Basic Information

Insect: Philophylla caesio
Gene Symbol: Bcl11b_1
Assembly: GCA_963971545.1
Location: OZ020604.1:5974159-5979495[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0038 1.3 12.0 0.5 1 23 237 259 237 259 0.97

2 29 9.4e-05 0.033 17.0 2.9 1 23 265 287 265 287 0.98

3 29 0.36 1.3e+02 5.7 4.9 1 23 352 374 352 374 0.98

4 29 0.00028 0.097 15.5 1.4 1 23 380 402 380 402 0.99

5 29 0.028 9.9 9.2 0.2 1 23 435 457 435 457 0.98

6 29 0.0088 3.1 10.8 2.2 1 23 529 552 529 552 0.92

7 29 0.022 7.6 9.6 0.2 1 23 559 581 559 581 0.98

8 29 8.8 3.1e+03 1.3 0.7 1 19 589 607 589 610 0.89

9 29 3e-06 0.001 21.7 1.8 2 23 630 651 629 651 0.97

10 29 0.0019 0.65 12.9 0.3 1 23 658 681 658 681 0.96

11 29 0.34 1.2e+02 5.8 1.5 2 23 689 710 688 710 0.95

12 29 0.8 2.8e+02 4.6 2.4 1 23 793 816 793 816 0.92

13 29 5.4 1.9e+03 2.0 2.0 1 21 825 845 825 846 0.90

14 29 0.078 27 7.8 1.5 1 23 855 878 855 878 0.96

15 29 0.00022 0.078 15.8 0.4 2 23 894 915 893 915 0.97

16 29 7.5e-06 0.0026 20.5 4.3 1 23 922 944 922 944 0.98

17 29 0.00059 0.21 14.5 1.7 1 23 1099 1122 1099 1122 0.96

18 29 0.0044 1.5 11.8 0.7 1 23 1159 1182 1159 1182 0.97

19 29 0.0095 3.3 10.7 3.5 1 23 1197 1219 1197 1220 0.94

20 29 0.00011 0.038 16.8 2.0 1 23 1226 1248 1226 1248 0.98

21 29 0.0023 0.8 12.6 0.5 2 21 1275 1294 1274 1295 0.95

22 29 0.0011 0.39 13.6 1.9 1 23 1333 1356 1333 1356 0.98

23 29 0.02 6.9 9.7 1.0 1 23 1393 1416 1393 1416 0.96

24 29 0.00016 0.056 16.3 2.4 1 23 1430 1453 1430 1453 0.98

25 29 0.043 15 8.6 0.1 3 23 1485 1504 1484 1504 0.96

26 29 4.4e-07 0.00015 24.3 1.2 1 23 1510 1532 1510 1532 0.99

27 29 7.3e-07 0.00026 23.6 3.7 1 23 1538 1560 1538 1560 0.98

28 29 3.8e-07 0.00013 24.5 1.2 1 23 1566 1588 1566 1588 0.99

29 29 0.031 11 9.1 0.1 1 21 1594 1614 1594 1618 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0038	1.3	12.0	0.5	1	23	237	259	237	259	0.97
2	29	9.4e-05	0.033	17.0	2.9	1	23	265	287	265	287	0.98
3	29	0.36	1.3e+02	5.7	4.9	1	23	352	374	352	374	0.98
4	29	0.00028	0.097	15.5	1.4	1	23	380	402	380	402	0.99
5	29	0.028	9.9	9.2	0.2	1	23	435	457	435	457	0.98
6	29	0.0088	3.1	10.8	2.2	1	23	529	552	529	552	0.92
7	29	0.022	7.6	9.6	0.2	1	23	559	581	559	581	0.98
8	29	8.8	3.1e+03	1.3	0.7	1	19	589	607	589	610	0.89
9	29	3e-06	0.001	21.7	1.8	2	23	630	651	629	651	0.97
10	29	0.0019	0.65	12.9	0.3	1	23	658	681	658	681	0.96
11	29	0.34	1.2e+02	5.8	1.5	2	23	689	710	688	710	0.95
12	29	0.8	2.8e+02	4.6	2.4	1	23	793	816	793	816	0.92
13	29	5.4	1.9e+03	2.0	2.0	1	21	825	845	825	846	0.90
14	29	0.078	27	7.8	1.5	1	23	855	878	855	878	0.96
15	29	0.00022	0.078	15.8	0.4	2	23	894	915	893	915	0.97
16	29	7.5e-06	0.0026	20.5	4.3	1	23	922	944	922	944	0.98
17	29	0.00059	0.21	14.5	1.7	1	23	1099	1122	1099	1122	0.96
18	29	0.0044	1.5	11.8	0.7	1	23	1159	1182	1159	1182	0.97
19	29	0.0095	3.3	10.7	3.5	1	23	1197	1219	1197	1220	0.94
20	29	0.00011	0.038	16.8	2.0	1	23	1226	1248	1226	1248	0.98
21	29	0.0023	0.8	12.6	0.5	2	21	1275	1294	1274	1295	0.95
22	29	0.0011	0.39	13.6	1.9	1	23	1333	1356	1333	1356	0.98
23	29	0.02	6.9	9.7	1.0	1	23	1393	1416	1393	1416	0.96
24	29	0.00016	0.056	16.3	2.4	1	23	1430	1453	1430	1453	0.98
25	29	0.043	15	8.6	0.1	3	23	1485	1504	1484	1504	0.96
26	29	4.4e-07	0.00015	24.3	1.2	1	23	1510	1532	1510	1532	0.99
27	29	7.3e-07	0.00026	23.6	3.7	1	23	1538	1560	1538	1560	0.98
28	29	3.8e-07	0.00013	24.5	1.2	1	23	1566	1588	1566	1588	0.99
29	29	0.031	11	9.1	0.1	1	21	1594	1614	1594	1618	0.92

Sequence Information

Coding Sequence: ATGATGGTGTATCAATGTCGCACTTGTGAGACAAAACTGGGTAACTTCTATTCACTGTCAGATCTATTAGATGAAAAACGTTACGCTAACAAAACACTTGCAGACTTCCTTTGGGATATCGCGCAAATTgataataaaacaGAAGACTCCAAACGTTTGCCACAACAAATTTGCGGAAGTTGTTCGCGCAAGCTTAAAAATACACATTCATTTGTTTTGCAAGCACAAGAAGCGAATAAAAAACTTTTAGGCAGATTATATATCGAAAATGTTGGCTCTGACGACGGCAAAGAGATGGCAGGCACTTATAACGATTGTCTATTGGAAACTCCCATTGATATACCAATTCCGCAAACGGAAGTTAAGAAGGAGAATTCCGTTGACGAGAATATGGTACTTTGTCCAAATACCTTAACTGTCACACATACAAATGAAGACGATATAGATGTTAAAAAATCGGAAAGCTTTCAATTGCATTGTACAGAAAAGGCTTCTGAAGATGTTGAGAGTGTCAGTAATGAAAATAACGCTGGAATCGATCCAATTACTACAGTATCAACAAGGTGGAAAAATGAAGATTTAGATGACTTGGAAAATAATAGCGACTGggataataaagaaaaagaagaaACTGTTCCTACCAAACGACGTCGTATAAGGCGACATTCTGAAAAAACAGATTACACCTTTCGTGAAGAACATTGTAggtatttttgtaataattgcGAGAAAAGCTTCGCTTGGAAAAAAGATGCAATACGCCATATGAATATACACTTGGGCATTTTTCCTTTTGAATGCGACCAATGTAATAAACGTTTCCAGAGGAAAGATAAATTTGACAACCACATGAAAATACATTCCAAAGGAGCCACAGTCATTCGTACAGGGGACAGAATGCATTCGGTCAAAGAAATTGAAACGAGTGATTATCAAGGCGGTGAAAATTGCGCTGAGCTGCCTTCGATGTCTACTCCTCAAAAAAAACGTCGTAGAGTCAGATCACTTTCTAAAGAAAAGTTGGAATTCACGTTTTACGAAGATGGAGGCCGTTACCATTGCACGGGGTGCGAACAAAGTTTTACTTGTAAAAAAGATGCTGAACGGCACGTAAAAAGTCATATTGAAATTTCCGCATATGAATGTGCCGAGTGTAACCGTCGATTCCAGCGAGAAGATACATATTCAAATCATTTGAAGACACATAAAAAACGTCTAGAAGGAACTAAGCAACCAAGGCTTGCACTCCGGGCAGAGTGGAATTTCGGAGAGCGCCTTTACACAGATATGCGTTCCTGTTCATTCGAATGCAAACTCTGCGCAAAAATTATAACGAACGTCAAGGATTTAAGGGATCACTTGCTTAGTCATAACCAGCCCGATAGTTTGCGTTTAGATGTTGAAAGTGACGTCTTGAAagagtttttttctaattttgacGGCGATATGGACATAATAAAGATGCAGATATGCCAAGACATTAATGTTAAACAATACGCAAAATATTATGCCATTGTCAATGCTAACGGTTACGAAATGGCACTTAGCGATTTTGATTCAGAGACTGATGCTAATGAAACTAAATACGAATGTGAACTCTGTCGTGAAAAGTTTGTTCGTAAGTGCCAATTGTTCCAACATTCAATGGCAGAACACGCACAAGACAACCTGCCATATAAATGTAACGTTTGCAAGTTGGAATTCGTGAATGAAGCAATGTTCGGGCTACATTCTCGGATCCATTGCAGGAACCGTGATAAAAAATATCAGTGTCTCAAGTGTCCGGGTAAATTTGTTTGGTTACAGAACTTGCAAGAACATAATTGCTCCAACCGTCTTAATACTTGTACGTCCAAATGTCCGGACAATCGCAAACTACGTTTTTTGCAGTGTAGTTTTTGCGACAAAACATTTCGTTATGCAACTGACTTGAAGCGTCATCAAGAGACGCATAACCTGAACAGTCGCTCTCATGTGTGTCCTATATGCAGCCAACCTTTTTTGAAAGCCGAAAACTTGCGTCAACATTTGCGACAAGCACACGAGCAAATAAAACGACGTATTGAATGCTGTTTATGCACTGAAAAACTCAATACACTTGCTCAGCTTCGAACACATTTGACCAATCATTCGGATGGTTGGACCGGTTTAAGTTACGCGgagggaaaatattttaaggtgCATTGGCCTCAAGGCTGTCGAGGAAAAGAAGGCGAAGTAGAACAGAGTATTCTTATCGACTTTGCAggacaaaatttaacaaattattattcaGCTATGGATGAAAGTGGCAACGAACTAGATTTATACGATTCGGAGACCGATTTGGAATTGGAATCACTCACTACCGCCAATAAAGAACCTTCATCTAGTTCCTACACGTGTGATTTGTGCAAGCAGGTATTTTTCCGAAGATTACGTATTCTGCAACATCAACATAGCGCACATGCTGAGGAGAAAGAACCATTTCCACATGCTTGCACTCGTTGCGAGAAGCAATTCGTTTGCTTGGGCTTATTAGAGCAGCACTATAAACGTGATTGTGGCAACATCTTCAAGCGTTTCGATTGTCAACGCTGCTCAGCGCGCTTTGTGTGGGAGGAAAACCTGCAACACCACATGCAACGTCAGCATATAGATCCAGAGCAACAAATAAGTCGGCAACTTGCCAATAAACTGCAATGTGAGCAATGTAATAAAGTGTTCGTTTGGCCAAAGGATCTAACACGCCACAAACGTATCCATATGCCCGACGATGAAAAGTTCGAATGCCTATATTGTGAGCGTAAATTCTATAGAAAGGACCATTTACAAAACCACATGAAAGTGCACGGTGCAGGTGACAGCGTGGATGCAGCAACTGCGGTATCTAACAAACGCGAGTTTAATCGCACGGTAAATGCTGTCGACCGCCATCTTTGCAAGCCGATTGGCTTGAAATGTGTCCAATGCAAAATATGTCTATCAAAGCATACAAAAATAGCTGATCTGCGTGCGCATCTCTTAGAGCATCGCACTGATGTTTCTTTGTCGCAACATGTTACAAGTAATTTGGAAATATCGCAACTTTTCTATCCTGATGAGGCGCCGTTGACTATCGATTTGCTAATGGCAAGAATGAAAGCAGATATAAATGCCGGCCAGTTAGATCGGTTTTACTCAATCACCAATGAATTGGGCCATGAGCTAAGTATCAGCGATTCTGATACAGATGATACAGATTCGGACTCTGAACCTGATGAAATTTCAGAAAACGCAATGGGACACAACACTCGGCACTCAAGACGTTCAACATACAATTGCGATTTGTGCAGCATTACTTTTACACgaaaatttaaactatttgcTCATCAAGCAAGTAAGCATATTTGGAATGAGGCGCCACATGTTTGCCAGCATTGTCAAGCGCACTTTTTGTGCGATAAACTCTTGCAGTCGCATTACCGCCACCAATGTAAGAATTTGCTGAAGCGTTATGTTTGCCGGAAGTGTCCTCAGCGTTTTATGTGGAAAGATAATCTTAAAGTACATTTGAGCACAATGCATCCTGACAGCGTTGAAATGAAAAGGaTTTTAGCACCCAGTTCATTTGATTGCGAAGAGTGTTCGAACAGTTTCCACGCGCGAAAGGATCTAAAACGCCACATGATGGCACACCATGCTAATGCTATTGGTTTTCCATGCCTCTGGTGTCCTCGTAAATTTTAtcgtaaaagcaatttttatttgcacatcAAACGTCATGGCATTTCACCGCAGGAACTAAGTGCAGCAGCAGCTCATATAACTGCTATTAAAGGGCCAAATGGGGAAAAGCAAATACAGTGTCGCCAATGTAACATTAAGTTCAAAAGTATCTCGGCGTTACGTTCCCATCAGCGCCAAGAGACGTCTTCACACCACAATTCTCAACAGAACTTTTCGATTATGAATGATGTGGGTTTCGAATTGGATATAGATGATTCGGAAACAGGAGAGGAAGATAATGAGAAGTCGTACAAGTGTCAAATGTGTGGTTTGGTTTGCAAAAGGCGGTATGAGATGGGTCAGCATCAGTTAACAGTACACAAACACGAGCATATAACTCTGAGGTGTGACAAGTGTGTTTTTAGAACGGTATCAAGTGAAGTAATGGCACATCACTTGCACACACAATGCAACAACACCGTAAAGCAGCACCAATGCACACAGTGTTCATACAAATTCATGTGGCCCGAGAATTTGAATGCTCACTTGAAGTTAGTGCATCCACCATCGCCGGATGAAACTTTCACTCCGCCAGAAGAATTTCGTTGCGATAAGTGTGATCGCCAATATAATCGCAAAGACCGGCTGTTTGCTCATATCAAAAAGATGCATTGTCCAGACAGTGATGCTCCCACTTGTAGTAGGAATACTTCCAGGGAGTTATCACACGTTAAGAAAACTGAATCGAAAGAGAAAAGGGTCCTTTGTGCATTTTGCGGTCTCGCCGTGAGCTCAACAAACTTGATTGTTCATATGCGACGACACACTGGCGAGAAGCCATTCCAATGTGAATTCTGTGATAAAGCATTTCCGCGATCCTCCGATTTGTCTTCACATAGGCGGACTCATACTGGCGAAAAACCACATCGATGTACTGTGTGTAGCAAGTCTTTTTCGCGCTCTTATTGGTTGCGCACTCACATGCGTGTGCATTCTGGTGAAAAACCTTATAAGTGCACCTATTGTGAGAGAAGTTTTACGCAATCCAATGATCTTGCCGTACATATACGACGACATACCGGTGAGCGACCGTATGTTTGTAACATTTGCGGTGATCGTTTTATTCAGGGAACGGCGTTGAAGAACCACCGCATAGCTCAGGGTCATTTCGAAGTGGATAAAACGCAGGATATGTCGGTAGAAGTTAAACAGTAG
Protein Sequence: MMVYQCRTCETKLGNFYSLSDLLDEKRYANKTLADFLWDIAQIDNKTEDSKRLPQQICGSCSRKLKNTHSFVLQAQEANKKLLGRLYIENVGSDDGKEMAGTYNDCLLETPIDIPIPQTEVKKENSVDENMVLCPNTLTVTHTNEDDIDVKKSESFQLHCTEKASEDVESVSNENNAGIDPITTVSTRWKNEDLDDLENNSDWDNKEKEETVPTKRRRIRRHSEKTDYTFREEHCRYFCNNCEKSFAWKKDAIRHMNIHLGIFPFECDQCNKRFQRKDKFDNHMKIHSKGATVIRTGDRMHSVKEIETSDYQGGENCAELPSMSTPQKKRRRVRSLSKEKLEFTFYEDGGRYHCTGCEQSFTCKKDAERHVKSHIEISAYECAECNRRFQREDTYSNHLKTHKKRLEGTKQPRLALRAEWNFGERLYTDMRSCSFECKLCAKIITNVKDLRDHLLSHNQPDSLRLDVESDVLKEFFSNFDGDMDIIKMQICQDINVKQYAKYYAIVNANGYEMALSDFDSETDANETKYECELCREKFVRKCQLFQHSMAEHAQDNLPYKCNVCKLEFVNEAMFGLHSRIHCRNRDKKYQCLKCPGKFVWLQNLQEHNCSNRLNTCTSKCPDNRKLRFLQCSFCDKTFRYATDLKRHQETHNLNSRSHVCPICSQPFLKAENLRQHLRQAHEQIKRRIECCLCTEKLNTLAQLRTHLTNHSDGWTGLSYAEGKYFKVHWPQGCRGKEGEVEQSILIDFAGQNLTNYYSAMDESGNELDLYDSETDLELESLTTANKEPSSSSYTCDLCKQVFFRRLRILQHQHSAHAEEKEPFPHACTRCEKQFVCLGLLEQHYKRDCGNIFKRFDCQRCSARFVWEENLQHHMQRQHIDPEQQISRQLANKLQCEQCNKVFVWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQNHMKVHGAGDSVDAATAVSNKREFNRTVNAVDRHLCKPIGLKCVQCKICLSKHTKIADLRAHLLEHRTDVSLSQHVTSNLEISQLFYPDEAPLTIDLLMARMKADINAGQLDRFYSITNELGHELSISDSDTDDTDSDSEPDEISENAMGHNTRHSRRSTYNCDLCSITFTRKFKLFAHQASKHIWNEAPHVCQHCQAHFLCDKLLQSHYRHQCKNLLKRYVCRKCPQRFMWKDNLKVHLSTMHPDSVEMKRILAPSSFDCEECSNSFHARKDLKRHMMAHHANAIGFPCLWCPRKFYRKSNFYLHIKRHGISPQELSAAAAHITAIKGPNGEKQIQCRQCNIKFKSISALRSHQRQETSSHHNSQQNFSIMNDVGFELDIDDSETGEEDNEKSYKCQMCGLVCKRRYEMGQHQLTVHKHEHITLRCDKCVFRTVSSEVMAHHLHTQCNNTVKQHQCTQCSYKFMWPENLNAHLKLVHPPSPDETFTPPEEFRCDKCDRQYNRKDRLFAHIKKMHCPDSDAPTCSRNTSRELSHVKKTESKEKRVLCAFCGLAVSSTNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLSSHRRTHTGEKPHRCTVCSKSFSRSYWLRTHMRVHSGEKPYKCTYCERSFTQSNDLAVHIRRHTGERPYVCNICGDRFIQGTALKNHRIAQGHFEVDKTQDMSVEVKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -