Basic Information

Insect: Philophylla caesio
Gene Symbol: -
Assembly: GCA_963971545.1
Location: OZ020607.1:104931920-104934491[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.02 7.1 9.7 1.3 1 23 126 149 126 149 0.95

2 13 0.0025 0.86 12.5 1.2 2 23 155 177 154 177 0.91

3 13 8.8e-06 0.0031 20.2 6.1 2 23 187 209 186 210 0.96

4 13 0.00046 0.16 14.8 11.5 2 23 425 446 425 446 0.98

5 13 6.2e-06 0.0022 20.7 5.4 1 23 452 475 452 475 0.94

6 13 0.00045 0.16 14.9 0.5 1 23 480 503 480 503 0.92

7 13 4.1e-06 0.0014 21.3 3.4 1 23 513 535 513 535 0.96

8 13 0.0028 0.99 12.3 2.0 1 23 540 562 540 563 0.94

9 13 2.3e-07 8e-05 25.2 0.4 1 23 569 591 569 591 0.96

10 13 8.7e-06 0.003 20.3 0.5 1 23 597 619 597 619 0.98

11 13 8.5e-07 0.0003 23.4 1.7 3 23 627 647 626 647 0.99

12 13 8.4e-08 2.9e-05 26.6 0.2 1 23 653 675 653 675 0.99

13 13 0.023 7.9 9.5 0.0 1 23 680 703 680 703 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.02	7.1	9.7	1.3	1	23	126	149	126	149	0.95
2	13	0.0025	0.86	12.5	1.2	2	23	155	177	154	177	0.91
3	13	8.8e-06	0.0031	20.2	6.1	2	23	187	209	186	210	0.96
4	13	0.00046	0.16	14.8	11.5	2	23	425	446	425	446	0.98
5	13	6.2e-06	0.0022	20.7	5.4	1	23	452	475	452	475	0.94
6	13	0.00045	0.16	14.9	0.5	1	23	480	503	480	503	0.92
7	13	4.1e-06	0.0014	21.3	3.4	1	23	513	535	513	535	0.96
8	13	0.0028	0.99	12.3	2.0	1	23	540	562	540	563	0.94
9	13	2.3e-07	8e-05	25.2	0.4	1	23	569	591	569	591	0.96
10	13	8.7e-06	0.003	20.3	0.5	1	23	597	619	597	619	0.98
11	13	8.5e-07	0.0003	23.4	1.7	3	23	627	647	626	647	0.99
12	13	8.4e-08	2.9e-05	26.6	0.2	1	23	653	675	653	675	0.99
13	13	0.023	7.9	9.5	0.0	1	23	680	703	680	703	0.92

Sequence Information

Coding Sequence: ATGGAATTAACTACTGTAAGGGACACTGTCATGAACAACGACCGAATTTGTCGTGTTTGCTTGCAAGGGGATGTTGAATTATTTCccattttcaataaaactcaTATTAGCGGCGTTACGATAGCGCATATCTTATCAGAATGTACACGATATCCTATTAAACAAGAAGATCTCAAGTTACCACAacaaatttgtaatggttgtaTGGACAACGCCTGTGTTGCCTATGATTTCAAGCAGCGTGTGGAAAAGGCATATCATTCGTTAATGGGGTGGGCTGAAGTGAAAATCAAGTGTAATACAAAAGAAGAGTTGACTAATATACCTTTCAAGAATCGAAGGGATTATGGTACACAGACTGATAGACTAAGCTTACATCCATGTGAAATGTgcgaaatgaaattttttgatttgttggaACTTCGCCAGCATCGTAAGCAAATTCATAATAATAGTAACTTGCAGTGTAGAATTTGTGGAATAAGGTTTGAACGCATCAGACAGTTGCGTAGCCATTTGGTACATAAACACCCAAGTGTTGGTATTGCATTAGATACACAGTGTACAATATGTCGCAAACGCTTTTCGCGTAGAGAACACTTAAATCGTCATTTGCGCAACGTACACCATCAACCAGAGGTCCCGAGTCCTAGAGTCTCTCTCAAAGAGCCGGAAATTGAACTTCCTGATcatgcagtaaaaaaaaatcagaaatccAAACCTAAAGTTATTGaggtgaatatATCACCAAATAAAGAATTGCATTCTGTGAACTCTCCAAAAGCAGGAAAAACTGTCACAGCAGGCGATAATGACAGTATACCGGGACCTTCTCATTTTCTTGAATGTGGCTTAGATGTTACTGATGAGATTGAAAGTGAAATGAATATGGACATTAATCCTATTTCAAGTGATGATGAAGTATGCGATGGGATAGACTTCCCTGAAGACATATTACCTCAATTAAAGTTAGAGAACGAACAAGACATAAAAGTAAAGTGCGAATTAGACGTTTCTGAGGATGGCTTCGACATGCCAATGATGTCACCCGATTGGGAACGAAGTAAATCGCCTTTTTCTAATAACACCGTTAAAGAAGAGAGTGAAGTGTTTAACCCAATAACCTCGAAAAAGTCATCCGACATGAATCGTATATCGAGCAGTAATGAGGATGATGAAGAAGATGCCAACGAACGACGACGTATAACTGAAGCTGTTGACGAGTTTCTTGCTCAAAATTCGGCAGTTGACCAAACCGCTAATGCCGAAAATCGTTGTACAAAATGTCAACGAACCTTTTCGCGTCACTGTCATCTACGACGGCACATGTTGACTCACGTTGAACAGAAGGCGCATGCATGCACCCACTGTCCGAAGCGTTTCGCACGAAGCGATCACCTAAAAAAGCACATTATGAATTTACATCAAACGAAGGAGTTCAAATGTGATCAGTGTAACAGCGCATTTGCTCGTTCAGTGGAATTAACAAAACACAAGGAAGCACGTCATGGCAATGATCCTCACGCTCACAAGGTGCATGATTGCGAATATTGTGGCAAAAAGTTTACAAGTCGTACGTATCTTCGCAAACATGTCTTAATGCATACCGATCGCATATTTGCCTGCAAGTTTTGCGAAGAGACATTTAAAGAACGTAAAGCCCTCCGTGAACATGAGAAGGGTCATCATAGTGACCGGAGAAATTTTCTCTGTTCTGTATGTGGAGAAAGTTTCGTACGCAACGACTATTTACGTGTTCATATGCGGCGTCACAATGGCGAAAAACCGTACAAATGTCAATACTGTGGAAAAGGTTTTCCGCGCGCAACCGATGTTAAAATACACGAAAGATATCACACAGGCACTAAACCTAACTTGTGCAATCTCTGTGGCAAAGGTTTCCATCGTGCCTACAATCTCACCATACATATGCGTACACACACGGGAGAGAGGCCATTTAAATGTGAAGAGTGTGGGCGTGGATTCGCACAAAGTAATGATTTGAAAGCACACATACGACGACACACTGGTGAACGGTTCAAATGCCCTGAATGTGATGCTGGTTTTCTACAAATGTACGCACTGCGACAACATGCACAGGCAATACACGGCATACATATGGAACCATCAACAGGGCGCTTACAGAGATTTGCTCCCCTTGAAACAATAGTAGCGGCTGGAGAAACACTTGCAACCGTTAGTTTGCCGGAGCCTTTTGTAGAGCACGTACAATTAATGCAACAGCACCAAATTATGCAATCACAAATTTCAAATGCTGCCAACATACCGCCGACTCCTTCGTCTGTGTAA
Protein Sequence: MELTTVRDTVMNNDRICRVCLQGDVELFPIFNKTHISGVTIAHILSECTRYPIKQEDLKLPQQICNGCMDNACVAYDFKQRVEKAYHSLMGWAEVKIKCNTKEELTNIPFKNRRDYGTQTDRLSLHPCEMCEMKFFDLLELRQHRKQIHNNSNLQCRICGIRFERIRQLRSHLVHKHPSVGIALDTQCTICRKRFSRREHLNRHLRNVHHQPEVPSPRVSLKEPEIELPDHAVKKNQKSKPKVIEVNISPNKELHSVNSPKAGKTVTAGDNDSIPGPSHFLECGLDVTDEIESEMNMDINPISSDDEVCDGIDFPEDILPQLKLENEQDIKVKCELDVSEDGFDMPMMSPDWERSKSPFSNNTVKEESEVFNPITSKKSSDMNRISSSNEDDEEDANERRRITEAVDEFLAQNSAVDQTANAENRCTKCQRTFSRHCHLRRHMLTHVEQKAHACTHCPKRFARSDHLKKHIMNLHQTKEFKCDQCNSAFARSVELTKHKEARHGNDPHAHKVHDCEYCGKKFTSRTYLRKHVLMHTDRIFACKFCEETFKERKALREHEKGHHSDRRNFLCSVCGESFVRNDYLRVHMRRHNGEKPYKCQYCGKGFPRATDVKIHERYHTGTKPNLCNLCGKGFHRAYNLTIHMRTHTGERPFKCEECGRGFAQSNDLKAHIRRHTGERFKCPECDAGFLQMYALRQHAQAIHGIHMEPSTGRLQRFAPLETIVAAGETLATVSLPEPFVEHVQLMQQHQIMQSQISNAANIPPTPSSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00091568;
90% Identity: -
80% Identity: -