Pcae058337.1
Basic Information
- Insect
- Philophylla caesio
- Gene Symbol
- -
- Assembly
- GCA_963971545.1
- Location
- OZ020607.1:16619352-16620704[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-07 0.00032 22.7 0.1 3 45 218 260 217 260 0.91 2 2 4.5e-08 6.7e-05 24.9 0.0 11 41 336 365 332 368 0.86
Sequence Information
- Coding Sequence
- ATGCTTAATGAATTTGAGGAAAATACCAACGAGAGCGACATCAACAGAATAGCGTCTAGTGAACACTTAAACGATGTCGATGAGAAAGAGAATATCATTCAATCGACATTACAACATAAACAACAGCAGCACCACCAACATATAAGGGACTGCAAAACAGTGAACACTGAAAATCTACTCTCTCCACGCAAAGATGTTTTTGCGAATCACCAAAATGAGCCAGCAGAAGCCGATAATGTTCTCATGCTTACACGTTATGACAATCaacattttcatttcgaataTGTAACACAGACGCAAGATGAAAATTTATTACAGACAACGTTAATCAGGGATCACACTGCAACAGCCCAGCTCAGCGAAAGTTCTAACAATGGAAATCAGAGGAGTAGAGttccattttttcaaaatcacaTATCAGAAAAAATTGTAGTTAAAGACGAAAATTCACGCGCCAGTAGCAAAACAAGCAATATAGATTTCGCAGCGATGGTAGCCGAAGCGTGCGAGggaatttttgatgaaattgaaAACGACTTGCGTTCTTACAATATTGACAGTGATAATAACAGTTGCAACGAAATTGAAGCAGGTGCGGATTGTGACCGTTGTAGTGTTGTAGAAAAGAGAAAGAAACGCGCACACAATTCCGAAGCAGTTCAACTTGCAACGAAAGCGGTTGTGGAAGGTGGCATGACACTAGGTGAGGCAGCAAAGTGCTATAATGTGGTGCGTTCAACAGTATCATCACGTGTAGCGAAACATCCCAAACGTAAAAGACGAAAATCGAATAAGCAGCTAGAAGAACTAATTTATAGTAAACTGATGGCCGGCATACAGATATCTGAAATATCACGCTCTCTGCATGTGCCCAAGTCGACCGTTCATTTGCATAAAACAAGACTTAAGGACCGGGGATTGCTACCGGCTGTGTGGATCAATAATGGCAGTCAGGATGTGGTTGACACTGGCGTTCAGAAACGACTAATGCAGGCATATCGTGGACACATAGTTAACGGCATGTCAGTACGCTTCGCTGCCGAGTTTTTCTCGCTGCCGCTGACGACCTTATGGCGATACATAAAACGTAGAAAAACCTCTACAATAACGGCTATTAAAAATGATAGCAGTACGTGCGCAGCAACGGAAAGTTCAATCAGCCAAGAAGAAACTACAGAATCTACAGCTAGAACACCGTATGAGAATATAGAGAAAGATGGGAACTcggaaatgcaaaaaattcaattacCCTGCACATCATCATTATCAACCTGCCCCACAACTTTTATGAAAGTTAATCCAAATGAAGATGCTCTTTTTGAGCAATCTTTAATTAATCAACTTTTAGAATAA
- Protein Sequence
- MLNEFEENTNESDINRIASSEHLNDVDEKENIIQSTLQHKQQQHHQHIRDCKTVNTENLLSPRKDVFANHQNEPAEADNVLMLTRYDNQHFHFEYVTQTQDENLLQTTLIRDHTATAQLSESSNNGNQRSRVPFFQNHISEKIVVKDENSRASSKTSNIDFAAMVAEACEGIFDEIENDLRSYNIDSDNNSCNEIEAGADCDRCSVVEKRKKRAHNSEAVQLATKAVVEGGMTLGEAAKCYNVVRSTVSSRVAKHPKRKRRKSNKQLEELIYSKLMAGIQISEISRSLHVPKSTVHLHKTRLKDRGLLPAVWINNGSQDVVDTGVQKRLMQAYRGHIVNGMSVRFAAEFFSLPLTTLWRYIKRRKTSTITAIKNDSSTCAATESSISQEETTESTARTPYENIEKDGNSEMQKIQLPCTSSLSTCPTTFMKVNPNEDALFEQSLINQLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -