Basic Information

Insect: Philophylla caesio
Gene Symbol: -
Assembly: GCA_963971545.1
Location: OZ020607.1:122193223-122202341[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.9e-07 6.8e-05 25.4 1.6 2 23 178 199 178 199 0.97

2 9 6e-07 0.00021 23.9 0.5 1 23 205 227 205 227 0.98

3 9 1e-06 0.00036 23.2 0.7 1 23 233 255 233 255 0.98

4 9 6.7e-06 0.0024 20.6 0.5 4 23 266 285 261 286 0.92

5 9 6.9e-05 0.024 17.4 2.9 1 23 291 313 291 313 0.97

6 9 3.4e-05 0.012 18.4 3.7 1 23 319 342 319 342 0.98

7 9 0.00043 0.15 14.9 2.0 1 23 348 370 348 370 0.99

8 9 2.1e-05 0.0073 19.1 0.9 1 23 375 397 375 397 0.98

9 9 0.0013 0.45 13.4 0.3 3 23 405 428 403 428 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.9e-07	6.8e-05	25.4	1.6	2	23	178	199	178	199	0.97
2	9	6e-07	0.00021	23.9	0.5	1	23	205	227	205	227	0.98
3	9	1e-06	0.00036	23.2	0.7	1	23	233	255	233	255	0.98
4	9	6.7e-06	0.0024	20.6	0.5	4	23	266	285	261	286	0.92
5	9	6.9e-05	0.024	17.4	2.9	1	23	291	313	291	313	0.97
6	9	3.4e-05	0.012	18.4	3.7	1	23	319	342	319	342	0.98
7	9	0.00043	0.15	14.9	2.0	1	23	348	370	348	370	0.99
8	9	2.1e-05	0.0073	19.1	0.9	1	23	375	397	375	397	0.98
9	9	0.0013	0.45	13.4	0.3	3	23	405	428	403	428	0.94

Sequence Information

Coding Sequence: ATGGAAAGCATCTGTAGATTGTGTTTCCAACCAGCAGCGTTGTTCCAAGTGCCCGGTTACAATATACCCACCTGTGTCAAGTGCTCCGAACATCTAACTGCCAACGGCTTCTATCCCTCTGTGCGTGGCGGTGCTGGTGCTGGCGGCCCCAGTGCTGTGGACACACAAAATCTGGCGAATGTCGCCGCAGTCGCAGCACAATTGAGTAATAACGTCGCCGCTGCCGCCGGGAATAATAACGTCGCTGCGGTTAACGCTTTGGCACAACaattacaacagcaacatcaacaacaacaacagcagcagcaacaacaacagcagcaacaacagcaacaacatcaattACAATCAACAAGTTCTTCCGAAAGTGTGCAGTCCTCATCCGAGATTACAGAGAAGCAAAACCGGCAAAATCGACGCCAGGTCTCTTTGCAGAATCGCGCGAAATTAAAAACGGTCACAATGTCCGCCTTTGAATTGGAGAAGACCATACAGCAGTTAGACGTCGACTTGATTTTCAACGAGGAGGGCTCGTGTCCGCTCTGCAATAAGACATTCTCGCGCAAATCTTCACTACTCACACACATACGCAATCATGCGGCAGagcgaaaatttgtatgcaatttttgtaataaagGCTTTACACAGGCAGCCAATTTGCGTAATCACGAACGTATTCATACAAACGACCGCCCTTATGTGTGCGTGGATTGTGGCAAGCAGTTTACACAGATCACAAATTTGAATAATCATCGTCGTTTGCATACTGGCGAACGTCCGTTTGTCTGCATTGAACCCGAGTGTGGCCGCTCTTTTGCGCagGTGACCAATCTTAACAATCACATGAAGACACACCACAAAGTGCAGCAATACTGTTGCAATCAATGCCCGAAGAAATTTACACAAGTCACCTCGCTTAATCAGCATCTGCAGGCGCATGCTGGCATAACCGGCTACTATTGTCCGCGTTGTCCGGACAAGACGTTCAAACAGCAATCACAGCTGCATACACACATGAAATCGCATGGCATGGCCTTCCCATACGAGTGCACTAAATGCGATGAGAAATTCCTGCAGCAGGCGCATCTCGATCAGCATCTGAAGATGCACgatgaattcaaatttaaatgcgATATCTGTCCGAGCTCATTCAATCAGGAGACTTTGCTAAAGAAGCATGTACAGCGACATGTGGAGGGCAGGTACCTCAACTGTCCGGTGCCCAATTGCAATGAGGCCTTTGCTGTGCGCCAACATTTGTCCAAACATTTGCTAACGAATCATGCACACAATGAATTGCCGCCGCCGAAACGTTCAAAGAAATCGATAACATTGCAATCGCCGCAACAGCCGTTGGCGATGATTGGACAACCGCTCTCCATACAGCACACAGCCGGCCAACGTATGTGTTCAAATACTGGAAGAAAGCGCGGTCGCCCGCGCAAGAACAAAGAACCACAAAATCCTCCCATCAAAGTTGAGATTAATGAGCCGCTGCACAATCAGCATGTTATCAGCAATGCGAGCGGTCTATCCATACAGCAACAGATTAGCCAACAtatgcagcaacagcaacaacagcagcagcaacaacaactgcatcagcagcagcagcaacaccaTCTACTGGCCAATCAAGTGAAGGCGCGCTTCATACCGACCAAATAG
Protein Sequence: MESICRLCFQPAALFQVPGYNIPTCVKCSEHLTANGFYPSVRGGAGAGGPSAVDTQNLANVAAVAAQLSNNVAAAAGNNNVAAVNALAQQLQQQHQQQQQQQQQQQQQQQQQHQLQSTSSSESVQSSSEITEKQNRQNRRQVSLQNRAKLKTVTMSAFELEKTIQQLDVDLIFNEEGSCPLCNKTFSRKSSLLTHIRNHAAERKFVCNFCNKGFTQAANLRNHERIHTNDRPYVCVDCGKQFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQHLQAHAGITGYYCPRCPDKTFKQQSQLHTHMKSHGMAFPYECTKCDEKFLQQAHLDQHLKMHDEFKFKCDICPSSFNQETLLKKHVQRHVEGRYLNCPVPNCNEAFAVRQHLSKHLLTNHAHNELPPPKRSKKSITLQSPQQPLAMIGQPLSIQHTAGQRMCSNTGRKRGRPRKNKEPQNPPIKVEINEPLHNQHVISNASGLSIQQQISQHMQQQQQQQQQQQLHQQQQQHHLLANQVKARFIPTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191514;
90% Identity: iTF_00992861;
80% Identity: -