Basic Information

Insect: Philophylla caesio
Gene Symbol: -
Assembly: GCA_963971545.1
Location: OZ020607.1:16548528-16551271[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.22 78 6.4 6.0 1 23 237 259 237 259 0.97

2 10 0.022 7.8 9.5 1.6 1 23 267 290 267 290 0.96

3 10 5.6 2e+03 2.0 0.6 2 11 295 304 294 316 0.78

4 10 7.9e-05 0.028 17.2 3.4 1 23 322 344 322 344 0.98

5 10 0.00075 0.26 14.2 3.2 3 23 356 376 354 376 0.97

6 10 2.3e-06 0.00081 22.1 0.5 1 23 383 405 383 405 0.98

7 10 6.8e-07 0.00024 23.7 0.5 3 23 412 432 410 432 0.96

8 10 1.7e-05 0.0061 19.3 1.4 1 20 438 457 438 460 0.94

9 10 0.00046 0.16 14.8 0.4 2 23 466 487 465 487 0.93

10 10 0.00014 0.049 16.4 0.7 1 23 492 515 492 515 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.22	78	6.4	6.0	1	23	237	259	237	259	0.97
2	10	0.022	7.8	9.5	1.6	1	23	267	290	267	290	0.96
3	10	5.6	2e+03	2.0	0.6	2	11	295	304	294	316	0.78
4	10	7.9e-05	0.028	17.2	3.4	1	23	322	344	322	344	0.98
5	10	0.00075	0.26	14.2	3.2	3	23	356	376	354	376	0.97
6	10	2.3e-06	0.00081	22.1	0.5	1	23	383	405	383	405	0.98
7	10	6.8e-07	0.00024	23.7	0.5	3	23	412	432	410	432	0.96
8	10	1.7e-05	0.0061	19.3	1.4	1	20	438	457	438	460	0.94
9	10	0.00046	0.16	14.8	0.4	2	23	466	487	465	487	0.93
10	10	0.00014	0.049	16.4	0.7	1	23	492	515	492	515	0.95

Sequence Information

Coding Sequence: ATGGATACAGTTCCGACTTGTCGAGCATGTTTGAAAACTTCGCTAAATTATATTGATATCGATACTCCTTtcgagcaaaatattttagcaatTCCTTTGGACTCCTTACCAAGTACATTTACTACTTATATGGATTGTTTCCGAGCTTGTACCGAAGTCGGAGTAGCTGATAGAGAAGAAGAAATGCCCCAAAGCCTCTGTGAAGAGTGCGGATTTGAATTGACTATCGCTTGGAACTTTCGTTACAAAGCAGTGAATgcagataaaattttaaaaaacgcTATACGGAATCCAGATATCAAAGATCGAGGAAATGTTTTAATTGATGTTGACGTTAACGAAGCTCTTACTGAAATTGCAATAGTGGAACACATAAAAGGCACTCcgatagtcaaaaaaaaagagGAAGATACAGAGGATATTATCGTTGAAGGATGTGAAAATGAAGTATTCGAAGAAGTCCCAATTAACAGATCAAGTGCTGATCTTTCGCAGATAATAAAAGGAACGCAGGAACCTTATACCATTACTAATAATGGCTCATACGAATTAATAGAAGCTGAAGAATATGAGATCATAAAGTTAGTCGAAATTGGTATGGATAATATAGCTAAAACTAATGACGATTTTGTAGAAAATGGTGAAAAAAACCCAAATGAGGATAATATTGGCAATGCAATTGATAAGAAAACCGAACCAAACTCGATTTTCAACTGTTCTACATGCTTTCAATCATTTCAAACTCGTCGGCGGTTTCTACATCATTTGGAAACTCATACGGCTACTGATGATAAAGTACATATCTGCAAAATTTGCAACCTTAGCATTACAAAAGGGGAAACAATACGTAAACATATGAGAAGTACACACTCAGCGATAATACAGTGCAGTCAATGTGACTACCGATGTAAGGAGCTAAAAATGGAGGAACATGTGATACGCGCTCACGATGCTTCAAAGAGCTTTTCTTGCAACATTTGCgATAAATATTTCATCTCTCATACTTTATTGAACACTCATCTTAAGTATCATCAACGCAAGGAAGCAAATATCAAATCTGATGCCTGTGAAATATGTTGTAAGCGATTTTCCACGCAGCATTACTTACGATTGCATATGGAAGTGCATCGGAACGACCGACAACTTCACCAATGTGACTATTGTGATAAAATTTATGTTAGCAAAATAGCACTTGAAAATCACATTCGAATTCATAGGGGCGAAACAATAAATTGTGATCAGTGTGGGAAGCAATTTGTGCGCCAATACGAATTGAATGTTCACATGCGTTTCCACACACGTGACTACCCATTTAAATGTGAAGTTTGTGGAAAAAAGTTTGCAATTAAGGGGCACCTTCGCACACATATGTGGAGACATCAGGGATTGAAGCTACAATGTGAAGAATGTGGAAAACTATTCACCTCCACCAAGGCTTTGCAGGAACATTCGTTCGTACATAGCGAAATGCCATTTCCATGTAGTTATTGCGGGCGAGGATACCCATCAAAACAAAAATTTAAAGTTCATCTTAAGGCGACGCATCTTATCGAACTTACAGAAGAAGAACTTtccaaaattacaaaattacagCCTCCGAGACCACTACAACGGAAAAAACTCACTTTGGTACAAGCGGATAGCGTCATGAAGGAGATAGAAGTGAAGGATAGTGGGGAAGAAATCGAAAACGATGGAGAAGATATATTGGTCGAACTTTATTAA
Protein Sequence: MDTVPTCRACLKTSLNYIDIDTPFEQNILAIPLDSLPSTFTTYMDCFRACTEVGVADREEEMPQSLCEECGFELTIAWNFRYKAVNADKILKNAIRNPDIKDRGNVLIDVDVNEALTEIAIVEHIKGTPIVKKKEEDTEDIIVEGCENEVFEEVPINRSSADLSQIIKGTQEPYTITNNGSYELIEAEEYEIIKLVEIGMDNIAKTNDDFVENGEKNPNEDNIGNAIDKKTEPNSIFNCSTCFQSFQTRRRFLHHLETHTATDDKVHICKICNLSITKGETIRKHMRSTHSAIIQCSQCDYRCKELKMEEHVIRAHDASKSFSCNICDKYFISHTLLNTHLKYHQRKEANIKSDACEICCKRFSTQHYLRLHMEVHRNDRQLHQCDYCDKIYVSKIALENHIRIHRGETINCDQCGKQFVRQYELNVHMRFHTRDYPFKCEVCGKKFAIKGHLRTHMWRHQGLKLQCEECGKLFTSTKALQEHSFVHSEMPFPCSYCGRGYPSKQKFKVHLKATHLIELTEEELSKITKLQPPRPLQRKKLTLVQADSVMKEIEVKDSGEEIENDGEDILVELY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -