Pcae029055.1
Basic Information
- Insect
- Philophylla caesio
- Gene Symbol
- -
- Assembly
- GCA_963971545.1
- Location
- OZ020604.1:183576644-183585370[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.044 15 8.6 1.2 1 23 1808 1831 1808 1831 0.98 2 13 0.56 2e+02 5.1 1.1 1 23 2024 2046 2024 2046 0.94 3 13 0.00026 0.09 15.6 2.5 2 23 2049 2070 2049 2070 0.97 4 13 2.5e-05 0.0088 18.8 0.2 3 23 2078 2098 2076 2098 0.98 5 13 4e-06 0.0014 21.3 3.7 2 23 2105 2126 2104 2126 0.97 6 13 7.6 2.7e+03 1.6 0.4 5 23 2139 2157 2137 2157 0.96 7 13 1.9 6.6e+02 3.5 5.4 3 23 2164 2185 2162 2185 0.93 8 13 0.021 7.5 9.6 0.2 2 23 2196 2216 2195 2216 0.96 9 13 0.0002 0.071 16.0 0.8 1 19 2222 2240 2222 2244 0.93 10 13 8e-06 0.0028 20.4 1.2 1 23 2252 2274 2252 2274 0.98 11 13 0.00014 0.05 16.4 7.6 1 23 2280 2302 2280 2303 0.96 12 13 0.0013 0.47 13.4 6.5 1 23 2308 2330 2308 2330 0.98 13 13 0.0024 0.83 12.6 6.0 1 23 2336 2358 2336 2359 0.96
Sequence Information
- Coding Sequence
- atggGGGAGAACGTACAGTGTCCAGTGTGCACACTGTTTCTGCACGCTGGCATGAATCTTTCGGATCATTTGGAGACCCACCCAAAGGAACAGGTGATTAAGGCGCTTGTGCAAATGACAATTACGGGCATTGGCGGTTCTGCTGCCGGTAGCGCGCTTGCGGCATCACTAAGTGCAGGTGGCGAGCCAAAATCAGATCCAGATGAAAAATCGATTCCTGCACCAACTGGTCCTGAAACAGATACGCCCAGCAAAGCGACAACGAGTAATTCGTCCTCCTTCGCATCTGCCGGTTCGTCAAATGACAATAGTCTGAACCTCACCACTGCAATAACTAAACCTACTACAGCACCTACAGCCGGCTTAAAACCAAAAGCGGCGGACGCAAAGCCATCAGCTGATATTTTGGCAATCTCAAAGGATGCTGGCGTAAACGATATTGATGAAAAGAAGTGTGATAGTGCACGTAGTACCAACGATAAATTGAAGGTTTCACCCACAAATGCAGCGATACCAAGCGTACTTGGTCCAGTGTTGTCAGGTAATTTTGATGATTATGCGGCGAATAAATACcaccaaacacaaaaaaaattagcggCAAGTCAATtagaacagcaacaacaacagaaaaaatCGAAGCCGCACGAGATAGACAATGCAACATCAAATATTGCAATTGCACAACAACGCTCGGTATTGCCACCACCGCCCCCACCAGTGGTATCAATGCCGATAATGGTTGGCCAAATGAGCAACAAATTGCTACAGCCAACACATTCAGCAACACTATTTGCTAGCAATATTGGCAGTCATCGTCAGGTTCAAATGCATTCGATCCAACAGCCTAATCAGCAACTACAGCAACAgtatcaacaacagcaacagacaCACAGtcagcaacagcaacatcagcagcagcagaacCTCAAAATATATTATTCTACAACTTTGCCGACTCCACCGCCATCGCTGCAGCTGTTCCCCTTTCACGCATCAACAcatatgcaacatcaaaaaccACCGCCGGCCTATGGCACAGCGATAAGTCAAATTCGATCTCAACATAACCAAAATAAGAATAAGCATGCTATTGGTGATAAAAATcaccaacaccaacagcaaCCGCTATCGCATCataatcatcatcatcatcatcagcagcagcagcagcagcagcaacagcagcagttaCACCAACATCATccacaacagcaacagcaacaccaGCAACAACACCATCTGCATCAGTTACCGCTTCAAATTCAACAGCGTCCAACAATGCATCCACCGCAACCACAAGCAACAACCAACGGCGCTACATCGATACAGGTACATCATCACCATCAACAGCAGACGCTTGGAACTATACCAGCGTTAGGCGTGAAATCAGCTACAGAAACTAAACCTACTGTGTTACTTCCACCGCCGCCACCACCCACATGTGCACCAACCATCCTGCATCAGCTGCAACAACACTTACCACATTCGCTGTCACATTTTGGCAATGCGATCAAATCATCGCCAGCTGTGCAGCAACGTTTGGCAAAAGATGTCACAGAACCTAGTGCAATGGTCACGGCATCAACACCGCCACAGACACTTCCCTCAGTTCCAGCTGACAGTACGGCAGCTGTGCCACCTACACCAGCAACTGGACCAGCCATAATAGCCATTGCATCAGCTGGAGGTATAAGGCAAGTGTCCTCACCATACAATTCTTTGTTGATGACAGCGGCACAGTCACCATCATCGTCGTCAGTGCTCCGCTATGCTGAATCGCCGGTAGCGCACTATTTGGAGCGAGACAATGGTGACTTTATAGTACAGGAGACACCGAAACACATTGTCGAGTGCGTTGAAAAGGACAATGGAGAGTTTTCAGTGATAGAGCGTATATATCAATCACCATTAAGTGTGTTACACATACACGAAGATAACGAGAAAGACGATGACGAAGTCGACGACGATGATGTTGATATAAAAGACAATGATGAGAAGAAGGTACTTCCAAACGATGAACAAACGAAAGCTAGTGAAACTGAACCGATGGATATTGAATGTGCTGGTAGTTCAAGAAATGTTATGACACCGCAAAttaatgtaaaagaaaattacGAAAGGACAGCTTCAAATAAGACCACTCACGCAAAGGATACAGAAACCAGTGACAGCAATGAAGGCGCTGCTAAAAGCGAAGAGAATATAGAAACAAAAATGTACGGCGGCGAGAGCTCAATAACTGCGCACTCCAACtgtggcagcaacaacagcaatataAATAGCGATATATCGACATCTGTGCCTAGTGCGGCCGTGGGCTCTGTCCACACAGACACAAGCAACGATTCCGGTTTGACGTCGAATCCAAATCCAAACATTTACACTGAATCAAATGCGTTGCCCAGCACAGTGTCAAACTCAAGTCAAAGCCCTACTTCATCGGCGGGCACATCGCGCAAGCGCAATTCTAAAAACACTATAACTGTACTGAGCGATGTACAGTTAAATTTGGATGAATACCTCGATTTGGTTGGTAATATAATAGCATCCAGTAAGATATCGGCAAAAAATAGCACATTAACGGGCACTATGCCCATACCGTTGTTGAAAGTTGAAAAAGAGGAGCCACCAGATGATGACTACGAAATGGAACATtcacagcagcagcaacaagaGTTTGAAGAACACAAGGAGGAATATTTTGATGAACACAAACATCTTAGTGAACTGCAAGCGCCAACTGTAAATGAACCACCTACAATCGCCAACAAAAATGAGACTgaaaaaatagttgaaaataattGTAGTAACAATAAGGTTAGAATAAATGTTAGTGATGATGATATAAAAGCTGTCAGTACGGCCATGTTGCAAATGCAAAACGCTAAGAGCGGCGCTGCAACCACAACAACATCAGCCGCAGCGACAGCAACAGCAACTACAACAGTAGCAAAAGCAGCAAAAGTAGCAACAGCAGCATGCTCGAGTCACGTGACCAGTGTTATACGCATGGCAACAACTAGTCAACAACAGCAGCCGCAACCAAACACGATCGCCTCGTTGGTCACAGAAACACAATCACAAAATACGTACAGCGATGTGACCTCACCGGCAAATCAAACGCAAGTAACATCAATAATTATACAAGATTTGTCTCGGCAACATATTATACAGTTGCAAGAAGAGCAACAGGCGCATAGAGAcgaacagcagcagcagcaggaggAGCAACAGTTAGCGGCTGTTCATCGCGATTCAGAGCTAAAGGCGGAAGTGCAGTCACAGCTGCACAAACAAACGCCTCCACCGACTTCACTGCCAGTGCATAAAAGGGGCCCAAAGAAGCTGATTATCAAGCCAAAATTAACAAAGACTGATGCAAATGCTAACCTCAAccacaataacaataacaaaatcaacaacaacaaaaacaacaaccataACCATAATAAGAATAGGGATGACAAAGAATTAAAACCCCAAATAATCAGCGAGGAAACTCTAAGCGAAGAACCAACCACCTCTTCCAAAGCACTAATGGAATTGCAGGAAAAAACACAGCAGCAAAAGGTATCGCCACAACACAAGGAACAGCAAATCGTTCACACAATAGcacacaaattaataaaaagtgaaCCCAACACTTCAGCCTACGATACCAATGTGAATAGAGCACTCAGCAATGCGAATAAAACGCACAGTATCCTGGAACAGCATTTAAATTCGAGTACTGATAATTGTGAGCCTACCGTTCAATGTAAGACCGAACACGAATCACAACCAAATTATTTGCAACCCTTCAAGGAGGAAATTAAAGATATCGGCAACTCTAACGATAATGCGGCAGCCAATGATGATGCCCGTGTGCTATTGGATTTCGCGAATTCAAAGAAACGCATATCATCACATACAAGCGCAACCAATTTTCTCTCAGCCACTTCGATTTTCTCAAACACCTCGAACTCAACCAATGAGTCGAAACCAGTGGCAAGTCTCACCAATACCAATACAAATAGCACTGAGTCACATGCCGCATTGCGTTGCGAAGATGAATTTATAGCGCATGATGATGTGCAAGAAATCGTCATCTCATCATCCTATTCACAATCACAATCGGCTTCAGATGTACCCACGACAGCGACCAGCAGCACAACCACATCCCAAGTCAAGGAATTACGTGCTgttcaacagcagcagcagcagcagcaacaacagcaacaccaGCAGCCACACCAgcaacaacatcagcagcagCCACACCAGCTTAATCACAACTTTGCCGATTatccatttatttttctttatggcAACGGTGGTGCACAGCAAACGGATGCCAAAGTTGGTAACTTCTCAGCCATATATCAGCAGGCGGCGCAGGACGCTACCACAGCTGCAACGCTGGCATCGGGCAGCAATACTGTCCATACAGATGAATCCACCAGTTCAACACAACAGCGACAACCGCATACGAATCATTTTGGTGGTGTGCATAGCGGTGGTGGTGATATTGGAAATAATGCTTCGCATTGGTATCACCACACAATGGCCACGGCAAATGCTGATTTTGAAGCGGCTTTGGGTGTCGATTGCAATGCTGCCGTAGATGGTGGCGATGTTGGTAAATATTTGGATCTTGATACATGCAAACGAGAAGCTTTAGTTGGCATGCCAGGCGCACCATCTTCAACCTCGTCGTCATTCGCCGCCGTCACAGACAGCAGCTTGGCTGGCGGTTGCACTACTGATGCTTTGAATATACGTACTGATGAAAAGATGCCGGCAAAGGGTGAGATTTCGGGACAAGAGAGTAATTGCGATATTGAAAACTCGTGGAGTCAGCCGATGTATGGTGAGATTTCGGCCCGCTTCTTCAAAACCACCTTCCCCGGGATATTTCAACATGAGAATGGTTGGAACCACGACGAATACTTTACCGTACAGGATTTGAGCGCTTCAGCTGCTGCGACGGGAAATACGCCCACCGCGAACCGTTCAGGCAAAAGCTTTGATTTTCGTCTTCCTTTGGAAGCAACTACCTCAGCGGCAGCAAATGGCACTGGCGCAGGCAACAGTAATTTCCAACTCTTCGCACGGCATGCAGATGCATTACCCTCCACGTCAACTTCTAACAAAAAGAAACGCAAGCGTGACAGTGCTGGCAGCAGTAGCAGTGCTATTGGTGGCAGGGTAGAAAAGACGGCAATGTCACGTATGCAGCCGACCGCTACAATAACTTCACAACAGTTATTGTTgcaccagcaacagcaacaacatctaCAGACGCACGAACAGTTGCAACAACTGCAGCATAACGACAATGCTCCAACATCTACATCACTTATGGTGAGTGGCACTCCAAACTCTGCTGGTACAGGCGCTGCCAACGCGGGTGCGGATCAGAGGCGACAACGAAAGAAAGTTTATCAGTGCGCGCATTGCACAGCTGAGTTTCCAAAGCTTAAGGATCGTAATTCACATATGATAACACAACATAATTATGTGCGTCAGAATCGACGATTGATTTGTATTCAACGTCCGGTTGCCACAGCAGCGACAACGACTGTGACTGTGACTGCGGCTGCGACTGCGGCTGCTACTTCATCAGCCAACGCAATTGCTGCTGGTGTCGACAATGTTCCGGTTGTAAATATGGCAGATGGCTACCATAGCACGCTGGTACGTTCAGATAGCCTGGAATTTTTGGAAGATTCAAAGCAGGACATAGTTAAAATCGAGATGGACAACGCGTACCAGCCATTAACAGCGGCATCTGCGGCTGCAACGTCCACATCTGGCAATGTTGAAGGTATTGACGCTAAGCCAGAACTTGTGGACGACAAGCACAGTATGGCGCTACTACCAGCAAGCAGTGCAAATACAAATGTTGGAGGTGCTATTGCCGCTCATGAACCAGTTGACAGGAAACTCGCACTACAGCCACTAGCGTTGACTACACCAGCGACCAAATTAGCCGCACTCTATCGAATGTTGGTTTCCTACAATATTTCAACACTAAAAGACAGTCACAATCTGAGCGAGATGGAACAGAAACTCATTGAACAGTCGATATTCTTTTGTTATGTTTGCCGGCGTAATTTTACATCGGTAAAATTATATGATGCACATCTGAGCGAGCATCCCGCCGAATGTTTTACTTGCGGCAAGACATTTCAGCGATGGAAGAACTTTTCACTGCATTTGAAACGCCATTTGGGCTGGAAAGAGTTCGGTTGCAATGTGTGTGACAAGAAGTTTGTGGTGCGTAGCGCATTGGTGGAACATATGCGCATGCATACCGGACATACGCCACTCAAGTGCAAAGTTTGCGGCAAATACTTCAAGCGTTATTCGAATTTGACGCAACATCGTAAGCGCCATGGCAAGCAGATCATAAGGAAGAAGGAGTATGTTTGCCATTGTGGTGAGGTGTTGCCATCGAAGGCGCGTTTCCTATGGCACAAGGAGACGCACGATGCCAAACCGAAATGTTGCCCATATTGTTGTGATCGGTTCGTGCATGCGAACTCCTTGCGCCGCCACATTCGTTTAGCGCACTCGGATAAATTCGATTATGCCGAGCCGATGGAGTGTCCGCTGTGTAAACAAACCTTTGCCAAGTCCTCCATAAAGGCGCACATGGCCACACATTCGATGGATACACAGCATGATTGTGCGATTTGCAATAAATCGTTCTCCACCAAATGGAACTTGAAAATACATTCTTGGGTACATGCCAATCGCACCGCCAAACCATTTAAATGCGAACACTGCCCCAAGGCGTTTGTACGCGAAGTCGATTTCAAGAATCACATGAACGCACACAAACAAATCAAGCCATATACGTGCGAATATTGTGGCTGCAAATTTATACGGAAATACAATTATATGCGGCATCGACGCGAGCATCACGGCAACAAGAAGTTCACCTGTGACCTGTGCAAAAAGTCCTTCCATCGGCATTATTATCTTATCGAACATCGACGCATACATACAGGCGAGCGGCCATTTCAATGTACGATTTGCGGCAAAAGTTCCACAACGAAAACCAATCACAATAAGCATTTGAAAATACATCATTCGCGCGATCCCTTCACCGTTGAAGCGTAA
- Protein Sequence
- MGENVQCPVCTLFLHAGMNLSDHLETHPKEQVIKALVQMTITGIGGSAAGSALAASLSAGGEPKSDPDEKSIPAPTGPETDTPSKATTSNSSSFASAGSSNDNSLNLTTAITKPTTAPTAGLKPKAADAKPSADILAISKDAGVNDIDEKKCDSARSTNDKLKVSPTNAAIPSVLGPVLSGNFDDYAANKYHQTQKKLAASQLEQQQQQKKSKPHEIDNATSNIAIAQQRSVLPPPPPPVVSMPIMVGQMSNKLLQPTHSATLFASNIGSHRQVQMHSIQQPNQQLQQQYQQQQQTHSQQQQHQQQQNLKIYYSTTLPTPPPSLQLFPFHASTHMQHQKPPPAYGTAISQIRSQHNQNKNKHAIGDKNHQHQQQPLSHHNHHHHHQQQQQQQQQQQLHQHHPQQQQQHQQQHHLHQLPLQIQQRPTMHPPQPQATTNGATSIQVHHHHQQQTLGTIPALGVKSATETKPTVLLPPPPPPTCAPTILHQLQQHLPHSLSHFGNAIKSSPAVQQRLAKDVTEPSAMVTASTPPQTLPSVPADSTAAVPPTPATGPAIIAIASAGGIRQVSSPYNSLLMTAAQSPSSSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPLSVLHIHEDNEKDDDEVDDDDVDIKDNDEKKVLPNDEQTKASETEPMDIECAGSSRNVMTPQINVKENYERTASNKTTHAKDTETSDSNEGAAKSEENIETKMYGGESSITAHSNCGSNNSNINSDISTSVPSAAVGSVHTDTSNDSGLTSNPNPNIYTESNALPSTVSNSSQSPTSSAGTSRKRNSKNTITVLSDVQLNLDEYLDLVGNIIASSKISAKNSTLTGTMPIPLLKVEKEEPPDDDYEMEHSQQQQQEFEEHKEEYFDEHKHLSELQAPTVNEPPTIANKNETEKIVENNCSNNKVRINVSDDDIKAVSTAMLQMQNAKSGAATTTTSAAATATATTTVAKAAKVATAACSSHVTSVIRMATTSQQQQPQPNTIASLVTETQSQNTYSDVTSPANQTQVTSIIIQDLSRQHIIQLQEEQQAHRDEQQQQQEEQQLAAVHRDSELKAEVQSQLHKQTPPPTSLPVHKRGPKKLIIKPKLTKTDANANLNHNNNNKINNNKNNNHNHNKNRDDKELKPQIISEETLSEEPTTSSKALMELQEKTQQQKVSPQHKEQQIVHTIAHKLIKSEPNTSAYDTNVNRALSNANKTHSILEQHLNSSTDNCEPTVQCKTEHESQPNYLQPFKEEIKDIGNSNDNAAANDDARVLLDFANSKKRISSHTSATNFLSATSIFSNTSNSTNESKPVASLTNTNTNSTESHAALRCEDEFIAHDDVQEIVISSSYSQSQSASDVPTTATSSTTTSQVKELRAVQQQQQQQQQQQHQQPHQQQHQQQPHQLNHNFADYPFIFLYGNGGAQQTDAKVGNFSAIYQQAAQDATTAATLASGSNTVHTDESTSSTQQRQPHTNHFGGVHSGGGDIGNNASHWYHHTMATANADFEAALGVDCNAAVDGGDVGKYLDLDTCKREALVGMPGAPSSTSSSFAAVTDSSLAGGCTTDALNIRTDEKMPAKGEISGQESNCDIENSWSQPMYGEISARFFKTTFPGIFQHENGWNHDEYFTVQDLSASAAATGNTPTANRSGKSFDFRLPLEATTSAAANGTGAGNSNFQLFARHADALPSTSTSNKKKRKRDSAGSSSSAIGGRVEKTAMSRMQPTATITSQQLLLHQQQQQHLQTHEQLQQLQHNDNAPTSTSLMVSGTPNSAGTGAANAGADQRRQRKKVYQCAHCTAEFPKLKDRNSHMITQHNYVRQNRRLICIQRPVATAATTTVTVTAAATAAATSSANAIAAGVDNVPVVNMADGYHSTLVRSDSLEFLEDSKQDIVKIEMDNAYQPLTAASAAATSTSGNVEGIDAKPELVDDKHSMALLPASSANTNVGGAIAAHEPVDRKLALQPLALTTPATKLAALYRMLVSYNISTLKDSHNLSEMEQKLIEQSIFFCYVCRRNFTSVKLYDAHLSEHPAECFTCGKTFQRWKNFSLHLKRHLGWKEFGCNVCDKKFVVRSALVEHMRMHTGHTPLKCKVCGKYFKRYSNLTQHRKRHGKQIIRKKEYVCHCGEVLPSKARFLWHKETHDAKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPLCKQTFAKSSIKAHMATHSMDTQHDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -