Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020193.1:111701973-111708450[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0056 1.1 12.2 0.8 1 23 1195 1217 1195 1217 0.97

2 10 1.8 3.5e+02 4.4 6.4 1 23 1226 1248 1226 1248 0.96

3 10 6.4e-05 0.012 18.3 6.8 1 23 1257 1280 1257 1280 0.98

4 10 0.00088 0.17 14.8 0.8 1 23 1287 1309 1287 1309 0.99

5 10 0.037 7.2 9.7 3.8 1 23 1314 1336 1314 1336 0.96

6 10 0.17 33 7.6 1.3 1 23 1344 1367 1344 1367 0.95

7 10 0.00036 0.069 16.0 3.4 1 23 1407 1430 1407 1430 0.97

8 10 0.0085 1.7 11.7 4.1 1 23 1439 1462 1439 1462 0.97

9 10 0.49 95 6.1 2.0 2 23 1468 1489 1467 1489 0.96

10 10 4.3 8.4e+02 3.2 0.2 2 23 1498 1520 1497 1520 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0056	1.1	12.2	0.8	1	23	1195	1217	1195	1217	0.97
2	10	1.8	3.5e+02	4.4	6.4	1	23	1226	1248	1226	1248	0.96
3	10	6.4e-05	0.012	18.3	6.8	1	23	1257	1280	1257	1280	0.98
4	10	0.00088	0.17	14.8	0.8	1	23	1287	1309	1287	1309	0.99
5	10	0.037	7.2	9.7	3.8	1	23	1314	1336	1314	1336	0.96
6	10	0.17	33	7.6	1.3	1	23	1344	1367	1344	1367	0.95
7	10	0.00036	0.069	16.0	3.4	1	23	1407	1430	1407	1430	0.97
8	10	0.0085	1.7	11.7	4.1	1	23	1439	1462	1439	1462	0.97
9	10	0.49	95	6.1	2.0	2	23	1468	1489	1467	1489	0.96
10	10	4.3	8.4e+02	3.2	0.2	2	23	1498	1520	1497	1520	0.89

Sequence Information

Coding Sequence: ATGGATAAAATCTCCGTCGAACTAGACGCGAATCTCGTCCTCAATTATGTGGACGACGATATTGGAATTTATGAACCTGTAGGTACAGGACTGGAGTTGAGACTGGAACCGAAAAAGGACACTAGCTTCGATGAAAATCAGAACCCCAAAGATCATTCCACAGCGCCCATTACCGCggatattattaaaaaagaaaaagatttaattattgttttggaGAATGCAGTTTTAACACCAAAAAAACGGCTACCTGTTGAAGGCAGTTCTGAAGCCAACGATTTTGAAGCAGTCAGTATAGAATTTGACAGCTCACAGCCCCTAAATACTCCAAAAATTGAAAACGGTGACCTAAAAAGAAAAGTTAGATCGTCTAAGATTGCCAAAGATTCAAACAACTGGAAAACTAAGAAACTTATCGGTAAAGAAGGTTTCAAGAAGCTCAAAGAGTCTGTAGTTACCGAAGCATTAGAATTAGCTAAGCCTAAGAGAGGTAGAAAACCCAAAGCGATAGAAACTAGTAAACTGACAACTTCTAAGGTGAAAGAAAGTAAGAACAATCTTGTAAAAGTCGAACAGCAGGATGGTGTTGCAGAAGGTGAAGTTTCAATGACCCCCAAGCCTAAGAGAGGTAGACCTAAAGGAGTATCTCCTGGTAAGTTAAGCCGTTCAGTGGGAACAACCAAATTACAACCTTCTACACTaaagaaaactaagaaaaatgtaaaaattcagCAAGATGACACTGCAGCTAAACCTAAGAGAGGTAGACCTAAAGGTGCATTGTCAAAGAAAGTAGTCCATCCTCTAGTACCTAAAACCCTAGAGAATTCCAAAACTAATGACTTGGAAACTAAGGAAGTGGTCTTAAATCAGATAGGTGTCCCTGTGGAAGTCACTAAGCAACACCCTTCCAAGATTGAAAAGGTAAATTTAGCAGGCGAACAACATAATGCTCCAGCAGAATCTAAAGGTCTAGAGACTCCCAAACCTAAAAGGGGTAGGCCCAAAGGAGTTAGACAAAAGAAAGATAATATTTctgttcttaataaaaatcccCAGCACTCTAGGTCTAAAAATCTTGAGGTAGTAGGTATGGTAACTACACAATTAAATCCTTCTTTGGCAAAGAGTGATTTAGATTCTTCTAATAAAGCTATAACACTGAAGGCTCTTGGTTTAGAAGCTATAGCTATAGCAGCATCTACAGCCACTAAAGATATTCCTACCGCTCAGGTCACTAAAGTTAAAAACTTAGCTGCAAAGCCTTTGGGAACTTCTGCTGCAAGTTGTAAATATTTAGTGCCCTCTAAGGGTAGACGAGGACGACCTAAAggtttgaaaacaaataaagtGACTTTTTCAGTGAAGGGTTTGACTTCGCAAGCTAAAAAGACTGATATAATGGGTTCACAACGGGAAAAAGAACTGAATACTGATTTGAATGTAAAAGAATTAAACCTTGCTATGTCAAAGATTAACTTAACATCTCCTACAACTAAGAAAGCTGAAAATAATATCGTGGGACTCTCTAAACCTAAACAGGGTAGACCTAGAAAGAACAAAGTTAATCCTATTGCAGTAATCGTAGGTTTGGAGCTCTCCAAAACTGCAATGCCtggaatttctaaaaatttggAACCTCCTCAACCTACGGTAGTTCAAAAAAATGATTTGGTGGGAAACACACTCAATGCTTCAGGCTTATTGTCTCCCAAATCTCAGGAAACTGAGAAGCTTGCTTTAGTAAAAAATCTAACGGCACAAGAAATTAAACGATTGTATTCATTATCTTCTAAATCTAAAGCATCTAGGAAAAAACGTTCGGGTGTGGGACAGCCAAATGGTATTATTGAAACCATAGATTTGGAAGTGCCCAAAGTTAAGAGAGCTAAAGTTTTGATGCCAAAGAAAGTTAATTTTGCAGATGTAGTTATAGACTTAGAGCAGCCTAAACTTAAAGAAACTAAGAAAAGAGGTCGAAGACCAAAACAGTTAGATGTTTCAAAGAAATTAACTCCTTTAGAACCTAAGAACTCTATAGACACTGTTGTGATAGCTTCAGAAGCTAAAGAACCGGACGATGTAGCTGAAATTATAGAGTTGGAGCTTCCAAAAACGCGTGGCAGATCTAAAGAtgcaagaataaataaaattccaaCAGCAGCTGATGTACAGCCTAACAGAAACATAGAAACTATAGTTTTAGACCTTCCTAATCCTGCAAAAAGTGGCGATTCAGACGCTAAAGAACCGGATGATGTGGCTGAAATTTTAGAGTTGGGGCCTCCAAAAAAACGTGGCAGATATAAAGatacaagaataaataaagtTCGAATATCTGCTGATGTACAGCCTAACAGAAACATAGAAACTATAGTTTTAGACCTTCCTAATCCTGCAGAGAGTGGAGATTTAGAAGCTAAAGATCCAGATGATGTGGCTGAAATTATAGAGTTGGGGCCTCCAAAAAAGCAGGGCAGATCTAAAGATACAAGAATAAAAAGAGGGCGAACATCAACTGCTGTACAGCCTACCAGAAACATAGAAACTATAGTTTTAGACCTTCCTAATCCTGCAAAAAGTGTAGAGCAACCTATAGACGGTAATAACATGGAGAAACCTAAAGATGTAGAGCCTCCTAAAACTGAAGAAACTACTATGACAAATGGCGTGGCAAATCAGAGTTTAGAACCTTCTACCAGCAGAGTAGCCGATGGTAAAAGAAAGTTAGGTACTTCAGAGGGAAATAAAGATTTCATATTCACTAAACCAAAAAGAGTTAAAACGGTAAAAGCATTCTTTGCTCCTAAAGAAACCAAGCCTGCTAAATCTGAAAAAACTGAAAGTGTAGAACAGAAGCAAACAGATGCTTCTGTTGGGACTAGTGATATTGAACCTCCCAAAGTGAAAGAAGCAGAGATTGAAACTTTGCCAAAAAAACCCATATATTGTACTGTGTCAACACAAACCatggatgaggaggaggaggatatTCCTAAACTTGTAGAGGAAAAAAGTTCTGAGGAAAAAGCATCAGTTAGCTCAGTGGGTACTCAAGCTATGGAATCTTCAAAACCCAACGGAATTGAAGTGACAAGTCCAGCCAAAAGACCATCAGTTAGCTTTGCAGCTGCAGAAGTTGTTATTTTGGATGCTGCTGCGGCTAGGAATGCTGAAGGACAGAATAAGTTAGGTGCATCTATAGGGAAAAGACCTGTTGAGTTAGCTTCACctaagaaaagtaaaatttcagAGAGTCAAGACAACAAGCAAAATGATGAAGCTATAAAAGACGAAGAGGAGAGTTTAAATAATAGTGTAATACAGCCTGCACCCACTAGCAATGTTGGAGAGGATGCCCGAGAGATGGGTGTTAAATATGAATCTATGGAGCAAATCCACACGGAATTCAAGTATGAATCTCAAAGTGAGACTGAAGAGATGTTGAAAAGAAGGAGGATGTTCGGGAGGTCCATACGCGGGAGAAGGAGAGGAAAGGTGGAGGGACAAACTAAAATTGACAATTATGTTAGGATTGTAGATCTGAATGGAAAAATACAGCTGAAGTGCTACAAACAGATTTATAAATGTGAACATTGCCTATATGTAGGCAACTCCAAAGCTAACTTGGAACGTCACAGCTTGATCCACAGGAACCCGGACGAGATCATTTGGTTCCATTGCACGGAGTGCTCTTATAAGTCTAAATACGAGCACCAGTTGAAGAGTCACTTTTTGGTGCATATGAAACCCGAGCAGATCCACTTTTTCCAATGCCCACATTGCGATTTGAAATGCTCCAGAAAACATAATTTGAACAATCACATCAAAAGCATTCATACTAATAGAGAATATTCGtttaaATGTGCTGAATGCGACTACACGACTTTCTCCAAAGACCGCCTGGTGGCGCACATAAGGAAGCACTCGAACGAAGTCCACGCGTGCACTCAGTGCAAGTTTGTGACCAAGAGGAAGGAGTACCTGGAGGCCCACTTTAAGAAACATATGGAGGAGGTGCCGAGACCGTTCCCCTGTGATACATGCTCTTATAAGGGAAAGACCAAAAGGGAATTGGATAAGCATTATGATCGGATGCACAATAAGGATAATTTGCATGTTTATCAatgTAACCACTGTTCATTTAATTCCATCTACAAGAAGAACCTGGAATTCCACCTGCTTCACATGCACAACAATTCAGAAGGTTTCACGAAGTTCGTCTGCGGCCATTGCCAGAAAACTTTCGCTTACAAGAACGGCCTCAAAGTGCACATCATCCGTTGCCACATCAGATTGCCCGACGACTGTTGGCACAAGTGTCTAGAATGCAAATACAGGTCTAAAGATGTGTCTACACTAAAAAGACACATAAAGAGAAATCACGGAGCTCCGCGGCTACATTGCAAGCAGTGCAGCTTCGCCACGAATAGACAGGTGTCGATGGATGCCCACTTGAAGACTCACGAGTATGATAATGAAgatattttaaagtGCCCGGAATGTCCCTACAGAATCCTCCAGATGACATCCTTCCTCTACCACATGAAAGTGATTCACGGAAAGCCGATATTCGCGAAAGAGGCTGAACAGTATTACATGCAAGATGAGTAA
Protein Sequence: MDKISVELDANLVLNYVDDDIGIYEPVGTGLELRLEPKKDTSFDENQNPKDHSTAPITADIIKKEKDLIIVLENAVLTPKKRLPVEGSSEANDFEAVSIEFDSSQPLNTPKIENGDLKRKVRSSKIAKDSNNWKTKKLIGKEGFKKLKESVVTEALELAKPKRGRKPKAIETSKLTTSKVKESKNNLVKVEQQDGVAEGEVSMTPKPKRGRPKGVSPGKLSRSVGTTKLQPSTLKKTKKNVKIQQDDTAAKPKRGRPKGALSKKVVHPLVPKTLENSKTNDLETKEVVLNQIGVPVEVTKQHPSKIEKVNLAGEQHNAPAESKGLETPKPKRGRPKGVRQKKDNISVLNKNPQHSRSKNLEVVGMVTTQLNPSLAKSDLDSSNKAITLKALGLEAIAIAASTATKDIPTAQVTKVKNLAAKPLGTSAASCKYLVPSKGRRGRPKGLKTNKVTFSVKGLTSQAKKTDIMGSQREKELNTDLNVKELNLAMSKINLTSPTTKKAENNIVGLSKPKQGRPRKNKVNPIAVIVGLELSKTAMPGISKNLEPPQPTVVQKNDLVGNTLNASGLLSPKSQETEKLALVKNLTAQEIKRLYSLSSKSKASRKKRSGVGQPNGIIETIDLEVPKVKRAKVLMPKKVNFADVVIDLEQPKLKETKKRGRRPKQLDVSKKLTPLEPKNSIDTVVIASEAKEPDDVAEIIELELPKTRGRSKDARINKIPTAADVQPNRNIETIVLDLPNPAKSGDSDAKEPDDVAEILELGPPKKRGRYKDTRINKVRISADVQPNRNIETIVLDLPNPAESGDLEAKDPDDVAEIIELGPPKKQGRSKDTRIKRGRTSTAVQPTRNIETIVLDLPNPAKSVEQPIDGNNMEKPKDVEPPKTEETTMTNGVANQSLEPSTSRVADGKRKLGTSEGNKDFIFTKPKRVKTVKAFFAPKETKPAKSEKTESVEQKQTDASVGTSDIEPPKVKEAEIETLPKKPIYCTVSTQTMDEEEEDIPKLVEEKSSEEKASVSSVGTQAMESSKPNGIEVTSPAKRPSVSFAAAEVVILDAAAARNAEGQNKLGASIGKRPVELASPKKSKISESQDNKQNDEAIKDEEESLNNSVIQPAPTSNVGEDAREMGVKYESMEQIHTEFKYESQSETEEMLKRRRMFGRSIRGRRRGKVEGQTKIDNYVRIVDLNGKIQLKCYKQIYKCEHCLYVGNSKANLERHSLIHRNPDEIIWFHCTECSYKSKYEHQLKSHFLVHMKPEQIHFFQCPHCDLKCSRKHNLNNHIKSIHTNREYSFKCAECDYTTFSKDRLVAHIRKHSNEVHACTQCKFVTKRKEYLEAHFKKHMEEVPRPFPCDTCSYKGKTKRELDKHYDRMHNKDNLHVYQCNHCSFNSIYKKNLEFHLLHMHNNSEGFTKFVCGHCQKTFAYKNGLKVHIIRCHIRLPDDCWHKCLECKYRSKDVSTLKRHIKRNHGAPRLHCKQCSFATNRQVSMDAHLKTHEYDNEDILKCPECPYRILQMTSFLYHMKVIHGKPIFAKEAEQYYMQDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -