Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020190.1:9865022-9872492[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00012 0.022 17.5 0.4 2 23 167 189 167 189 0.97

2 21 2.2 4.2e+02 4.1 5.5 1 21 443 463 443 464 0.94

3 21 4.1 7.9e+02 3.2 7.3 1 23 493 516 493 516 0.96

4 21 5.7 1.1e+03 2.8 1.2 1 19 549 567 549 572 0.91

5 21 0.0011 0.22 14.4 1.1 2 23 662 683 661 683 0.97

6 21 2 3.9e+02 4.2 0.1 1 23 706 728 706 728 0.83

7 21 0.00044 0.085 15.7 0.4 2 23 732 753 731 753 0.96

8 21 0.0035 0.68 12.9 3.9 2 23 788 810 787 810 0.96

9 21 0.27 53 6.9 0.0 2 23 862 884 861 884 0.93

10 21 0.019 3.8 10.5 0.6 2 23 897 918 896 918 0.97

11 21 0.023 4.4 10.3 1.0 2 23 932 953 932 953 0.98

12 21 0.0018 0.36 13.8 4.4 1 23 990 1012 990 1012 0.98

13 21 1.3 2.5e+02 4.8 0.2 3 23 1033 1054 1032 1054 0.91

14 21 0.0017 0.32 13.9 0.6 1 23 1079 1101 1079 1101 0.98

15 21 0.0022 0.43 13.5 0.9 3 23 1117 1138 1115 1138 0.95

16 21 0.0045 0.87 12.5 0.5 1 23 1157 1179 1157 1179 0.91

17 21 1.3 2.6e+02 4.8 0.0 1 23 1229 1252 1229 1252 0.95

18 21 0.017 3.3 10.7 0.8 2 23 1263 1284 1263 1284 0.97

19 21 0.00014 0.028 17.2 2.1 1 23 1331 1354 1331 1354 0.96

20 21 2.2e-05 0.0043 19.8 0.7 1 23 1362 1384 1362 1384 0.98

21 21 0.00026 0.051 16.4 0.6 1 23 1410 1433 1410 1433 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00012	0.022	17.5	0.4	2	23	167	189	167	189	0.97
2	21	2.2	4.2e+02	4.1	5.5	1	21	443	463	443	464	0.94
3	21	4.1	7.9e+02	3.2	7.3	1	23	493	516	493	516	0.96
4	21	5.7	1.1e+03	2.8	1.2	1	19	549	567	549	572	0.91
5	21	0.0011	0.22	14.4	1.1	2	23	662	683	661	683	0.97
6	21	2	3.9e+02	4.2	0.1	1	23	706	728	706	728	0.83
7	21	0.00044	0.085	15.7	0.4	2	23	732	753	731	753	0.96
8	21	0.0035	0.68	12.9	3.9	2	23	788	810	787	810	0.96
9	21	0.27	53	6.9	0.0	2	23	862	884	861	884	0.93
10	21	0.019	3.8	10.5	0.6	2	23	897	918	896	918	0.97
11	21	0.023	4.4	10.3	1.0	2	23	932	953	932	953	0.98
12	21	0.0018	0.36	13.8	4.4	1	23	990	1012	990	1012	0.98
13	21	1.3	2.5e+02	4.8	0.2	3	23	1033	1054	1032	1054	0.91
14	21	0.0017	0.32	13.9	0.6	1	23	1079	1101	1079	1101	0.98
15	21	0.0022	0.43	13.5	0.9	3	23	1117	1138	1115	1138	0.95
16	21	0.0045	0.87	12.5	0.5	1	23	1157	1179	1157	1179	0.91
17	21	1.3	2.6e+02	4.8	0.0	1	23	1229	1252	1229	1252	0.95
18	21	0.017	3.3	10.7	0.8	2	23	1263	1284	1263	1284	0.97
19	21	0.00014	0.028	17.2	2.1	1	23	1331	1354	1331	1354	0.96
20	21	2.2e-05	0.0043	19.8	0.7	1	23	1362	1384	1362	1384	0.98
21	21	0.00026	0.051	16.4	0.6	1	23	1410	1433	1410	1433	0.94

Sequence Information

Coding Sequence: ATGACCGAGATGGCGGTGGATATTGAAGCTATTTGCAGGCTCTGTCTTTCAAACAGAAAGGACGCTTTGAAATCGATATTTGACGAGGTGCTTGGCCCCAATCGACTTCCACAAAAGATTGAGCAATTACTCCTGATTCAGGTCACCAAAAATGACAAAGTATCGACCATGGTATGCAACGACTGTATCATCAGACTGGACACGTGGTTTTCCTATAAGAAGCAATGCCACAGAAACCAGGCACAATTGGCAGAATGGTTGAGATCCACTGGACAAAGCATTCACGATGTGaatgttCAAATAAAGACAGAACCACTTGATATTGATGTTACCCGTCATGGTATTTTACCTGTTAAAGTGGAATATTCCATGTATGGTGATATGATGGATGAAGAATTCAATGATTTACCTCATACATTTTCTTCCTGTCCCCAAAATAGTGACCATGTCTATTTGGAGGATTTGGACAGGGACGTCCAAGAATTAGAAGAAACTGAGAAATGTCCAGACTGTGGCAAAGTGTTTGGCAGCGTGCAAAATCGCAGACGTCATCAGAACATGGTTCATAGAAGGGATAGAAGAGCCCAAATGATGGAGATTAAAAAGGTGCAACCAGAACCACCAGCTCCACCTCAAGCTGAAGAGAGTTCGGAAAAGAAACCTGACAGTACCGATGAACAAAATTCTACTCCAACTGTTGAACAACCAACTGTTGAAAATGCGGATAATTCTGTGAAAAATTTGAATGATTCTGAAAACAATACATGTACTGTAATGGATGTTACTCCTCCTCCTACAGACACATCCAAAGAAGattcaaCTGAATCACCACCTGAGCAAGCCAACACCGAAAATATGCCCCAAGAAGAGACTAATATTGAAGTTAAGGAAGAAAAACCAGCTGAAAACACAGATGAATCacaagaaaatccggaaaaaccgccTGAAACGAAAGAGGCACCTGAAGAACAACCTACAGAGGAAAAACCTGTTGATCAAAACCAAGACGGACAAAATGACCAAGACCAAAAAGACGAGAAGCCTGTCAAGACAGAGAATGACCAAGACCAAAAAGACGAGAAGCCTGTCAAGACAGAGAATGACCAGCAAAAAATCGAATTTGCAGCTGGATTAAAACTTGTGCAAAAAGATTCTACACATATTGAATTTGAAACACTATCTAAAATTGAACTTAGTTACATTGAAAAATGCAAGGCAATGGTTTCCATGTTCCACAATCTCATGTGCGCCTGTCACCATGTGCAACATAAAACTCTACGTCACCTTCTGTCACATTTAAGAGAGGTTCGAGTCTGGTTTCCGTTGTTTACCTGTTACAGTTGTATGATATCATTTACTGATAGATCTACTTTCACTCGACATCATTGTAGATGCCCAAAGGGTCAACTGGAGACCCTCATCAAATTGTCTAATCTTAGAAAACGTAGTGAAATTAAGACCCGATTGTATCAAAACTACAAGTGTAAGAGATGTAAGTTTTTGTATAGTTTTCATGAAGATTTTTGTAAACACATTAATGAAGATCACGGGCAGGGAGCACCACCCATTTATTGCTCATGTAGAAACATCTTTGATACTGTAGAAGAATACAAAACACACTGCTATACTTCCTGCGTTTTATCCTTTTACTGTGACATCTGTTTTATTACCACATCGACCATTCAGGAGTTTGTAAAACATTGTGAGGAAATTCACGATTCATCTGAAGGATTTGTTTTGCTTCAGGAAGAGTCTTCTTATACtccaagaaataatataacgtTCCGTCCAAGGGATGTTGATGAAGAAGCTAATGTCGTCGAAGGTAAAAGGGAACGTAGAAAGTCGACCAAAGAACCCATACTGGTACACATATATGACAAAGAAATTCCACCAGATCCAAAGGACATACCTAACAAAGTGTTGAAGCAGATGATGCAACTAGACTATACTACTGCACAGGAATGTAATAAAAAGCCAACAAAATGTCCTTTTTGCAAGAAAGAGTATTCCAGTGTAAATAATATGGTAAGGCATTATCGGATACACGTCGAAAGAAAAGAAGTGGAACTACCAATGGATATTGAGCAAACTGGGGACGACAATGAGGATCTTTACTCTTGCCCAGAGTGTGGTGGGATGTACCCTGCGTCCAGATGGAAAAAGCATCTTGAAGAAAAACATCAACCCATAAGTTGTACCGAGTGCGATAAAGTATTTCAATTTCAGTCTGAGTTGGATCAACATAGAAGCGTTCACTTAAACCTAAAAGTGTACAGAGATTCTAAAACGCATGCATATAAAACAGCCATTTTAAGCCCTGGCGCTGAAAGCAACGGTATGGTCGGTGAAATTATGGTGATGTGTGAAATCTGTGACAGTATGTTTAAAAGTAAGGAAGAACTAAAACATCATAAGTTGACTTGCCATGATGCTAATATGTCGCGTGCGAGTAGTTCCATGGAAAACTTTGAAATGCCAGTTGAAGATCCCGACTCCATTTTAGAACCTCCTATGGAAGTGGAAGGTGCAACAGATTCCAAAGAAAATGTAGATACTGACAGTTTGTTAGGTGAAAAACTACCCTGTGATAGTTGCGGCGGAATATACGCAAGCGCGAAAAGCCTGAAAGAGCATGTAATGAACAAACATGGGCTCgattatctaaaaaaaagcgAATACCCTAAAAAGTGCGATTACTGCGACAAAATATGTACTTCAGGTGCGGGGCTAGCTCTTCACACGCAAATTCATGAAAGGTGTCAGCCAGACAAAAAACCTGAATTCCCTAGAAAATGTGAATACTGCGACAAAATATGTACTACAGGGGCAGGTTTGTACCTCCACACCCAAATGCATGAAAGAATGACTTTGGGTGACTTAAAGAAGGAAAAAACTGTAACTGTTAAGCAAGAAGATAAAAAGAAAATCATTCAGGAAACTCAAGAAGAGGAGGACGAGTCGTATCACACTTGCAGGCGATGCTTTAAAGTGTTTGGCACTAAAGGAAAGCTGAAGGAGCACATGAAGAGTCATGGGATTAACCCTAGTAAGCCTAGCCTCAAaccgagtttaaaaaaaaatagaaaaattcttTGCGATCTTTGCCATATTGCTTTAGAAAGTAGTGAGGACTTAGTAAAACACAAAGCAGAGGAGCATAACGACGAACTTGAAGGCATGCCAACTTTGAAAAACGAATTGGAAATGGATGAAAAGAAGATGCTTGTTGTGTACACCTGTGATGTTTGCGTTCAAACGTTCGACTCAAAACTGGAGCTTCAACAGCATAAGGAAACTCACGTTAAACCTGCTATTATGCCAAAGACTAAGAAAGCtccaattttttgtaaatattgtaagaTTGCTTTTGACTCTGTTAACGAATTGACGAAACACATGCATGTAGAGCATGGTGAAAGTGCCAAACCTAGAGTGAAAAAAGAGAAATCAGATGAAAGTAagccttttaaatgccaaaTTTGTTCAAAAGCCTTTGCATCTCATGGTGCGATGACTGCTCATTTTGGCTGGCACAAACGAGCTGGTAGCACTCTTGAAGTTCCGGAGCACAGAAATACACAGCAAGCAACCGCAGCAGCTAAAATGGCCAGGAAACAGAAAGTGTCACAAAAACTTGCAAAAGCTGCAGCTAATAAGCAAGAACCAATTGAACCACCAGAATTCCAATGTGCTATTTGTTTAATGGAATTACCAAATGATACAGCTTTGCAAATTCACATGCTTGAGAAACATCGCGATTTGGACTCCCTCATGCTAATTCCAAGGTGTGATATTTGTAATCAAGATTTTGTTACTCAAGAAGAATATGATACTCACAAGCGATTCCATGATTTCCTGAATAGGCAAAAGAAACACGAAGAACAGCTTCAAGCTCAACAGCAAACGCTTGTACAACAACAGATTAAAACACCCATTATACAGAGCGTGCAGAGCGTCTCGGAATCACCTCAGGCCAGTCCCAAGAGGCACCCGTGTAACTGGTGTAATTCCGTCTTTAGTAGAAGCGATACTTTGAACGCTCACATTAGACACAACCATAAAGAACACGTCAAGACAGAGTTTGAATGTACTCAGTGCGACAGGGTGTTTGATAAACAAAATTCGTTAACTATTCATCTAAAAGTGCACGAAAAACAAAAGAATGCAGGTGCAAGTAGCACAATGGTAGTAGCGGGTAATGGTGTAAGTGGAGGGGGAAAAATCTATTCCTGTTCAATTTGCAACCAAGTCTTTAAGTTCCCTAAAGACCTAAGAATGCACACCATCAATGACCATCCGTTCTAA
Protein Sequence: MTEMAVDIEAICRLCLSNRKDALKSIFDEVLGPNRLPQKIEQLLLIQVTKNDKVSTMVCNDCIIRLDTWFSYKKQCHRNQAQLAEWLRSTGQSIHDVNVQIKTEPLDIDVTRHGILPVKVEYSMYGDMMDEEFNDLPHTFSSCPQNSDHVYLEDLDRDVQELEETEKCPDCGKVFGSVQNRRRHQNMVHRRDRRAQMMEIKKVQPEPPAPPQAEESSEKKPDSTDEQNSTPTVEQPTVENADNSVKNLNDSENNTCTVMDVTPPPTDTSKEDSTESPPEQANTENMPQEETNIEVKEEKPAENTDESQENPEKPPETKEAPEEQPTEEKPVDQNQDGQNDQDQKDEKPVKTENDQDQKDEKPVKTENDQQKIEFAAGLKLVQKDSTHIEFETLSKIELSYIEKCKAMVSMFHNLMCACHHVQHKTLRHLLSHLREVRVWFPLFTCYSCMISFTDRSTFTRHHCRCPKGQLETLIKLSNLRKRSEIKTRLYQNYKCKRCKFLYSFHEDFCKHINEDHGQGAPPIYCSCRNIFDTVEEYKTHCYTSCVLSFYCDICFITTSTIQEFVKHCEEIHDSSEGFVLLQEESSYTPRNNITFRPRDVDEEANVVEGKRERRKSTKEPILVHIYDKEIPPDPKDIPNKVLKQMMQLDYTTAQECNKKPTKCPFCKKEYSSVNNMVRHYRIHVERKEVELPMDIEQTGDDNEDLYSCPECGGMYPASRWKKHLEEKHQPISCTECDKVFQFQSELDQHRSVHLNLKVYRDSKTHAYKTAILSPGAESNGMVGEIMVMCEICDSMFKSKEELKHHKLTCHDANMSRASSSMENFEMPVEDPDSILEPPMEVEGATDSKENVDTDSLLGEKLPCDSCGGIYASAKSLKEHVMNKHGLDYLKKSEYPKKCDYCDKICTSGAGLALHTQIHERCQPDKKPEFPRKCEYCDKICTTGAGLYLHTQMHERMTLGDLKKEKTVTVKQEDKKKIIQETQEEEDESYHTCRRCFKVFGTKGKLKEHMKSHGINPSKPSLKPSLKKNRKILCDLCHIALESSEDLVKHKAEEHNDELEGMPTLKNELEMDEKKMLVVYTCDVCVQTFDSKLELQQHKETHVKPAIMPKTKKAPIFCKYCKIAFDSVNELTKHMHVEHGESAKPRVKKEKSDESKPFKCQICSKAFASHGAMTAHFGWHKRAGSTLEVPEHRNTQQATAAAKMARKQKVSQKLAKAAANKQEPIEPPEFQCAICLMELPNDTALQIHMLEKHRDLDSLMLIPRCDICNQDFVTQEEYDTHKRFHDFLNRQKKHEEQLQAQQQTLVQQQIKTPIIQSVQSVSESPQASPKRHPCNWCNSVFSRSDTLNAHIRHNHKEHVKTEFECTQCDRVFDKQNSLTIHLKVHEKQKNAGASSTMVVAGNGVSGGGKIYSCSICNQVFKFPKDLRMHTINDHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -