGCCCATTAAAACTGGTGTTACTCTTCTTTCGCCCACATCCACGTCGTCGGCATCATCTGTGGGCGGCGTATCATTACCCGCTTCTTCGCCAACAATCGCCCTAACCGAAACAAGTCTCGTCGATGCCGGCGAAGGTCTTACTCGTGAACAATTGGACTTGATAAGTAAGATCATGCAACAGACGAAGCAGACCAGCGCACAGGTGACGGTGTCGTCGCCAACTAGCGTCAATTCGTACAAAGTGGACACAAATCCGTCTTCGAGAGCGCTCGGCACTGTGAGTCCGCAACATGCGGCGAGTGGAGGAACGAGTCGTCCGCGTACATGGAATATGCAATTGTTAAATACTACCCAAAATGTATCAATCACGGTTGATGAAACCAACTCCGATGCAACATCCCGCCATATAGCAATATCGCCCAACGAAGCTAAAGAGGAGGATATTAGTCAACAATTTGTGGCATCCATCAATCCTCATCTTTTGAATATCGCCAAAATGGATCAGAAGCCGGTTGAATGCAATTTGTGTCATCGAAAGTTTAAGAACATACCAGCACTTAACGGCCATATGCGCCTGCATGGCGGCTATTTTAAAAAAGACCCCGAAACTAAAAAGACAGAAAAGAAAGAATCCAGCGGTCCACCGCTCCAAACAGCCAGTATTGGCGTGCGTGCGCTGATCGAAGAGAAAATCATCAGCAAACGCAAAGATATGAACAAGGGTGCCTTCGTAGTTCCTGCACCACCCAGTAGCGTATCCAGCACTTCCACAATCCGACGGTCGATTAGCGATCTAGAAAGTTTCCTTAGTCCCAAATCACacaacaataatggcaataGCGCCAACACAACTGGTAGTGCCAATTCGCCTAATCAGTGCTCAACCACGGCCACCGCCACGACAATGTTACCtgttgcaacaacaataaaaagttACGGTGGTGGCTCACTAGGCTTGCAACAGATTGGTTTGTCGCAGGGCATTGAGATCTTTAGCACAAAGCAACAGAAGACAATTGGTAATGCTGGCCTTGGTTTGGGCGTAGGCTTCAGTGCGGTTGTCCAGGCAAACAATTCAACGATGAATCCGTCAACGGTAAAATCAGCAGCAACGACAAATACAACGACAACAAAGGGCACATCAACCGATCCGAAAGACTCAACACTCATTGAGTTACTAAAGCGCGGCACCCGCATCGCCGTCACTGCCAAGAAGCCACTAAATAGTACAAACACACTTGCAAATATGGCAAATAGCAGCACAAATAATGGCAACGGCGGAACGCGACAGATAGTCACGAACAACAATCGCACCGTGATTATTCCGTCCGACGTGCAAGTCTTACCCACCCGGCTAGCTAAGGCGAACGCAAACGCCGCACGAACAACGCCCGGCAGCCTAGCCATGACCGATACAACGCCACTTTCGCTCACAATCTCGCAGAGTGGTGACAACAGCATGGGTGGCGATGTATATACCGTAACGTATAGCAGCGACACATCTGGCTTTTTTGATGATGCCGAGGTCTACAATGTCGCCGATACGGATATGCTATTGCAGACGGTGGATTCAATGCAGCTACTAAACGATGACTCGCAACAGCTGAAAAGCGAACATTCCGAACAGTTTGACACTGTGACTGGTGTAAGTATCGCGGAAGGCAGTCAAGCTGACAACAGCGGTAATTGCGTTCAGACCGAATTCTTAAAATTAGAAGTCGACAGTAATGTCAATACCATGCCCAACACTTTACCCACTTTCCAACAATTCCATTCCAAAGAGCTCATCATGCAGAATAGTGCCCAAATACAGGCTGTGACTAGCATGCGCTCCAATGCGCATCAACTGGGCACGATGTCCTCACCAATTAACTCACCACTCGCATACCCTACACCGCCCTCCAGTCATGAAAATATGACACAATCCTCACCGTATGTGGAGGATGGACATCAGTATTCCGAAGTGGCGAATGCTTTCTTCAATGACAAATGCAGCGCCGACTTTCTCACGCAGTCAACCGCCGGAGTGACATTCTTCAAAGGCGGCAATGACAATCAACTAGAGCTCACCGATACTGAAAAGATATTAAAGTTGAAGACTGTGCTAGAGGAGAGCGCCTTCGATGGTTCCATTAAGGTCGAAGACTTGCTAAATGGTGCGCAAGATGATGATACCGAGTGTGATTTACGCGATTTCGCCGAAACTAATCTAGCATTCTTGGACGAGGATCAAGAGTTTCTAAATGATTCACGGAACGCAACATCGCCTCTGCCGGAATCCTTTTTCACAGGAAGTATTGGCACAGCCGATGAAGTGAAGGAAGTTTTGCGTGATGTGCTACCTGACGAGAATATTAATCTCAATTGCGACGAGCAGTCCGGTGAGAACATCATTGATTTGTACTACTTGCCTGGCTTAGGACTGCAGTCACAAATGATGCCCAACTCTGATGATCCCCTGCTATCTTCGTCACCGAGGGATTTCGGGCAGCAGCGAGGTCAAGTTATACAGACGACACAGCAGGTGCAGGTTCAgcagcaactgcaacaacaacagcagcagcagctccAAAATCAACAAACATTTACACAGAATCAGCAAATTCAGCAGAGCACGCAGCAGTTGTTGTATGCGCAGCAAATAGAACATCAAATTCAACAGCATCAACAACAAGCTTCTGTTGGTGGAAGCTATGTAGGCAATCACTATAATGTTAGTGAGGGCACTGCTGCCAATACGACGCTTCAGTACAATGTCCACAATCTACCGCAAGtacaaaaccaacaacaattCATTGAAGCCAACACACCGATACAGCAAGTGTCCTCACTGGATGGTGGTATACTGCACCAACAACTTGTCTTCACAGGCTCGACAGATAAGCAGGAGATACATATAACAGGACAGCCGAGTGAAATAGGCCTGCTGTCCACAAGTGGCGCGTTAAATACTGACACAAATATTTACTTCGCCAGCAACTCCAATAATTCCAACATGTCGTCACTTCAACAGACTGGCAACCAGTCTATTACCAGCAATATTACAGCTTCCTGTCAGCCGCCAGTAGCGTCCACAGTCATTTCCACGCTACAACCCCTCTCTAACCAAACCAATTCCATCCTGAAGCGCCGGCTGCGACAGCACAATTACAGCGATACCGGCAGCTCGCAAAGTTTCGCCAAATATCATCCACTTTCACCGTACCGCTCCAAGCTACGCAAACCTTCTCGCACTCATTTCACACCTGCGCCTATTCTCAATCCCGATCGCAAAGGTATCGGATTGTATTGTAGCGTGCGCAAACAGCTCAACACAGGCATGCTTGGATTCGATAGCTTCGCCGATGATTTCGATGATCCCGTCGGATTGGTGGACTTCTCTGATGAATCAAAAGTCAATTTAGGATCGGCCTATCAAGCACAAATCCCACCCTGCCGAGAGCGCATACAAGGTGCGAGTAGCGACACTGCGACGGATGGTCCATTATGCAAGATCACGTCGTGCTTTGAAGTCGACGAGCCTATAGGCGCAGAACAATTATGGGAACCCACCGTACAAATGGACGAGAAGATTTTAATGCGATATATTGACCTGAGTAAATCGTCGGCAGTACCGTTGGGCAGCCACTCTGAGGAGGTGGCTCTGCAAACACTACTCAATGCGCACGGAAATATGGCAGCGGCGGTACTCACGCTCTTGCAAACTCAATCAAATGCATTCCAAATGAAGTGGTCCGCTACGGAGTTGGAAGTTTTCCTAAAAGGTTTGGAGCGGCACGGCAAAGATTTTGGTCGCATTTCGCTAGAGttgGGCTCGAAGACCACCGGAGAATGTGTgcaaatgtattatttttggAAGAAGCTATGCGTTGATTATAAAGTGTCGCATCTAAAGACCGAAACTCCACCGCCACCACCGGCAAACGATCCCAAGCCGTACGTATGCGAAGTGCCTGATTGTTCGGCGAGCTTCACCTCAAAAGCTGCCCTGCATGGCCATACTCGCATACATACGTATGGCAGAAATGCCAACAGccataataataacaacaacaataacaaccaccaaaacaacaacaacaacatcaacaatgCCACAGCCAACACAATCAATACGAATGGCGCCACAATTGGCAGCTCACCGACGCTCGCTCAACAGAGCAACATCAGCACGGCGCAAACACAATCGCAAGCAGCCAATGCGAACACAGGTGCCAGCGCTGTGTTGGCTAAAGATTCGAGTCAAAGTGGTGCGGCCAGCGCTGCCAGTGGTGCCAGCAAGGACACCGATTTCCCCTGCAAGGTGTGCGGCAAGTAA
Protein Sequence
MALFLSPNNSSSVLPHEDILLVQKSIHLPLTSLSSPRVLMCSASVGTEGSVTLQLRDSSDSNQSPAPTSLENALTIGYPDPEMLADVFGSLQTASFKNHSSALALTSPITTTTSHNSNSLSVGSSSSSSSSSSVNNKTTTTSNASSSCSTNTCSNNATTSATVSAAAPSNKITISRRNQTVSTSTTATATNQASATTTTTTSAISAAAAAATTTAITTTNKASVQTVSTATNTTNKTTSSYVKNCLIRSSSCSNTNNVTSLAQIMSNSSTSSSSSLLNHSNTNSNSNCSSNSNFSSSSSSNDSIVSINSNNSGSAVLKSVSAGSSSKSTSASGATTATLKKNRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYVCAMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGIITPQNQTLSPTSGTPNGLSLSPATASGDASSPDGATCIRTYISTGGTIVDAATGVALTEEQIKAINLPIKTGVTLLSPTSTSSASSVGGVSLPASSPTIALTETSLVDAGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKVDTNPSSRALGTVSPQHAASGGTSRPRTWNMQLLNTTQNVSITVDETNSDATSRHIAISPNEAKEEDISQQFVASINPHLLNIAKMDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKKTEKKESSGPPLQTASIGVRALIEEKIISKRKDMNKGAFVVPAPPSSVSSTSTIRRSISDLESFLSPKSHNNNGNSANTTGSANSPNQCSTTATATTMLPVATTIKSYGGGSLGLQQIGLSQGIEIFSTKQQKTIGNAGLGLGVGFSAVVQANNSTMNPSTVKSAATTNTTTTKGTSTDPKDSTLIELLKRGTRIAVTAKKPLNSTNTLANMANSSTNNGNGGTRQIVTNNNRTVIIPSDVQVLPTRLAKANANAARTTPGSLAMTDTTPLSLTISQSGDNSMGGDVYTVTYSSDTSGFFDDAEVYNVADTDMLLQTVDSMQLLNDDSQQLKSEHSEQFDTVTGVSIAEGSQADNSGNCVQTEFLKLEVDSNVNTMPNTLPTFQQFHSKELIMQNSAQIQAVTSMRSNAHQLGTMSSPINSPLAYPTPPSSHENMTQSSPYVEDGHQYSEVANAFFNDKCSADFLTQSTAGVTFFKGGNDNQLELTDTEKILKLKTVLEESAFDGSIKVEDLLNGAQDDDTECDLRDFAETNLAFLDEDQEFLNDSRNATSPLPESFFTGSIGTADEVKEVLRDVLPDENINLNCDEQSGENIIDLYYLPGLGLQSQMMPNSDDPLLSSSPRDFGQQRGQVIQTTQQVQVQQQLQQQQQQQLQNQQTFTQNQQIQQSTQQLLYAQQIEHQIQQHQQQASVGGSYVGNHYNVSEGTAANTTLQYNVHNLPQVQNQQQFIEANTPIQQVSSLDGGILHQQLVFTGSTDKQEIHITGQPSEIGLLSTSGALNTDTNIYFASNSNNSNMSSLQQTGNQSITSNITASCQPPVASTVISTLQPLSNQTNSILKRRLRQHNYSDTGSSQSFAKYHPLSPYRSKLRKPSRTHFTPAPILNPDRKGIGLYCSVRKQLNTGMLGFDSFADDFDDPVGLVDFSDESKVNLGSAYQAQIPPCRERIQGASSDTATDGPLCKITSCFEVDEPIGAEQLWEPTVQMDEKILMRYIDLSKSSAVPLGSHSEEVALQTLLNAHGNMAAAVLTLLQTQSNAFQMKWSATELEVFLKGLERHGKDFGRISLELGSKTTGECVQMYYFWKKLCVDYKVSHLKTETPPPPPANDPKPYVCEVPDCSASFTSKAALHGHTRIHTYGRNANSHNNNNNNNNHQNNNNNINNATANTINTNGATIGSSPTLAQQSNISTAQTQSQAANANTGASAVLAKDSSQSGAASAASGASKDTDFPCKVCGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192757;
90% Identity
iTF_01189370;
80% Identity
iTF_01189370;