Basic Information

Insect: Philophylla caesio
Gene Symbol: su(Hw)
Assembly: GCA_963971545.1
Location: OZ020604.1:164211185-164214155[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00015 0.054 16.3 2.0 1 20 125 144 125 146 0.95

2 12 7.3e-06 0.0026 20.5 0.3 3 23 197 218 195 218 0.93

3 12 0.022 7.6 9.6 0.1 1 23 224 246 224 246 0.95

4 12 6.6e-07 0.00023 23.8 1.8 1 21 253 273 253 274 0.95

5 12 7.8e-07 0.00027 23.5 1.5 2 23 286 307 285 307 0.97

6 12 7e-05 0.024 17.4 4.4 1 23 318 340 318 340 0.99

7 12 9.5e-05 0.033 17.0 0.8 1 23 346 368 346 368 0.97

8 12 6.2e-06 0.0022 20.7 0.7 1 23 374 396 374 396 0.99

9 12 1.3e-06 0.00045 22.9 1.9 1 23 402 424 402 424 0.97

10 12 3e-05 0.01 18.6 2.6 1 23 428 450 428 450 0.98

11 12 3.9e-06 0.0014 21.3 0.3 1 21 452 472 452 476 0.91

12 12 0.022 7.7 9.6 0.2 2 23 497 519 496 519 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00015	0.054	16.3	2.0	1	20	125	144	125	146	0.95
2	12	7.3e-06	0.0026	20.5	0.3	3	23	197	218	195	218	0.93
3	12	0.022	7.6	9.6	0.1	1	23	224	246	224	246	0.95
4	12	6.6e-07	0.00023	23.8	1.8	1	21	253	273	253	274	0.95
5	12	7.8e-07	0.00027	23.5	1.5	2	23	286	307	285	307	0.97
6	12	7e-05	0.024	17.4	4.4	1	23	318	340	318	340	0.99
7	12	9.5e-05	0.033	17.0	0.8	1	23	346	368	346	368	0.97
8	12	6.2e-06	0.0022	20.7	0.7	1	23	374	396	374	396	0.99
9	12	1.3e-06	0.00045	22.9	1.9	1	23	402	424	402	424	0.97
10	12	3e-05	0.01	18.6	2.6	1	23	428	450	428	450	0.98
11	12	3.9e-06	0.0014	21.3	0.3	1	21	452	472	452	476	0.91
12	12	0.022	7.7	9.6	0.2	2	23	497	519	496	519	0.94

Sequence Information

Coding Sequence: ATGGGTGATACCAACAAAAAGTCTAGCCCAAAGTTCAAAGAACCTGGCGGaactgtgaaaatattaaacgaGCGCGCCTCCAAACGCACGAAACCAACTAGATCCGAATCCAGTACACCGCCAAAACATGTCAAGTTGTCCATTACAAAGAGCAAAAGCAGTCCTGAAAGTAAGGCAAACATGGATCATTATGTGCTGAAAACAATTAAGGATGAGGGCAGTGTTGGAGGTGGTGAGACAATAGCTTTTGTACTGTCCGAACAAAATGAGAAACAAAAAGATATTACAACTGCTAGTGGCGAAGTACCAGAAGAATTGGAAATAAGCGACGAGGAAGCAGATGAAGCCGATGGTAAAAATGATATCGTAGAGCATGTATGCGGCAAATGCTACAAAACTTTCAGACGTTTCAGTGGCCTTAAAAATCATATGGAATTTTGTCGTTATGACAGTGGTTATCATTTGCGAAAAACTGAAATGCTTAACAATTTGGATAAAATCGAAAAAGATGCTATTACAATGGAGAATAAGgatgtttgcttttgttgtggGGAGAGTTACGACACAttccatCTCGGACATATCAACTGTCCCGATTGCCCAAAATCATTCAAATCGCAAATGAGTTATGAGCGTCATATATTTATAACACACTCTGAATTCAATGATTATCCCTGTTCTATTTGTAATGCGAAATTGCGTAGCGCGAACTTATTGAAATTACACGAAGAACAGCATAAAAATCGGGGCAAGCCATTTGCATGTAAGATTTGTGGAAAGGACTTTACGCGCGCCTATCATTTGAAACGGCATCAAAAATATTCATCTTGTTGTGCTAATGGCACCGACTCCATGAAATGTAAAGTTTGCGATAAGACTTTCTTTCGTTTGGACAATTTGCGTGCACACCTACGACAGCACTTGGGTACACATGTGGCGAAGAAACCGGAATATCGATGCCCgcaatgcaaaaattgcttttacagtTTATCGACATTGAAtaTACACACCCGCACACACACGGGAGAGCGGCCCTTCGATTGCGATTTATGTGAAAAGAAATTCCCTTCTTTAATTGCACTGAAAAAGCATAGGCGCTATCACACCGGTGAGAAGCCATACACTTGTTCTGTGTGTAACCAATCGTTTGCTGTAAAAGAGGTTTTAAACCGTCATATGAAGCGGCATACTGGCGAAAGGCCTCATAGTTGCCTGGAGTGTAATAAGAGTTTCATACAAGCATCTCAATTGCGGAATCATGCGCGAACCCATATTTTACCTTACGAATGTTCAAActgcaatgaaaaattcaaaactattAAACAACTGGAGAAGCATAGAAAATCACATATACACAAGTGCTACGagtgtaataaaatattttctgatcCGTCGCAACTTGAAGACCACATGGCCAATGTCGTTCATAAAAtGTCAACATCTGTTAAAAGATCAAGCCCTCGAAAATCTAGGAAGCGTGCACGTACTTACTGTGCTGTATGCGATGAGGACTTCAGTACcgtaaaaaatttgcaattccACATTCTTAAAGTGCACGAAGTGGACCCTGAAGattttgttaatgaaaaacCGACGACAACAAATGCTATAACAACtagtaaaaatgtttataaaatatcaGGAGAAGCGTCAAACGAAATTCAGATTCTTAGTGAAACTGAGGGTAATGCCGCTATTAAAGCTGCTAGCAGTGGTAACAGCAAAGAAATTTACAATAACACAGATGCTGGCAGCAATGGAGGTTTAGTAGTCAAAGAATTCATAGTCAATGATGTACCTGTGGCGACCACAGAAGATGCGGTAGTTCTTGGAAATGAAGCATACACAGTCATACCTTTAGATGGAGATGGTCCTATTGAAACTGTTACTGTTGGCGCTTTAGATATATCACCGGAAATTAAAAAGGAGCGGCGTAAATCGTTAGGTGGGTCATTGGTGGTGGCTCTTGGTACTACGGATTCAGCTGAGTCTCGCGAACCAATTCAAATGAGTGAAGAGGATATAAAACTTAAAGAGAATGTGGGAAAATTGCTTGATATGTTGGTTGACAATAAGACTTTGAAGAAATTCGGTTGGCCAACTAATTCCGAAGAGAATGTTTTGTGTCGTGTTATTGAAAATTGTGGGTATAATTTAACAAAAGATGCTGAAACATATCGTGACTGTGACTATGCAACGCGCATGCGTGAATATGTAAAACTATTATTTACGGTTGTAATTCATAATGATTCCATTAAAGAACTGTTAAATAACTATCCAATCGACGAGGTAGTTGAATATGTGCTGGGTAATGACGATGACGAAGACGATGAAGTTGATAACGAAGAAGATGACAATAGtaacattaaaaattag
Protein Sequence: MGDTNKKSSPKFKEPGGTVKILNERASKRTKPTRSESSTPPKHVKLSITKSKSSPESKANMDHYVLKTIKDEGSVGGGETIAFVLSEQNEKQKDITTASGEVPEELEISDEEADEADGKNDIVEHVCGKCYKTFRRFSGLKNHMEFCRYDSGYHLRKTEMLNNLDKIEKDAITMENKDVCFCCGESYDTFHLGHINCPDCPKSFKSQMSYERHIFITHSEFNDYPCSICNAKLRSANLLKLHEEQHKNRGKPFACKICGKDFTRAYHLKRHQKYSSCCANGTDSMKCKVCDKTFFRLDNLRAHLRQHLGTHVAKKPEYRCPQCKNCFYSLSTLNIHTRTHTGERPFDCDLCEKKFPSLIALKKHRRYHTGEKPYTCSVCNQSFAVKEVLNRHMKRHTGERPHSCLECNKSFIQASQLRNHARTHILPYECSNCNEKFKTIKQLEKHRKSHIHKCYECNKIFSDPSQLEDHMANVVHKMSTSVKRSSPRKSRKRARTYCAVCDEDFSTVKNLQFHILKVHEVDPEDFVNEKPTTTNAITTSKNVYKISGEASNEIQILSETEGNAAIKAASSGNSKEIYNNTDAGSNGGLVVKEFIVNDVPVATTEDAVVLGNEAYTVIPLDGDGPIETVTVGALDISPEIKKERRKSLGGSLVVALGTTDSAESREPIQMSEEDIKLKENVGKLLDMLVDNKTLKKFGWPTNSEENVLCRVIENCGYNLTKDAETYRDCDYATRMREYVKLLFTVVIHNDSIKELLNNYPIDEVVEYVLGNDDDEDDEVDNEEDDNSNIKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045632;
90% Identity: -
80% Identity: -