Basic Information

Insect: Philophylla caesio
Gene Symbol: RREB1
Assembly: GCA_963971545.1
Location: OZ020607.1:46581494-46588935[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.017 6 9.9 2.1 1 21 306 326 306 328 0.95

2 14 0.00035 0.12 15.2 0.1 1 23 338 360 338 360 0.98

3 14 2.8e-05 0.0097 18.7 7.5 1 23 366 388 366 388 0.98

4 14 3.4 1.2e+03 2.7 6.5 2 19 668 685 668 690 0.89

5 14 0.0087 3 10.8 0.2 2 21 701 720 700 721 0.93

6 14 0.0099 3.5 10.6 0.1 1 23 888 910 888 910 0.97

7 14 2.3e-05 0.008 18.9 1.2 1 23 920 942 920 942 0.99

8 14 0.00073 0.26 14.2 2.2 1 23 948 971 948 971 0.97

9 14 0.0035 1.2 12.0 2.0 1 23 1283 1306 1283 1306 0.95

10 14 0.0001 0.036 16.9 0.3 2 23 1663 1684 1662 1684 0.97

11 14 0.17 60 6.7 6.3 1 23 1690 1713 1690 1713 0.97

12 14 3.7 1.3e+03 2.6 5.0 1 23 1828 1851 1828 1851 0.97

13 14 0.01 3.5 10.6 0.5 3 23 1906 1926 1904 1926 0.96

14 14 0.0016 0.55 13.1 4.8 1 23 1932 1954 1932 1954 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.017	6	9.9	2.1	1	21	306	326	306	328	0.95
2	14	0.00035	0.12	15.2	0.1	1	23	338	360	338	360	0.98
3	14	2.8e-05	0.0097	18.7	7.5	1	23	366	388	366	388	0.98
4	14	3.4	1.2e+03	2.7	6.5	2	19	668	685	668	690	0.89
5	14	0.0087	3	10.8	0.2	2	21	701	720	700	721	0.93
6	14	0.0099	3.5	10.6	0.1	1	23	888	910	888	910	0.97
7	14	2.3e-05	0.008	18.9	1.2	1	23	920	942	920	942	0.99
8	14	0.00073	0.26	14.2	2.2	1	23	948	971	948	971	0.97
9	14	0.0035	1.2	12.0	2.0	1	23	1283	1306	1283	1306	0.95
10	14	0.0001	0.036	16.9	0.3	2	23	1663	1684	1662	1684	0.97
11	14	0.17	60	6.7	6.3	1	23	1690	1713	1690	1713	0.97
12	14	3.7	1.3e+03	2.6	5.0	1	23	1828	1851	1828	1851	0.97
13	14	0.01	3.5	10.6	0.5	3	23	1906	1926	1904	1926	0.96
14	14	0.0016	0.55	13.1	4.8	1	23	1932	1954	1932	1954	0.99

Sequence Information

Coding Sequence: ATGCTCGCCGCAGCAGCCGCTGGTACACAACCCACTTTGGATGCCATCCAATCGGACGTCACCAAAATGGAACGACGTAATTCCTCGACGTCGGAATCATCGTTGGAGCACTTGGATTTGGGACGTACGCCAAAGAAGTTAAGCGCACTGTCATCGGCAACATCCACACCGCACACGGCCGCGAACAacggcagcagcaacagcaccaacaacaacaacagcagcagcagaaaaaGACAAGACAGCAATGAGGCGATTACAATAGACACCAACAGCACAACCGCCACACCATCACAAACCGACCGCACTGTTGATggtgcaaatataaaaatactgcCTCACCAACATCGTCGTCTGCATGACTCCGACGAGGCCAATGACTACGACGACGACGATGAGGAATCGCCAGATGAACAGCGCTCAAAACAGAATGCACTCAGTGCAAGATCACAGCGTCACCACAAGCGACGCAGCATAGCACCGCGTTTAGATAAACGTACCAGCGTGCATCTGGAATTCAATGCGGATGATCCCAATTCACTGCGCAAGAAGTTTCGCTTCAATCGCAGTACCTCCGCTTCCGAACAAATAGCTAACAATGAGTCTGGTTTCGTGGACGCCAGCTGTAGTAGTCATTACCTGAATGCTTCGTCAGTGTCACTGGTGGCGGCGACTGCGGGTACGGCGGTGACGGCGATATCATCAGGATCCACATCCGCTGTTGGCATTAACTCGTCGCCACCTCACAATTCAATGTTTCCATCACCATCGGCTTCTGCCTCGGTGAATGGCTCACACAGTTCATCGTCGGGTGCTTCATCGCCGCGTGGTTGTGGCACCGGCATGGCTGCGTCGTCCGCCTCGGTTTCCAGTCCCGAATCTGGTATTGGTGATCGAGATCGCGAGGATATGAAGTTCGTTTGTACCATCTGCGATGTGGTGTCAGCAACAAGACACGAGTTCACGAATCACATACGCTGTCACAATTATGCTTCTGGTGATACGGAAAACTACACATGCGCTATCTGTTCCAAGGTTCTCTCTTCTGCCTCCTCACTGGATCGGCACGTCTTGGTACACACTGGCGAACGACCATTCAATTGTAAATATTGTCACCTCACATTCACCACCAATGGCAACATGCATCGGCACATGCGCACACACAAACAGCATCAACACAATCATCATCATCGCCGTAACTCGAATGGAACAAAGCATGCTAACAGTAgtcataacaacaacaacacaggGTCTGGCAATGCAGCCAACACGATTATAAGCAGCGGAGTAACCAACGCCTCCACGAACGCTGCCACCACTTATACGCAATTAAGCCATGGCTTGAATAGTGAAGGTGTCAAAACATCAGCAGCATCAGCGGAAGCCATGGAAGCAATGGTGACAGATGGTGTTGGTAGTGCCGCCACAGCTGCCACTATGGCAGGTGTGGTTGGCGCTGGCAGTACAGGTGTTAATGGTAAACGCTTACATAGCAGCGGCGTAGAAAGTTGCGAAAGTGACGGTGGTTGCTCAACAGACTCCTCATCAAGTGCCATCAGCCATAGCtcaaataataatcataataacaaaaataataatagcgaCAACATCAACAATAATGTCACCAgcaattacaataacaataacagcgCGAAGCGTAATAGTTTAGGTAATTTTAAGCGTAAAAGTAGTGATGAACACGTTGAAACCGGCACTAACGCCGACGATATGGCAATAATGGTAGCGATGAAGCGACGCGTGAAGACCACAATAAATAACAACGTAATCGGCGAGGATGCGAACGAAGTTGCTGCTCGTATTGTCCATGACAACACTGGTGCAAATACATCCTCTTCCGCTTCAGCGGCGTCAGATGATGACGTTCCCGAACAGAAGCCACTCTTTTCTTGTCCGATCTGTCCTGTCTGCAATCTTGGCGACTTTGGAGATATGCGCGCACTAGACAACCATCTGGATAGCGAACATTCCGATATACCGGCGAAATGCCGCCACTGTGAAGTGGTATTCCGCACACATCGACAACTGAGCTCGCATCCCTGCACACAGCACCTGCACAATAATCGTCAAATACCGTTGGTAGAATGCGTAAAATGTCACCGAAGCTTTGCAAATGCCAACGACTTGGAGCTACATTCGCGTGACTGTGACCCGGCTGAGGTGCCATATACGCGGCGGAGTCGTAGCCTGAGTGATAGTTTTACATCAATGCCAGTGTCGGAAGCCGAAATGGAGGAGAAGACGAGTTTTGCACGTAGCAATTTTTTCCGCCAGCTCTATTTGCAAAGTCAAAAGCCGTTTTGTGCACAAAGTTTGATCTCATTACCCTCGTCGCATCTCTCAACTAACGATGAGCGCGATGTTTTAAATGTCAGCAACAATGACATCAAACAAGAAGCAGACGCTGAGCCGACTGATCAATTAGCAAGCAACTTACTCTCACAACAGTCACACGACTCAAAAGATCTCGCTGATATACAATCCATACTGAATATGACTTCATCGTCATCGACATCAAATTTTCTAAAGAACTTTGAGCAATCAGTAAATACACCATCCAGCAACTACAGTTTGGATAAAGACGAGGAGGAGGCCCAAGACGCTTTTACGTCCGAATTTCGTAAAATGAAATTGCGCGGTGAGTTTCCATGTAAACTCTGTACAGCTGTGTTTCCGAATTTGCGAGCGCTGAAGGGACATAATCGCGTACATTTGGGTGCTGTCGGTCCGGCGGGACCGTTTCGGTGTAACATGTGCCCCTACTCAATTTGCGATAAGGCTGCGCTAGTACGCCATATGCGCACACACAATGGCGATCGACCATACGAATGTGCTGAGTGCAATTATGCTTTTACTACGAAGGCCAACTGTGAAAGACATCTGCGCAATCGACATGCAAAAACCACTCGCGACGAAGTTAAACGTGCCATCATTTACCATCCATCGGAGGACTCGACATGCGATGATCCCGCAAAGAAATTGCACATGTTCTCATCGCCAGACTTTGACGACGATATGGAGTTACAATATCAGCAACATCATCCCAAAGATCGTTCCACGCCTGTATCGCACCTCAAGGAAATGCTCACAGCAGAAAGTCCTTCAGCGAAACCGATGAAAATTCAAGTTAAGAGTTTGGAGCAATTGCTTGATAAGTCAACCGGCTCAATTGCTACCTATCATGATTCGTACGAAGAACGTCCTGCGCCACCAGTGCTTCAACAAGCCGAGGCCGCACCAATCGATCTAAGTATGGACGTTTTGGACCTAAGCAAAAAACCCTCAATAAAGCCGATTGAAAAGGAGGTAGTAGCTGCGGCACCAGCGCCCGTGGTAGAAAATGAAATCGATCCTGAGAAAAAACTTGATATATTTTCttatgtaaaagaaaatttaaatatgccaAAAATGCTTGAGCTCTGGAGTCTTTCTGCTCAATTCCCATTTATGCCTGACTTTCGTCCGTTGATGAATCAAATGTTTGCTGGTACCACTGCTGGCAATCCATTTTTGCAGTCCGCTATTGACTTGAATAAGGCAAGTATGCCGACGCCGCCCAACATGGCACCTCCAATGTTACCGCATTTGAACTCAATGATGCCGGACAAATTAAACGCTCACCCACATTCCACCCCTGATGCTAATGTGATGAACCAAATGCTACCCAAGTCTATGATGACACCTTCAGCTCCAAATCCTACTATGAATATGTCGCGTCATACACACATTGCACCCACAGTGCTACCAGGTGGACCTGTGAAAATGGTCATAAAGAACGGCGTACTAATGCCAAAACAGAAGCAGCGTCGTTACCGCACCGAGCGACCGTTCGCATGTGAACATTGCTCAGCGCGCTTCACACTTCGTTCAAATATGGAGCGACACGTGAAACAGCAGCATCCACAATACTACGCTCAACGGCATCGCAGTGGACATCACGCCATGCGGGGCCGCGGTTCAAGCAGCGCTGTAGCCATTAACAGCATCAGTAGTTTGCAAGCGGCATTTGCTCAAGCGCACAATCAAGCCGGCCAAGGACCAGGTAATGGAATGAGCTCATCGCCTATATCGGAACAGGTGAAGTACGCTATACTGGCGCAGCAACTGAAGGCTCGGAAGGACACTGACTTGCTGCAGCAAGCGCTAGCACACGGCTCAAGTAGCATTGTAAGTAATCATCAAATGTTGCTCAATGCTGGCGCTGCACTCGGACAGCTTGGCCAACCCAACGGACTGCAATTCGCATTACATCAATTAGGTCAACCGACAAACATTATCGGCTCCATTGAAGATGACGAGCCAAAACTGGTCATCGATGAGGATGAAGATGATGATGTTGAAGAGATATTCGATGAAAACGAAGAGGAGGATGATCTACAATTCACAAATGAGAACTTTGAAAGTATGCGCAATGTTCAAACACCAGCGGCTGTCGTTGAAGAAGTGACGGAAAGGCAACCTTCTAATGAGTCCACTAACGAAACAGCCAAGAAAGTTGCTGAAACCATACTGGAACAGGCGATTAAAAATGGCCAAAAACTTAATTCAACAACCGGAAAATCGAATTCTACAATTGCAGCAAAAGCAGCGCCATGTAAGCTGAGTGCGCCAGCTACACCAGCCGCGCCTACTGCACCTGTCACCCCAGCCAATACAATGAAAGCTATGATCGCACAAGCCGAGTCAGTGGGCAAATTCTTGAAGGAAGTAGCCAGCTCGCCATTCAAAGACGAATCGCAAGACTTGGTACCCGTTGCGAAGCTGGTCGATAATGCTACTAATAATTCCGTCTCTTTCAACAACTATTTCCGACCTAGCGACGTGCTCAACCACATGGAGCAGAGCGACGAGGAAGGTTTGGTTGCCTCTGGCAGCGCCAGCGAAAGCAACAACTCAGGCACCGAAGATGTAGCCATGCCAGCCGAACCAAAAAAGAAATCTGCGTATAGTCTAGCGCCAAATCGCGTCTCATGCCCCTACTGCCAGCGCATGTTTCCCTGGTCTAGTTCTTTACGGCGACATATCCTAACACACACTGGTCAAAAACCATTCAAATGTTCACACTGTCCGTTGCTCTTCACCACGAAGAGCAATTGTGACCGACACCTGTTGCGTAAGCACGGCGACGTAGAATCGGCAGTGTCTGTGTATGTCCCCGCCGAAGACGTCAACGAACCGATTCCGGTGCCCAAATCAGTTGAAGAGatcgaacaacaacaacgaaaacgaGATGAGGAAGAACGCAAGCGTAAAGCAGAAGAGGCACAATTGGAGCGCGAACGTCGAGAGAAAGAGCAACGTCTGCAGCAGGAGcaagaacaacaaaataaaatgtttaaacaaatgGCGGTCGcgcaactacaacaacaactgaaTGTCTCAATAAGCGCAGCCAACACTAACAATACTGAAGCTGATATCCGCGCAAAGGATAGCCTATCACAGCTGAATGCGGACTTGCCATATAAGTGTCATCTGTGCGAAAGCTCCTTTGCGGAACGTTTCAATTGTCTGGAGCACATCAAAAAGCAGCATGCGCCAGAATTCATGCTGCTCCTATCAAAAGGCGCCATCGTCAGCGAAGCAGAAGCCAACCAAACGCAGCTAATCGAAGATGAGGAACGACGTGTTGGCGAGGAGTCCAATGGTTTCGCTTTGATGCCAAAATTACCGGCATATACAAATCGCAAAGTCATTTGCGCATTCTGCGTGCGACGCTTCTGGTCTACCGAGGACTTGCGTCGTCACATGCGCACACATTCCGGCGAACGTCCATTTCAATGTGAGATCTGTTTACGTAAATTTACACTGAAGCATAGCATGTTGCGACACATGAAAAAACACACCACTCGCGGTCAAAATGGCACAGCAAGTGGTGATACTTCTGCAACAGGCAACAGTGGATCGGACTTTTCGGACGATGAACAAATGCCTACACCTACATCAATGCACTCCGTTAGTACTTCCACAGCAACAACGACAATAGCCAACGTAAGTTCGCCTACGTTAGCATCTGCGTCAACATTAACTAGTTTGCGTACACCCAAAATTCAAGAATTACTAACCAAAGCGAACGAATGGCGTAGCAGTCATTTGGTCGGCGAACAGAAGGAGAATATTGCCGAAGAGCAGCCAAACGGATTGCATAGCGATCTCATTGGTAATCTGTTGGGCATCAGTGACCAAGGTATACTCAATAAATTACTCTCGTCTGCCGATGAAGCTGCCAAACTATTGGGAGTGGAGAAGTAA
Protein Sequence: MLAAAAAGTQPTLDAIQSDVTKMERRNSSTSESSLEHLDLGRTPKKLSALSSATSTPHTAANNGSSNSTNNNNSSSRKRQDSNEAITIDTNSTTATPSQTDRTVDGANIKILPHQHRRLHDSDEANDYDDDDEESPDEQRSKQNALSARSQRHHKRRSIAPRLDKRTSVHLEFNADDPNSLRKKFRFNRSTSASEQIANNESGFVDASCSSHYLNASSVSLVAATAGTAVTAISSGSTSAVGINSSPPHNSMFPSPSASASVNGSHSSSSGASSPRGCGTGMAASSASVSSPESGIGDRDREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKHANSSHNNNNTGSGNAANTIISSGVTNASTNAATTYTQLSHGLNSEGVKTSAASAEAMEAMVTDGVGSAATAATMAGVVGAGSTGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNNNHNNKNNNSDNINNNVTSNYNNNNSAKRNSLGNFKRKSSDEHVETGTNADDMAIMVAMKRRVKTTINNNVIGEDANEVAARIVHDNTGANTSSSASAASDDDVPEQKPLFSCPICPVCNLGDFGDMRALDNHLDSEHSDIPAKCRHCEVVFRTHRQLSSHPCTQHLHNNRQIPLVECVKCHRSFANANDLELHSRDCDPAEVPYTRRSRSLSDSFTSMPVSEAEMEEKTSFARSNFFRQLYLQSQKPFCAQSLISLPSSHLSTNDERDVLNVSNNDIKQEADAEPTDQLASNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPAKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEMLTAESPSAKPMKIQVKSLEQLLDKSTGSIATYHDSYEERPAPPVLQQAEAAPIDLSMDVLDLSKKPSIKPIEKEVVAAAPAPVVENEIDPEKKLDIFSYVKENLNMPKMLELWSLSAQFPFMPDFRPLMNQMFAGTTAGNPFLQSAIDLNKASMPTPPNMAPPMLPHLNSMMPDKLNAHPHSTPDANVMNQMLPKSMMTPSAPNPTMNMSRHTHIAPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHAMRGRGSSSAVAINSISSLQAAFAQAHNQAGQGPGNGMSSSPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIVSNHQMLLNAGAALGQLGQPNGLQFALHQLGQPTNIIGSIEDDEPKLVIDEDEDDDVEEIFDENEEEDDLQFTNENFESMRNVQTPAAVVEEVTERQPSNESTNETAKKVAETILEQAIKNGQKLNSTTGKSNSTIAAKAAPCKLSAPATPAAPTAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATNNSVSFNNYFRPSDVLNHMEQSDEEGLVASGSASESNNSGTEDVAMPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPAEDVNEPIPVPKSVEEIEQQQRKRDEEERKRKAEEAQLERERREKEQRLQQEQEQQNKMFKQMAVAQLQQQLNVSISAANTNNTEADIRAKDSLSQLNADLPYKCHLCESSFAERFNCLEHIKKQHAPEFMLLLSKGAIVSEAEANQTQLIEDEERRVGEESNGFALMPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTTRGQNGTASGDTSATGNSGSDFSDDEQMPTPTSMHSVSTSTATTTIANVSSPTLASASTLTSLRTPKIQELLTKANEWRSSHLVGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00082376;
90% Identity: -
80% Identity: -