Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020197.1:4314610-4323931[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.4 1.4e+03 2.4 0.2 3 16 107 120 107 122 0.88

2 18 6.1 1.2e+03 2.7 0.1 2 23 165 187 164 187 0.90

3 18 0.00041 0.079 15.8 3.3 1 23 193 215 193 215 0.99

4 18 0.029 5.6 10.0 1.5 2 22 225 245 224 245 0.95

5 18 1.3 2.5e+02 4.8 0.8 3 23 393 414 393 414 0.92

6 18 0.28 55 6.9 5.0 1 23 423 447 423 448 0.95

7 18 3.4 6.7e+02 3.5 0.2 2 23 461 483 460 483 0.90

8 18 0.044 8.5 9.4 0.6 2 23 583 605 582 605 0.93

9 18 3.4 6.7e+02 3.5 0.7 1 20 732 751 732 755 0.85

10 18 0.0001 0.02 17.7 2.1 1 23 764 787 764 787 0.98

11 18 0.013 2.6 11.0 2.0 2 23 862 884 861 884 0.96

12 18 0.025 4.8 10.2 1.3 1 23 1109 1132 1109 1132 0.98

13 18 0.022 4.2 10.4 0.7 1 23 1143 1166 1143 1166 0.96

14 18 0.0022 0.44 13.5 0.3 3 23 1172 1192 1172 1192 0.99

15 18 7.3 1.4e+03 2.4 0.3 1 21 1345 1367 1345 1368 0.93

16 18 0.65 1.3e+02 5.7 0.4 1 23 1383 1405 1383 1405 0.94

17 18 0.0036 0.7 12.8 0.2 1 23 1456 1478 1456 1478 0.98

18 18 0.012 2.4 11.2 2.7 1 23 1533 1555 1533 1555 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.4	1.4e+03	2.4	0.2	3	16	107	120	107	122	0.88
2	18	6.1	1.2e+03	2.7	0.1	2	23	165	187	164	187	0.90
3	18	0.00041	0.079	15.8	3.3	1	23	193	215	193	215	0.99
4	18	0.029	5.6	10.0	1.5	2	22	225	245	224	245	0.95
5	18	1.3	2.5e+02	4.8	0.8	3	23	393	414	393	414	0.92
6	18	0.28	55	6.9	5.0	1	23	423	447	423	448	0.95
7	18	3.4	6.7e+02	3.5	0.2	2	23	461	483	460	483	0.90
8	18	0.044	8.5	9.4	0.6	2	23	583	605	582	605	0.93
9	18	3.4	6.7e+02	3.5	0.7	1	20	732	751	732	755	0.85
10	18	0.0001	0.02	17.7	2.1	1	23	764	787	764	787	0.98
11	18	0.013	2.6	11.0	2.0	2	23	862	884	861	884	0.96
12	18	0.025	4.8	10.2	1.3	1	23	1109	1132	1109	1132	0.98
13	18	0.022	4.2	10.4	0.7	1	23	1143	1166	1143	1166	0.96
14	18	0.0022	0.44	13.5	0.3	3	23	1172	1192	1172	1192	0.99
15	18	7.3	1.4e+03	2.4	0.3	1	21	1345	1367	1345	1368	0.93
16	18	0.65	1.3e+02	5.7	0.4	1	23	1383	1405	1383	1405	0.94
17	18	0.0036	0.7	12.8	0.2	1	23	1456	1478	1456	1478	0.98
18	18	0.012	2.4	11.2	2.7	1	23	1533	1555	1533	1555	0.97

Sequence Information

Coding Sequence: ATGGCATTTGATACCGATCCAGACTATCATCCAGATGATGAATCGGAAGATAGTAATGATGATCTTGAAAATGATGCAGACTATAATCTAGAAGGATCAAAAGATAGTAATGATTATGTTCTAGATGAAGATTTTTCCAAAGCAGGTCCTAGTAAAGGTGCATTAAGTGATAGAAGAGAAACCCATTCAGTGACTATTAACAAAGCAAAATTGGTGCCAAAATCTAATTGTGTTCGAGAGAACATCATATTTAAGTCTACAAAAACAAAGAGGAAAATATTAAGttgcAAACGGGATAATGCTACAAAGTTTTGGGGGTGTCCCCAGTGCAGCCGAACATACACCTTAAAAGATCTGTTGGATAAGGAGAGTATACCAGAAGATCAAGTTATTGTGGACAAACACATGTTTTATTGTCCCGTTTGTCCACTGCATGAGGACAAGCCAAAGTCTACCATACTCGAAAGAGTCCACCCTTCCACTAACCACCTGATTTGTCCCCGCTGCAAACTAAAAATAAGCGGAATAAATACACTCAAGAAACACTTGATCGCCGAGCATGACGTTACATTATTGTACAGATGCGAATACTGTGAATACAATACATCTAAATCGGACAGTCTGCGGAGACACAAAAAAACGCACACAGCCCTACAAAAAAAGGAACAGATTCGGTGCAGTCACTGTCATTTGGAGTTTGATACCATCGAAGAGTTTAAAGAGCATATGAAGAAAGTGCGATGGATGCAGAAAAGGAAAGAAACGAAGATGAAGGAAGATGGAGACGTGGATGGGGCGAAAACAGATTTTGAGAGCTTTGCTTTAAGCGACTTGGATGACGAAACGGTAAACGTTAAGGTACTGAACGACGAAGATATCAggGATGACGAACAACAAAGCAGTTTAGAGCTTCTTAAAGTGTTAAATTGGACACAGTCTGATGAAGAGGAAGTATCAAAAATATCTGCTTTTAAAGATAAAGCAGATCACAATGAAGTTATCACCATAGAAATGGAAGAGTCTGAAGACGCAAATGAAGATTACTTCAAGGGCACTAAGTTGGACAAAAAGCAAAAGAAGAAAGAGATTGTAGGAAGGAGCGGGCACGATAGTACAAtaagagaaaataataaagaagGAATTAATGATGATAGAAAACAGGAATCAGGGCTTGGTTGCAAAGACTGCGACTACAAAGCACAGAATAACGGACACCTCCTTATCCATAACCAACTTATACACGGAGATCTGGGAACAGacaatatctataaatgttcgCAGACGTCTTGCAAATATACCTCAACTGATAGGGATAATTTTAGAAACCACGTAACCAAACATCATAAAATTAACGTGAATACTTTTTACGCAACTGAGATGAAATGCCCGGATTGTATATACAAGGCGAAGAGGCCTCGGGATTTGTTAATACACAGGACGTTTGCTCATACGGATAGAtctgttaaaaaagttataaggctgACGTCAGTACATGACGCAGTCCCCAATAAATCTACCTCAGAACGAGGCGTGACACGTCCTAAGTTTGATGTAAAACAACCGTTACAAAAAGACCTTAAAACTACTAGGGTGACGTCAAAATATGATGCGATAGGAGATAGATCCGACTCGGAATGTGATGCAACAGCTCCCGAATTTGATTTGGAAGTACCGTCGCAAAAGGACCTTAAGAATATTCATGAGGAAGTAGAAACAGCGCAGACTGGTTTAACACATTCGTGGCTAGAATGTGAATATTGTGGAGAAAAATGTAAAGGGATGTACCAGTTAGCTTGGCATGTGTATAAAAGTCATAGcgaTAAGCCTGAAATGAGACGCCTCGAGTGCACGGTATGCTCTAGACTAGATTGCAGGCACAGATTGCAATACAAAATACCTTTCGTACAGTTTCTGAAATTTTacagagaaaaattaaaaatagaaaaggaGACCAGTGACGgcgaaaaagACTCAGTGGGAATAGTTGAAAACGTTGATAACTCggacttaaaaattaaaaaagaaactgagaaTTTCTGTGACGCACCAGGCATTAATAGCCAGTTCGTAGTTAAGGTCGAAGTAGAAGATGAAGAAATAAATGTCGACTCGCATGGTATTGAAAAATCTACCGAACATAAAATATCAGATAGTTTGAATGACAACCTACTTTTGAAAATGAAAGAAGAATTTTTTACTTGCTCCCAGTGTACCTTCGAAACGAAGCAGGAGTCCCATCTTCCACTGCACGAAATACTTGCTCATGGAGCTCCAGTCAGTGATATAAAATATCAATGCCCAGATTGCCAGTTCGAAACAAAATACAGATACAGCCTTAAACGACACTTGCGAAGTCTCCACAAATATATCATTAATGACCTTTTTACGAAAGAACAGGCTGAAACTGCAACGCGATACATAAATGATGACAATGAGGATGAGCTCATAAACGGGGCCCACAGTTATGATTGCCAACTGTGTAGTCTGCAATTTCCGGATAGATACTTGCGGGATTGGCATGTGTTTCAATTTCACAGATCTAAAGGTAGTATTCAGTTTCCAGTCAAGGTGAGAGGGATGTTAGAATGCAGTAAATGTGAATACATAGCAAGAACATGGGACTCTTTGAGGCATCATTATAAAAGGAAACATAAAATGAAAGGAACAAAGAAAAGTAACATCTCTACGTTACTTTTGGACAGTGCACTTAGTACGAGCCACGTCACAATCGAAAGAGTAGAAGATGATGAATTGAATTCTTCAGATGAAACGGAAAAGGGCGAAATTATAAGAATAGAAATAGATCCAAATAGCGATGATGAACCTGACTTAAATCACGATTTGCCTCAAAATGACGAAGAATTGGAACAAGAAGAAAAATCGTCAAATAAAGGGAATAAACGAAAGAATGAAGAATTGGAAGATTCCACAGAATCTAAGCGATGTAAGTCACCTGTTACTACCGAAAGAGATAGTGATGATGATAGTGAAGGATTATCACAAAATGAAAAAGGCTCTAAAAAGAACGAAATACTTTTCACAAAATCCAAGCAACGTGAAAAAGAGGACGATGACCTCAACGAAAATGATGATTCATTACACAGAGATGAAGAAGACAACAAAGAAGAATATACAAAAGATTCGAAACCTTCAAAAACGCACAATACAGATATATTTGCTAATGTAAGTTCCACTAAGAAGAAATGTATCCATTCAGGTTGTAACTACGAGACGTCTGATAAATGTCACTTAAGAAGACATTGTTTAGGAGTCCATAAAGACACCAGGGAGAAATTGGACTTGCTTTTCTTAGAATTGAATGATTACGAGTGCAATCTGTGCCAGTTCCAAACAATCACTCGCAGACAGATGTCTGCTCATATGATGACAAAACACGAAATGAGTAAAAGTTCCAGTGGCGACAAGTTTATTTGTCAAAAGTGCAAGGTCGTGTACAGGGATCGATATCAACGAGCGGCCCATATGTATAAGGCTCACagGACGTTACTCGGCTGTGATATGTGCGATTTTGCCGCAACCACATGGAGAGATTTAAATAGGCATATCAAGAGCCACGAACGGCCTGGTTTTATACCTTTGTATCAAATAGCCGAGAAAAAACCGAATTGTATGGTTAGAAGACAATACAGAGTGAAAGAGAAAGCAGTTCCTGTCGTTGAAGAATCGCCAAAGACTGAACCTGTTCCTGAGTCATACAGCAAAGAAGAAATAATGAACATCATCGGTCTAGTTCCTAAAATAAACGACAAACATAATGCAGAAAAGGCATTAGATGAACCAAGTATAGAACACGAAGAACATGCAAAAGTTGAAGAAGAAAATGATGAAGTTATCACAATACAGGTAACTTCAGAGGATAAAAGTACAAAAACGAAAAAGGACAGCGACACCGGAATATTAAATCCTTTCACTGGTGAATTTATAATGGAAAGTGGGGACGAAGAGCCGTTGTCAAGTGTAGAAGAACAAGTTGAGAAAACTACAGAAACATCTGTTGATACAACGGAAAGTTTTAAATGCACTCGAGCAGATTGCAAGTATTCTGCGGATACCCTCAAAAAAATCACTGATCACATCAAATCATGTACACCAAACAGttcgaaaaaaatcaaaatactgacaAAATATGCGTGTCACTTGTGTGAGGAGGTTCTGACTAATTATAACGTATTGCTAAAGCATAGCAATGCTCACGCCAAAGCTTTGAGTAATCCTAATCTTGTGGTTAAGTTTTCCGGACTCAAAAACGACAGTTGCACCTGTGAGATTGAAATTAAAGCTAATTTAGACGGCGAGaaagcagaaaataaaaaggcaGTACCTAAACAACTGGGTAAAATCTCTTACAAATGTTGGATGTGCGGTGTTGTCATTACAACAAAATTAACTTTGCAAAATCATACGAACATTCACGCTAGGGAGGACGGTAACTTCAACCTCAAAGTTAGATATTCTAAATTTCTCGACGACAAGCAACAAGGTACGATCATACTGCGCGGTGATCGAAACTATGTTCCTCGGAAAAAGAAGCAGGCGAACAGTCCGAAGCCTGAGTACGACCCCGCCCGGCCAGTGTTCAGTTGTGACGAATGCAATTTTAAGACGAATAAAAAGGAAGAGctgaaaaaacacaaaaatcttcATTGGTCGGCGGAAAAAGAAGCATTGTACAAAGCTAAGAAGTGGTATACTTGCGGCGTGTGCTTCTTTCATTGTTTCGATGTCAAGAAATTTAACGAGCACTCTGTGTGGCATAGAACACATAGTACTACTGCGGGTGGTATAAGGAAGCTGGGAAAAGATagttggtttttaaaataa
Protein Sequence: MAFDTDPDYHPDDESEDSNDDLENDADYNLEGSKDSNDYVLDEDFSKAGPSKGALSDRRETHSVTINKAKLVPKSNCVRENIIFKSTKTKRKILSCKRDNATKFWGCPQCSRTYTLKDLLDKESIPEDQVIVDKHMFYCPVCPLHEDKPKSTILERVHPSTNHLICPRCKLKISGINTLKKHLIAEHDVTLLYRCEYCEYNTSKSDSLRRHKKTHTALQKKEQIRCSHCHLEFDTIEEFKEHMKKVRWMQKRKETKMKEDGDVDGAKTDFESFALSDLDDETVNVKVLNDEDIRDDEQQSSLELLKVLNWTQSDEEEVSKISAFKDKADHNEVITIEMEESEDANEDYFKGTKLDKKQKKKEIVGRSGHDSTIRENNKEGINDDRKQESGLGCKDCDYKAQNNGHLLIHNQLIHGDLGTDNIYKCSQTSCKYTSTDRDNFRNHVTKHHKINVNTFYATEMKCPDCIYKAKRPRDLLIHRTFAHTDRSVKKVIRLTSVHDAVPNKSTSERGVTRPKFDVKQPLQKDLKTTRVTSKYDAIGDRSDSECDATAPEFDLEVPSQKDLKNIHEEVETAQTGLTHSWLECEYCGEKCKGMYQLAWHVYKSHSDKPEMRRLECTVCSRLDCRHRLQYKIPFVQFLKFYREKLKIEKETSDGEKDSVGIVENVDNSDLKIKKETENFCDAPGINSQFVVKVEVEDEEINVDSHGIEKSTEHKISDSLNDNLLLKMKEEFFTCSQCTFETKQESHLPLHEILAHGAPVSDIKYQCPDCQFETKYRYSLKRHLRSLHKYIINDLFTKEQAETATRYINDDNEDELINGAHSYDCQLCSLQFPDRYLRDWHVFQFHRSKGSIQFPVKVRGMLECSKCEYIARTWDSLRHHYKRKHKMKGTKKSNISTLLLDSALSTSHVTIERVEDDELNSSDETEKGEIIRIEIDPNSDDEPDLNHDLPQNDEELEQEEKSSNKGNKRKNEELEDSTESKRCKSPVTTERDSDDDSEGLSQNEKGSKKNEILFTKSKQREKEDDDLNENDDSLHRDEEDNKEEYTKDSKPSKTHNTDIFANVSSTKKKCIHSGCNYETSDKCHLRRHCLGVHKDTREKLDLLFLELNDYECNLCQFQTITRRQMSAHMMTKHEMSKSSSGDKFICQKCKVVYRDRYQRAAHMYKAHRTLLGCDMCDFAATTWRDLNRHIKSHERPGFIPLYQIAEKKPNCMVRRQYRVKEKAVPVVEESPKTEPVPESYSKEEIMNIIGLVPKINDKHNAEKALDEPSIEHEEHAKVEEENDEVITIQVTSEDKSTKTKKDSDTGILNPFTGEFIMESGDEEPLSSVEEQVEKTTETSVDTTESFKCTRADCKYSADTLKKITDHIKSCTPNSSKKIKILTKYACHLCEEVLTNYNVLLKHSNAHAKALSNPNLVVKFSGLKNDSCTCEIEIKANLDGEKAENKKAVPKQLGKISYKCWMCGVVITTKLTLQNHTNIHAREDGNFNLKVRYSKFLDDKQQGTIILRGDRNYVPRKKKQANSPKPEYDPARPVFSCDECNFKTNKKEELKKHKNLHWSAEKEALYKAKKWYTCGVCFFHCFDVKKFNEHSVWHRTHSTTAGGIRKLGKDSWFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -