Pcae057499.1
Basic Information
- Insect
- Philophylla caesio
- Gene Symbol
- -
- Assembly
- GCA_963971545.1
- Location
- OZ020607.1:2600523-2600852[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-09 2.3e-06 29.6 0.1 4 40 14 50 11 54 0.91
Sequence Information
- Coding Sequence
- ATGCCAAAAAGGGGACAAATCCGAAAGTGGACTCAGCACAACATGAAAGAGGCGATAACGGCTGTTCGGAGTAATGAGTTAGGGATACTGTCGGCTTCTAAAAAATACGAAGTACCGCATACAGCACTTCAAAGGTTTGCTAGAAGCAAAAAATCCATTCAAGAAATATTTTCCACAAAGTTGGGTCGTAAGCcagtttttagtaaaaattttgagGAGGAACTTGTAAAGTATCTGCTAGAAATGGAGTCAATGTACTGGGGTCTCACACGGGAAGATGTGCGCTCACTAGCTTTCCAGCCAGCAAAGCAAAATGGCATtccaaattaa
- Protein Sequence
- MPKRGQIRKWTQHNMKEAITAVRSNELGILSASKKYEVPHTALQRFARSKKSIQEIFSTKLGRKPVFSKNFEEELVKYLLEMESMYWGLTREDVRSLAFQPAKQNGIPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189323;
- 90% Identity
- iTF_01189323;
- 80% Identity
- -